RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PCOTHQ58A44 107 aa13.03□□□□□ -0.32
MBD3-201ENST00000156825 MDFIQ99750 246 aa13.03□□□□□ -0.32
MBD3-201ENST00000156825 COL4A2P08572 1712 aa13.03□□□□□ -0.32
MBD3-201ENST00000156825 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
MBD3-201ENST00000156825 A6NED7 52 aa13.02□□□□□ -0.32
MBD3-201ENST00000156825 SOSTDC1Q6X4U4 206 aa13.02□□□□□ -0.33
MBD3-201ENST00000156825 Q6ZVQ6 151 aa13.01□□□□□ -0.33
MBD3-201ENST00000156825 SMCR5Q8TEV8 140 aa13.01□□□□□ -0.33
MBD3-201ENST00000156825 TRAV7A0A075B6U4 112 aa13□□□□□ -0.33
MBD3-201ENST00000156825 PRYO14603 147 aa13□□□□□ -0.33
MBD3-201ENST00000156825 PCSK5Q92824 1860 aa13□□□□□ -0.33
MBD3-201ENST00000156825 C6orf48Q9UBA6 75 aa12.99□□□□□ -0.33
MBD3-201ENST00000156825 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
MBD3-201ENST00000156825 KIAA0087Q14695 138 aa12.96□□□□□ -0.33
MBD3-201ENST00000156825 FLNAP21333 2647 aaKnown RBP12.96□□□□□ -0.33
MBD3-201ENST00000156825 LINC01561Q8N1V8 128 aa12.96□□□□□ -0.34
MBD3-201ENST00000156825 LINC00167Q96N53 147 aa12.96□□□□□ -0.34
MBD3-201ENST00000156825 SERP1Q9Y6X1 66 aa12.95□□□□□ -0.34
MBD3-201ENST00000156825 LINC01546A6NGU7 62 aa12.95□□□□□ -0.34
MBD3-201ENST00000156825 K7ERS5 55 aa12.95□□□□□ -0.34
MBD3-201ENST00000156825 SPINK1P00995 79 aa12.94□□□□□ -0.34
MBD3-201ENST00000156825 ATP5EP56381 51 aaPredicted RBP12.94□□□□□ -0.34
MBD3-201ENST00000156825 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
MBD3-201ENST00000156825 PRR15LQ9BU68 103 aa12.93□□□□□ -0.34
MBD3-201ENST00000156825 NHLRC4P0CG21 123 aaPredicted RBP12.92□□□□□ -0.34
MBD3-201ENST00000156825 F8WDY8 70 aa12.91□□□□□ -0.34
MBD3-201ENST00000156825 ITPR3Q14573 2671 aa12.91□□□□□ -0.34
MBD3-201ENST00000156825 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
MBD3-201ENST00000156825 CFAP46Q8IYW2 2715 aa12.91□□□□□ -0.34
MBD3-201ENST00000156825 TRBV7-6A0A0J9YX20 115 aa12.91□□□□□ -0.34
MBD3-201ENST00000156825 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
MBD3-201ENST00000156825 V9GYY9 64 aa12.9□□□□□ -0.35
MBD3-201ENST00000156825 SMCPP49901 116 aaPredicted RBP12.89□□□□□ -0.35
MBD3-201ENST00000156825 Q8NAQ8 132 aa12.89□□□□□ -0.35
MBD3-201ENST00000156825 CDIP1Q9H305 208 aa12.88□□□□□ -0.35
MBD3-201ENST00000156825 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
MBD3-201ENST00000156825 SPATA3Q8NHX4 192 aa12.87□□□□□ -0.35
MBD3-201ENST00000156825 UNC80Q8N2C7 3258 aa12.87□□□□□ -0.35
MBD3-201ENST00000156825 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
MBD3-201ENST00000156825 FSHBP01225 129 aa12.87□□□□□ -0.35
MBD3-201ENST00000156825 H0Y9P7 68 aa12.87□□□□□ -0.35
MBD3-201ENST00000156825 HCG22E2RYF7 251 aa12.86□□□□□ -0.35
MBD3-201ENST00000156825 HTTP42858 3142 aa12.86□□□□□ -0.35
MBD3-201ENST00000156825 PHF5AQ7RTV0 110 aaKnown RBP12.86□□□□□ -0.35
MBD3-201ENST00000156825 TRBV7-7A0A0K0K1E9 115 aa12.85□□□□□ -0.35
MBD3-201ENST00000156825 MOBPQ13875 183 aa12.84□□□□□ -0.35
MBD3-201ENST00000156825 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
MBD3-201ENST00000156825 TMEM254Q8TBM7 123 aa12.84□□□□□ -0.35
MBD3-201ENST00000156825 SMIM26A0A096LP01 95 aa12.83□□□□□ -0.36
MBD3-201ENST00000156825 PRUNE2Q8WUY3 3088 aa12.83□□□□□ -0.36
MBD3-201ENST00000156825 CHTF8P0CG12 524 aa12.83□□□□□ -0.36
MBD3-201ENST00000156825 SPACA4Q8TDM5 124 aa12.82□□□□□ -0.36
MBD3-201ENST00000156825 PSPHP1O15172 72 aa12.81□□□□□ -0.36
MBD3-201ENST00000156825 ST20-AS1Q8NBB2 130 aa12.79□□□□□ -0.36
MBD3-201ENST00000156825 SMIM29Q86T20 159 aa12.79□□□□□ -0.36
MBD3-201ENST00000156825 IGKV2D-30A0A075B6S6 120 aa12.79□□□□□ -0.36
MBD3-201ENST00000156825 IGKV2-30P06310 120 aa12.79□□□□□ -0.36
MBD3-201ENST00000156825 CHD9Q3L8U1 2897 aa12.78□□□□□ -0.36
MBD3-201ENST00000156825 MGAQ8IWI9 3026 aa12.78□□□□□ -0.36
MBD3-201ENST00000156825 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.36
MBD3-201ENST00000156825 XIRP2A4UGR9 3374 aa12.77□□□□□ -0.37
MBD3-201ENST00000156825 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
MBD3-201ENST00000156825 H3BNG1 76 aa12.76□□□□□ -0.37
MBD3-201ENST00000156825 PRO0461Q9UI25 63 aa12.75□□□□□ -0.37
MBD3-201ENST00000156825 NBDYA0A0U1RRE5 68 aa12.75□□□□□ -0.37
MBD3-201ENST00000156825 ELOF1P60002 83 aaKnown RBP12.73□□□□□ -0.37
MBD3-201ENST00000156825 Q6ZRP5 223 aa12.73□□□□□ -0.37
MBD3-201ENST00000156825 C1orf64Q8NEQ6 169 aa12.73□□□□□ -0.37
MBD3-201ENST00000156825 FAM168BA1KXE4 195 aa12.72□□□□□ -0.37
MBD3-201ENST00000156825 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
MBD3-201ENST00000156825 RTL8CO15255 209 aa12.72□□□□□ -0.37
MBD3-201ENST00000156825 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
MBD3-201ENST00000156825 CRYGAP11844 174 aa12.71□□□□□ -0.37
MBD3-201ENST00000156825 CXCL6P80162 114 aa12.71□□□□□ -0.38
MBD3-201ENST00000156825 Q6ZRX8 168 aa12.71□□□□□ -0.38
MBD3-201ENST00000156825 LINC00476Q8WZB0 136 aa12.7□□□□□ -0.38
MBD3-201ENST00000156825 KLK9Q2XQG4 91 aa12.7□□□□□ -0.38
MBD3-201ENST00000156825 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
MBD3-201ENST00000156825 EIF4EBP3O60516 100 aaPredicted RBP12.7□□□□□ -0.38
MBD3-201ENST00000156825 CSNK1G2-AS1Q8NCQ2 148 aa12.69□□□□□ -0.38
MBD3-201ENST00000156825 LITAFQ99732 161 aa12.68□□□□□ -0.38
MBD3-201ENST00000156825 LIMD2Q9BT23 127 aa12.68□□□□□ -0.38
MBD3-201ENST00000156825 A0A096LNT2 108 aa12.67□□□□□ -0.38
MBD3-201ENST00000156825 KRTAP10-11P60412 298 aa12.66□□□□□ -0.38
MBD3-201ENST00000156825 CHD6Q8TD26 2715 aa12.66□□□□□ -0.38
MBD3-201ENST00000156825 RPL37AP61513 92 aaKnown RBP12.65□□□□□ -0.38
MBD3-201ENST00000156825 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
MBD3-201ENST00000156825 Q6ZQT0 140 aa12.64□□□□□ -0.39
MBD3-201ENST00000156825 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
MBD3-201ENST00000156825 PMAIP1Q13794 54 aa12.64□□□□□ -0.39
MBD3-201ENST00000156825 DNAH10OSP0CZ25 163 aa12.63□□□□□ -0.39
MBD3-201ENST00000156825 TRIOO75962 3097 aa12.63□□□□□ -0.39
MBD3-201ENST00000156825 GVQW2A0A096LPI5 108 aaPredicted RBP12.63□□□□□ -0.39
MBD3-201ENST00000156825 hDV103S1A0JD37 113 aa12.63□□□□□ -0.39
MBD3-201ENST00000156825 Q8NBF4 154 aa12.63□□□□□ -0.39
MBD3-201ENST00000156825 SERTAD4-AS1Q5TG53 156 aa12.62□□□□□ -0.39
MBD3-201ENST00000156825 GIG44P09565 113 aaPredicted RBP12.62□□□□□ -0.39
MBD3-201ENST00000156825 K7EIL1 84 aa12.61□□□□□ -0.39
MBD3-201ENST00000156825 VPREB1P12018 145 aa12.61□□□□□ -0.39
MBD3-201ENST00000156825 STAB1Q9NY15 2570 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms