RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 C9orf116Q5BN46 136 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-227ENST00000641811 C6orf226Q5I0X4 101 aa10.84□□□□□ -0.67
PHGDH-227ENST00000641811 Q6ZRP5 223 aa10.84□□□□□ -0.67
PHGDH-227ENST00000641811 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-227ENST00000641811 TRGC2P03986 189 aa10.83□□□□□ -0.68
PHGDH-227ENST00000641811 Q8IZM0 81 aa10.83□□□□□ -0.68
PHGDH-227ENST00000641811 IGLV5-45A0A087WSX0 123 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 TRBV30A0A0K0K1B3 111 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 SCO1O75880 301 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 CKS1BP61024 79 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 GAGE2EQ4V326 116 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 GAGE2DQ9UEU5 116 aa10.82□□□□□ -0.68
PHGDH-227ENST00000641811 DMBT1Q9UGM3 2413 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-227ENST00000641811 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
PHGDH-227ENST00000641811 TLX1NBP0CAT3 122 aa10.81□□□□□ -0.68
PHGDH-227ENST00000641811 CHCHD1Q96BP2 118 aaKnown RBP10.8□□□□□ -0.68
PHGDH-227ENST00000641811 FAM168BA1KXE4 195 aa10.79□□□□□ -0.68
PHGDH-227ENST00000641811 COLCA2A8K830 154 aa10.79□□□□□ -0.68
PHGDH-227ENST00000641811 ATP5LO75964 103 aa10.79□□□□□ -0.68
PHGDH-227ENST00000641811 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
PHGDH-227ENST00000641811 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
PHGDH-227ENST00000641811 BAGE3Q86Y29 109 aa10.78□□□□□ -0.68
PHGDH-227ENST00000641811 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
PHGDH-227ENST00000641811 KRTAP29-1A8MX34 341 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-227ENST00000641811 NDUFC2-KCTD14E9PQ53 114 aa10.77□□□□□ -0.69
PHGDH-227ENST00000641811 PHF5AQ7RTV0 110 aaKnown RBP10.77□□□□□ -0.69
PHGDH-227ENST00000641811 PKHD1L1Q86WI1 4243 aa10.77□□□□□ -0.69
PHGDH-227ENST00000641811 F8VRH5 84 aa10.76□□□□□ -0.69
PHGDH-227ENST00000641811 J3QL48 77 aa10.76□□□□□ -0.69
PHGDH-227ENST00000641811 ZNF22P17026 224 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-227ENST00000641811 FAM19A5Q7Z5A7 132 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-227ENST00000641811 FAM19A2Q8N3H0 131 aa10.76□□□□□ -0.69
PHGDH-227ENST00000641811 H3BRM9 83 aa10.75□□□□□ -0.69
PHGDH-227ENST00000641811 C9orf129Q5T035 196 aaKnown RBP10.75□□□□□ -0.69
PHGDH-227ENST00000641811 KRTAP7-1Q8IUC3 87 aa10.75□□□□□ -0.69
PHGDH-227ENST00000641811 C11orf86A6NJI1 115 aa10.74□□□□□ -0.69
PHGDH-227ENST00000641811 HSBP1O75506 76 aa10.74□□□□□ -0.69
PHGDH-227ENST00000641811 LINC00310P59036 64 aa10.74□□□□□ -0.69
PHGDH-227ENST00000641811 IFI27L1Q96BM0 104 aa10.74□□□□□ -0.69
PHGDH-227ENST00000641811 LRP1Q07954 4544 aaKnown RBP10.74□□□□□ -0.69
PHGDH-227ENST00000641811 HERC1Q15751 4861 aa10.73□□□□□ -0.69
PHGDH-227ENST00000641811 SERF1AO75920 110 aa10.73□□□□□ -0.69
PHGDH-227ENST00000641811 CXCL5P42830 114 aa10.73□□□□□ -0.69
PHGDH-227ENST00000641811 CHTOPQ9Y3Y2 248 aaKnown RBP10.72□□□□□ -0.69
PHGDH-227ENST00000641811 IGLV5-39A0A0G2JS06 123 aa10.71□□□□□ -0.69
PHGDH-227ENST00000641811 NUPR1O60356 82 aa10.71□□□□□ -0.69
PHGDH-227ENST00000641811 OXTP01178 125 aa10.71□□□□□ -0.69
PHGDH-227ENST00000641811 TMEM170BQ5T4T1 132 aa10.71□□□□□ -0.69
PHGDH-227ENST00000641811 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
PHGDH-227ENST00000641811 KRTAP11-1Q8IUC1 163 aa10.7□□□□□ -0.7
PHGDH-227ENST00000641811 PSORS1C2Q9UIG4 136 aa10.7□□□□□ -0.7
PHGDH-227ENST00000641811 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
PHGDH-227ENST00000641811 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
PHGDH-227ENST00000641811 M0QXV9 152 aa10.68□□□□□ -0.7
PHGDH-227ENST00000641811 SERTAD4-AS1Q5TG53 156 aa10.68□□□□□ -0.7
PHGDH-227ENST00000641811 H0Y8G0 127 aa10.66□□□□□ -0.7
PHGDH-227ENST00000641811 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
PHGDH-227ENST00000641811 FABP4P15090 132 aa10.65□□□□□ -0.7
PHGDH-227ENST00000641811 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
PHGDH-227ENST00000641811 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
PHGDH-227ENST00000641811 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-227ENST00000641811 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
PHGDH-227ENST00000641811 PFN2P35080 140 aa10.63□□□□□ -0.71
PHGDH-227ENST00000641811 UBE2BP63146 152 aa10.63□□□□□ -0.71
PHGDH-227ENST00000641811 ODF1Q14990 250 aa10.63□□□□□ -0.71
PHGDH-227ENST00000641811 SPINK6Q6UWN8 80 aa10.63□□□□□ -0.71
PHGDH-227ENST00000641811 C22orf24Q9Y442 160 aa10.63□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BKO60814 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BJP06899 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BOP23527 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BBP33778 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BDP58876 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BCP62807 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST2H2BEQ16778 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BHQ93079 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BNQ99877 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HIST1H2BMQ99879 126 aa10.61□□□□□ -0.71
PHGDH-227ENST00000641811 HSPB8Q9UJY1 196 aa10.6□□□□□ -0.71
PHGDH-227ENST00000641811 ERG28Q9UKR5 140 aa10.6□□□□□ -0.71
PHGDH-227ENST00000641811 IGLV7-43P04211 117 aa10.59□□□□□ -0.71
PHGDH-227ENST00000641811 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
PHGDH-227ENST00000641811 LBHQ53QV2 105 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-227ENST00000641811 MRPL55Q7Z7F7 128 aaKnown RBP10.56□□□□□ -0.72
PHGDH-227ENST00000641811 LINC01600Q96MT4 127 aa10.56□□□□□ -0.72
PHGDH-227ENST00000641811 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
PHGDH-227ENST00000641811 TP73-AS1Q9UF72 201 aa10.56□□□□□ -0.72
PHGDH-227ENST00000641811 PLA2G2DQ9UNK4 145 aa10.56□□□□□ -0.72
PHGDH-227ENST00000641811 GAGE10A6NGK3 116 aa10.55□□□□□ -0.72
PHGDH-227ENST00000641811 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
PHGDH-227ENST00000641811 LINC00167Q96N53 147 aa10.55□□□□□ -0.72
PHGDH-227ENST00000641811 A0A0U1RRA0 63 aa10.54□□□□□ -0.72
PHGDH-227ENST00000641811 RPL37AP8A6NKH3 93 aa10.54□□□□□ -0.72
PHGDH-227ENST00000641811 COX17Q14061 63 aa10.54□□□□□ -0.72
PHGDH-227ENST00000641811 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
PHGDH-227ENST00000641811 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
PHGDH-227ENST00000641811 DPM2O94777 84 aa10.53□□□□□ -0.72
PHGDH-227ENST00000641811 PLNP26678 52 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms