RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
PCOLCE-201ENST00000223061 CIRBPQ14011 172 aaKnown RBP9.35□□□□□ -0.91
PCOLCE-201ENST00000223061 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
PCOLCE-201ENST00000223061 Q5VSD8 79 aa9.35□□□□□ -0.91
PCOLCE-201ENST00000223061 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
PCOLCE-201ENST00000223061 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
PCOLCE-201ENST00000223061 CKS1BP61024 79 aa9.34□□□□□ -0.91
PCOLCE-201ENST00000223061 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
PCOLCE-201ENST00000223061 Q8IZM0 81 aa9.34□□□□□ -0.91
PCOLCE-201ENST00000223061 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
PCOLCE-201ENST00000223061 A0A087WYN8 130 aa9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 FAM229AH3BQW9 127 aa9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 RPL18AQ02543 176 aaKnown RBP9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 RNF151Q2KHN1 245 aa9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 GTF2H5Q6ZYL4 71 aa9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 NHP2Q9NX24 153 aaKnown RBP9.34□□□□□ -0.92
PCOLCE-201ENST00000223061 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
PCOLCE-201ENST00000223061 A0A1W2PPM0 123 aa9.33□□□□□ -0.92
PCOLCE-201ENST00000223061 A6NJY4 79 aa9.33□□□□□ -0.92
PCOLCE-201ENST00000223061 H3BUT2 72 aa9.33□□□□□ -0.92
PCOLCE-201ENST00000223061 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
PCOLCE-201ENST00000223061 COX7B2Q8TF08 81 aa9.32□□□□□ -0.92
PCOLCE-201ENST00000223061 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
PCOLCE-201ENST00000223061 LINC00474Q9P2X8 69 aa9.32□□□□□ -0.92
PCOLCE-201ENST00000223061 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
PCOLCE-201ENST00000223061 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
PCOLCE-201ENST00000223061 K7EP34 96 aa9.31□□□□□ -0.92
PCOLCE-201ENST00000223061 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCOLCE-201ENST00000223061 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
PCOLCE-201ENST00000223061 FABP2P12104 132 aa9.3□□□□□ -0.92
PCOLCE-201ENST00000223061 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
PCOLCE-201ENST00000223061 K7ERJ3 54 aa9.28□□□□□ -0.92
PCOLCE-201ENST00000223061 CXCL5P42830 114 aa9.28□□□□□ -0.92
PCOLCE-201ENST00000223061 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
PCOLCE-201ENST00000223061 Q6ZRP5 223 aa9.28□□□□□ -0.92
PCOLCE-201ENST00000223061 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
PCOLCE-201ENST00000223061 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
PCOLCE-201ENST00000223061 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
PCOLCE-201ENST00000223061 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
PCOLCE-201ENST00000223061 SPCS1Q9Y6A9 102 aa9.27□□□□□ -0.93
PCOLCE-201ENST00000223061 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
PCOLCE-201ENST00000223061 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
PCOLCE-201ENST00000223061 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
PCOLCE-201ENST00000223061 PCLOQ9Y6V0 5065 aa9.26□□□□□ -0.93
PCOLCE-201ENST00000223061 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
PCOLCE-201ENST00000223061 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
PCOLCE-201ENST00000223061 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
PCOLCE-201ENST00000223061 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
PCOLCE-201ENST00000223061 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
PCOLCE-201ENST00000223061 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 TIMM17BO60830 172 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 C7orf33Q8WU49 177 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 RPL24P83731 157 aaKnown RBP9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 SPANXDQ9BXN6 97 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 SPANXCQ9NY87 97 aa9.22□□□□□ -0.93
PCOLCE-201ENST00000223061 FAM19A5Q7Z5A7 132 aaPredicted RBP9.21□□□□□ -0.94
PCOLCE-201ENST00000223061 LITAFQ99732 161 aa9.21□□□□□ -0.94
PCOLCE-201ENST00000223061 XAGE1AQ9HD64 81 aa9.21□□□□□ -0.94
PCOLCE-201ENST00000223061 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
PCOLCE-201ENST00000223061 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
PCOLCE-201ENST00000223061 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
PCOLCE-201ENST00000223061 CFC1P0CG37 223 aa9.19□□□□□ -0.94
PCOLCE-201ENST00000223061 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
PCOLCE-201ENST00000223061 A0A0B4J2C4 111 aa9.19□□□□□ -0.94
PCOLCE-201ENST00000223061 PFN2P35080 140 aa9.19□□□□□ -0.94
PCOLCE-201ENST00000223061 LYRM7Q5U5X0 104 aa9.19□□□□□ -0.94
PCOLCE-201ENST00000223061 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
PCOLCE-201ENST00000223061 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
PCOLCE-201ENST00000223061 PRO1854Q9UHT4 67 aa9.18□□□□□ -0.94
PCOLCE-201ENST00000223061 A4D1N5 150 aa9.17□□□□□ -0.94
PCOLCE-201ENST00000223061 TSPAN13O95857 204 aa9.17□□□□□ -0.94
PCOLCE-201ENST00000223061 IFITM1P13164 125 aa9.17□□□□□ -0.94
PCOLCE-201ENST00000223061 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
PCOLCE-201ENST00000223061 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
PCOLCE-201ENST00000223061 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
PCOLCE-201ENST00000223061 F8W1H4 67 aa9.16□□□□□ -0.94
PCOLCE-201ENST00000223061 M0QXV9 152 aa9.15□□□□□ -0.94
PCOLCE-201ENST00000223061 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
PCOLCE-201ENST00000223061 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
PCOLCE-201ENST00000223061 HERV-K104P63124 156 aa9.14□□□□□ -0.95
PCOLCE-201ENST00000223061 PRR3P79522 188 aaKnown RBP9.14□□□□□ -0.95
PCOLCE-201ENST00000223061 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
PCOLCE-201ENST00000223061 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
PCOLCE-201ENST00000223061 K7ERU9 68 aa9.14□□□□□ -0.95
PCOLCE-201ENST00000223061 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
PCOLCE-201ENST00000223061 TRBV20-1A0A075B6N2 111 aa9.13□□□□□ -0.95
PCOLCE-201ENST00000223061 COX17Q14061 63 aa9.13□□□□□ -0.95
PCOLCE-201ENST00000223061 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
PCOLCE-201ENST00000223061 LINC00158P58513 81 aa9.12□□□□□ -0.95
PCOLCE-201ENST00000223061 H3BMG7 143 aa9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 MYCBP2O75592 4640 aa9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 UBE2BP63146 152 aa9.11□□□□□ -0.95
PCOLCE-201ENST00000223061 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms