RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 JMJD1CQ15652 2540 aa9.4□□□□□ -0.9
TGFBR3-201ENST00000212355 LINC00167Q96N53 147 aa9.4□□□□□ -0.91
TGFBR3-201ENST00000212355 MDFIQ99750 246 aa9.39□□□□□ -0.91
TGFBR3-201ENST00000212355 SPAG11AQ6PDA7 123 aa9.38□□□□□ -0.91
TGFBR3-201ENST00000212355 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
TGFBR3-201ENST00000212355 FN1P02751 2386 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-201ENST00000212355 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
TGFBR3-201ENST00000212355 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
TGFBR3-201ENST00000212355 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
TGFBR3-201ENST00000212355 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
TGFBR3-201ENST00000212355 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
TGFBR3-201ENST00000212355 ZFYVE26Q68DK2 2539 aa9.31□□□□□ -0.92
TGFBR3-201ENST00000212355 PCSK5Q92824 1860 aa9.31□□□□□ -0.92
TGFBR3-201ENST00000212355 MYO9AB2RTY4 2548 aa9.3□□□□□ -0.92
TGFBR3-201ENST00000212355 LRRK2Q5S007 2527 aa9.3□□□□□ -0.92
TGFBR3-201ENST00000212355 PRO0461Q9UI25 63 aa9.3□□□□□ -0.92
TGFBR3-201ENST00000212355 TLN2Q9Y4G6 2542 aa9.3□□□□□ -0.92
TGFBR3-201ENST00000212355 A0A0G2JQZ4 141 aa9.3□□□□□ -0.92
TGFBR3-201ENST00000212355 A0A1W2PNN7 141 aa9.3□□□□□ -0.92
TGFBR3-201ENST00000212355 COL4A2P08572 1712 aa9.29□□□□□ -0.92
TGFBR3-201ENST00000212355 hDV103S1A0JD37 113 aa9.29□□□□□ -0.92
TGFBR3-201ENST00000212355 CXCL6P80162 114 aa9.29□□□□□ -0.92
TGFBR3-201ENST00000212355 LINC00476Q8WZB0 136 aa9.28□□□□□ -0.92
TGFBR3-201ENST00000212355 SETD2Q9BYW2 2564 aaPredicted RBP9.28□□□□□ -0.92
TGFBR3-201ENST00000212355 ABCA12Q86UK0 2595 aa9.27□□□□□ -0.93
TGFBR3-201ENST00000212355 TLN1Q9Y490 2541 aaKnown RBP9.27□□□□□ -0.93
TGFBR3-201ENST00000212355 Q6ZQT0 140 aa9.26□□□□□ -0.93
TGFBR3-201ENST00000212355 A0A1B0GU69 56 aa9.26□□□□□ -0.93
TGFBR3-201ENST00000212355 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
TGFBR3-201ENST00000212355 ELOF1P60002 83 aaKnown RBP9.24□□□□□ -0.93
TGFBR3-201ENST00000212355 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
TGFBR3-201ENST00000212355 Q6ZRP5 223 aa9.24□□□□□ -0.93
TGFBR3-201ENST00000212355 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
TGFBR3-201ENST00000212355 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
TGFBR3-201ENST00000212355 RTL8CO15255 209 aa9.22□□□□□ -0.93
TGFBR3-201ENST00000212355 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
TGFBR3-201ENST00000212355 LINC01561Q8N1V8 128 aa9.21□□□□□ -0.93
TGFBR3-201ENST00000212355 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.94
TGFBR3-201ENST00000212355 LIMD2Q9BT23 127 aa9.2□□□□□ -0.94
TGFBR3-201ENST00000212355 PIEZO1Q92508 2521 aa9.19□□□□□ -0.94
TGFBR3-201ENST00000212355 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
TGFBR3-201ENST00000212355 MKI67P46013 3256 aaKnown RBP9.19□□□□□ -0.94
TGFBR3-201ENST00000212355 Q6ZRX8 168 aa9.19□□□□□ -0.94
TGFBR3-201ENST00000212355 Q96NJ1 140 aa9.18□□□□□ -0.94
TGFBR3-201ENST00000212355 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
TGFBR3-201ENST00000212355 K7EQZ3 153 aa9.17□□□□□ -0.94
TGFBR3-201ENST00000212355 LITAFQ99732 161 aa9.17□□□□□ -0.94
TGFBR3-201ENST00000212355 DNAH10OSP0CZ25 163 aa9.17□□□□□ -0.94
TGFBR3-201ENST00000212355 Q8NAQ8 132 aa9.17□□□□□ -0.94
TGFBR3-201ENST00000212355 LINC00313P59037 77 aa9.16□□□□□ -0.94
TGFBR3-201ENST00000212355 F8WDY8 70 aa9.16□□□□□ -0.94
TGFBR3-201ENST00000212355 ZNF462Q96JM2 2506 aa9.16□□□□□ -0.94
TGFBR3-201ENST00000212355 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.95
TGFBR3-201ENST00000212355 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
TGFBR3-201ENST00000212355 ACYP2P14621 99 aa9.14□□□□□ -0.95
TGFBR3-201ENST00000212355 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
TGFBR3-201ENST00000212355 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
TGFBR3-201ENST00000212355 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-201ENST00000212355 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
TGFBR3-201ENST00000212355 PRO0628Q9UI54 55 aa9.12□□□□□ -0.95
TGFBR3-201ENST00000212355 Q8NBF4 154 aa9.12□□□□□ -0.95
TGFBR3-201ENST00000212355 XIRP2A4UGR9 3374 aa9.11□□□□□ -0.95
TGFBR3-201ENST00000212355 BRCA2P51587 3418 aa9.11□□□□□ -0.95
TGFBR3-201ENST00000212355 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
TGFBR3-201ENST00000212355 CHD8Q9HCK8 2581 aa9.1□□□□□ -0.95
TGFBR3-201ENST00000212355 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
TGFBR3-201ENST00000212355 SPTBN4Q9H254 2564 aa9.1□□□□□ -0.95
TGFBR3-201ENST00000212355 C16orf90A8MZG2 172 aa9.1□□□□□ -0.95
TGFBR3-201ENST00000212355 DSCR10P59022 87 aa9.09□□□□□ -0.95
TGFBR3-201ENST00000212355 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
TGFBR3-201ENST00000212355 POLQO75417 2590 aa9.09□□□□□ -0.95
TGFBR3-201ENST00000212355 PRRC2CQ9Y520 2896 aaKnown RBP9.09□□□□□ -0.95
TGFBR3-201ENST00000212355 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.96
TGFBR3-201ENST00000212355 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
TGFBR3-201ENST00000212355 A8MUN3 132 aa9.08□□□□□ -0.96
TGFBR3-201ENST00000212355 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
TGFBR3-201ENST00000212355 VPREB1P12018 145 aa9.07□□□□□ -0.96
TGFBR3-201ENST00000212355 ANKRD17O75179 2603 aaKnown RBP9.07□□□□□ -0.96
TGFBR3-201ENST00000212355 CEP295Q9C0D2 2601 aa9.07□□□□□ -0.96
TGFBR3-201ENST00000212355 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
TGFBR3-201ENST00000212355 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
TGFBR3-201ENST00000212355 PKD1L2Q7Z442 2459 aa9.05□□□□□ -0.96
TGFBR3-201ENST00000212355 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
TGFBR3-201ENST00000212355 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
TGFBR3-201ENST00000212355 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
TGFBR3-201ENST00000212355 BPTFQ12830 3046 aa9.03□□□□□ -0.96
TGFBR3-201ENST00000212355 BCE1O60756 84 aa9.03□□□□□ -0.96
TGFBR3-201ENST00000212355 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
TGFBR3-201ENST00000212355 GVQW2A0A096LPI5 108 aaPredicted RBP9.03□□□□□ -0.96
TGFBR3-201ENST00000212355 SSBP3-AS1Q7Z2R9 100 aa9.02□□□□□ -0.96
TGFBR3-201ENST00000212355 COA5Q86WW8 74 aa9.02□□□□□ -0.97
TGFBR3-201ENST00000212355 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
TGFBR3-201ENST00000212355 CFAP54Q96N23 3096 aa9.01□□□□□ -0.97
TGFBR3-201ENST00000212355 CASC10Q5T4H9 136 aa9□□□□□ -0.97
TGFBR3-201ENST00000212355 CSNK1G2-AS1Q8NCQ2 148 aa9□□□□□ -0.97
TGFBR3-201ENST00000212355 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
TGFBR3-201ENST00000212355 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
TGFBR3-201ENST00000212355 USP9YO00507 2555 aaPredicted RBP9□□□□□ -0.97
TGFBR3-201ENST00000212355 A0A0C4DFX4 3053 aa8.99□□□□□ -0.97
TGFBR3-201ENST00000212355 APLNQ9ULZ1 77 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms