RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 OXLD1Q5BKU9 147 aa10.58□□□□□ -0.72
CTSD-201ENST00000236671 C9orf153Q5TBE3 101 aa10.58□□□□□ -0.72
CTSD-201ENST00000236671 Q8NDZ9 215 aa10.58□□□□□ -0.72
CTSD-201ENST00000236671 LINC00526Q96FQ7 95 aa10.58□□□□□ -0.72
CTSD-201ENST00000236671 PRKDCP78527 4128 aaKnown RBP10.58□□□□□ -0.72
CTSD-201ENST00000236671 IGKV3D-7A0A0C4DH55 119 aa10.58□□□□□ -0.72
CTSD-201ENST00000236671 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
CTSD-201ENST00000236671 CCKP06307 115 aa10.57□□□□□ -0.72
CTSD-201ENST00000236671 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
CTSD-201ENST00000236671 ATOX1O00244 68 aa10.56□□□□□ -0.72
CTSD-201ENST00000236671 COX7CP15954 63 aa10.56□□□□□ -0.72
CTSD-201ENST00000236671 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
CTSD-201ENST00000236671 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
CTSD-201ENST00000236671 DAD1P61803 113 aa10.54□□□□□ -0.72
CTSD-201ENST00000236671 RPL18AQ02543 176 aaKnown RBP10.54□□□□□ -0.72
CTSD-201ENST00000236671 C9orf66Q5T8R8 295 aa10.54□□□□□ -0.72
CTSD-201ENST00000236671 PRB2P02812 416 aaPredicted RBP10.54□□□□□ -0.72
CTSD-201ENST00000236671 C6orf99Q4VX62 202 aa10.54□□□□□ -0.72
CTSD-201ENST00000236671 CELA1Q9UNI1 258 aa10.54□□□□□ -0.72
CTSD-201ENST00000236671 COL7A1Q02388 2944 aa10.53□□□□□ -0.72
CTSD-201ENST00000236671 C10orf25Q5T742 122 aa10.52□□□□□ -0.72
CTSD-201ENST00000236671 C6orf223Q8N319 242 aa10.52□□□□□ -0.72
CTSD-201ENST00000236671 A0A087WVE0 104 aa10.52□□□□□ -0.73
CTSD-201ENST00000236671 APOC4P55056 127 aa10.52□□□□□ -0.73
CTSD-201ENST00000236671 FBN3Q75N90 2809 aa10.52□□□□□ -0.73
CTSD-201ENST00000236671 SPAG11BQ08648 103 aa10.51□□□□□ -0.73
CTSD-201ENST00000236671 Q8NAQ8 132 aa10.51□□□□□ -0.73
CTSD-201ENST00000236671 UNQ6190/PRO20217Q6UXQ8 127 aa10.51□□□□□ -0.73
CTSD-201ENST00000236671 TGP01266 2768 aa10.5□□□□□ -0.73
CTSD-201ENST00000236671 S100A7L2Q5SY68 101 aa10.5□□□□□ -0.73
CTSD-201ENST00000236671 LINC00575Q6W349 94 aa10.5□□□□□ -0.73
CTSD-201ENST00000236671 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
CTSD-201ENST00000236671 CRYGAP11844 174 aa10.49□□□□□ -0.73
CTSD-201ENST00000236671 LELP1Q5T871 98 aa10.49□□□□□ -0.73
CTSD-201ENST00000236671 A0A0J9YWU9 116 aa10.49□□□□□ -0.73
CTSD-201ENST00000236671 IGHV4-30-4P0DP06 118 aa10.49□□□□□ -0.73
CTSD-201ENST00000236671 MUC7Q8TAX7 377 aa10.49□□□□□ -0.73
CTSD-201ENST00000236671 MIFP14174 115 aa10.48□□□□□ -0.73
CTSD-201ENST00000236671 KRTAP10-11P60412 298 aa10.48□□□□□ -0.73
CTSD-201ENST00000236671 PRR34Q9NV39 138 aa10.48□□□□□ -0.73
CTSD-201ENST00000236671 USP17L23D6RBM5 183 aa10.46□□□□□ -0.73
CTSD-201ENST00000236671 IGLV6-57P01721 117 aa10.46□□□□□ -0.73
CTSD-201ENST00000236671 HTN3P15516 51 aa10.46□□□□□ -0.74
CTSD-201ENST00000236671 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
CTSD-201ENST00000236671 ATP5EP2Q5VTU8 51 aa10.45□□□□□ -0.74
CTSD-201ENST00000236671 SERP2Q8N6R1 65 aa10.45□□□□□ -0.74
CTSD-201ENST00000236671 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
CTSD-201ENST00000236671 hADV29S1A0JD25 119 aa10.45□□□□□ -0.74
CTSD-201ENST00000236671 LYPD5Q6UWN5 251 aa10.45□□□□□ -0.74
CTSD-201ENST00000236671 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
CTSD-201ENST00000236671 CYSTM1Q9H1C7 97 aa10.44□□□□□ -0.74
CTSD-201ENST00000236671 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
CTSD-201ENST00000236671 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
CTSD-201ENST00000236671 TENM3Q9P273 2699 aa10.42□□□□□ -0.74
CTSD-201ENST00000236671 Q6ZQT0 140 aa10.42□□□□□ -0.74
CTSD-201ENST00000236671 UPK3BQ9BT76 320 aa10.42□□□□□ -0.74
CTSD-201ENST00000236671 C6orf48Q9UBA6 75 aa10.42□□□□□ -0.74
CTSD-201ENST00000236671 LOC110117498A0A087WWA1 95 aa10.41□□□□□ -0.74
CTSD-201ENST00000236671 RBM3P98179 157 aaKnown RBP10.41□□□□□ -0.74
CTSD-201ENST00000236671 UBL5Q9BZL1 73 aa10.4□□□□□ -0.74
CTSD-201ENST00000236671 TRBV10-3A0A0K0K1G6 114 aa10.39□□□□□ -0.75
CTSD-201ENST00000236671 FAM19A1Q7Z5A9 133 aa10.39□□□□□ -0.75
CTSD-201ENST00000236671 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
CTSD-201ENST00000236671 Q6ZQY7 126 aa10.38□□□□□ -0.75
CTSD-201ENST00000236671 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
CTSD-201ENST00000236671 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
CTSD-201ENST00000236671 DNAH9Q9NYC9 4486 aa10.37□□□□□ -0.75
CTSD-201ENST00000236671 M0R2N4 97 aa10.37□□□□□ -0.75
CTSD-201ENST00000236671 WIPF1O43516 503 aa10.37□□□□□ -0.75
CTSD-201ENST00000236671 EGFEM1PQ0D2K5 195 aa10.37□□□□□ -0.75
CTSD-201ENST00000236671 DIRC1Q969H9 104 aa10.36□□□□□ -0.75
CTSD-201ENST00000236671 GHRHP01286 108 aa10.35□□□□□ -0.75
CTSD-201ENST00000236671 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
CTSD-201ENST00000236671 LOC107984640A0A0U1RRK4 108 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 H3BQ85 93 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 ZNF73O43830 326 aaPredicted RBP10.33□□□□□ -0.76
CTSD-201ENST00000236671 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 J3KT08 172 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 K7EIL1 84 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 TMEM258P61165 79 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 KRTAP26-1Q6PEX3 210 aa10.33□□□□□ -0.76
CTSD-201ENST00000236671 HIGD2BQ4VC39 106 aa10.32□□□□□ -0.76
CTSD-201ENST00000236671 KPRPQ5T749 579 aaPredicted RBP10.32□□□□□ -0.76
CTSD-201ENST00000236671 VPREB1P12018 145 aa10.31□□□□□ -0.76
CTSD-201ENST00000236671 COX7BP24311 80 aa10.31□□□□□ -0.76
CTSD-201ENST00000236671 ELOF1P60002 83 aaKnown RBP10.31□□□□□ -0.76
CTSD-201ENST00000236671 PDE6GP18545 87 aa10.31□□□□□ -0.76
CTSD-201ENST00000236671 LINC01547P58512 204 aaPredicted RBP10.31□□□□□ -0.76
CTSD-201ENST00000236671 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
CTSD-201ENST00000236671 Q6ZVQ6 151 aa10.31□□□□□ -0.76
CTSD-201ENST00000236671 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
CTSD-201ENST00000236671 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
CTSD-201ENST00000236671 TRBV7-6A0A0J9YX20 115 aa10.29□□□□□ -0.76
CTSD-201ENST00000236671 RPS28P62857 69 aaKnown RBP10.28□□□□□ -0.76
CTSD-201ENST00000236671 MRAPQ8TCY5 172 aa10.28□□□□□ -0.76
CTSD-201ENST00000236671 TRBV7-4A0A0J9YYF1 115 aa10.28□□□□□ -0.76
CTSD-201ENST00000236671 H3BNG1 76 aa10.28□□□□□ -0.76
CTSD-201ENST00000236671 Q6ZRU5 148 aa10.28□□□□□ -0.76
CTSD-201ENST00000236671 C15orf56Q8N910 161 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms