RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 RAB37Q96AX2 223 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
ATM-226ENST00000638443 OCIAD2Q56VL3 154 aa6.76□□□□□ -1.33
ATM-226ENST00000638443 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
ATM-226ENST00000638443 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
ATM-226ENST00000638443 IGLV10-54A0A075B6I4 117 aa6.76□□□□□ -1.33
ATM-226ENST00000638443 DEFB131BA0A096LNP1 70 aa6.76□□□□□ -1.33
ATM-226ENST00000638443 LINC00959A0A1B0GUT2 108 aa6.76□□□□□ -1.33
ATM-226ENST00000638443 LINC00269Q8N2A0 174 aa6.76□□□□□ -1.33
ATM-226ENST00000638443 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
ATM-226ENST00000638443 ANGP03950 147 aaKnown RBP6.75□□□□□ -1.33
ATM-226ENST00000638443 XCL1P47992 114 aa6.75□□□□□ -1.33
ATM-226ENST00000638443 SEC11AP67812 179 aa6.75□□□□□ -1.33
ATM-226ENST00000638443 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
ATM-226ENST00000638443 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
ATM-226ENST00000638443 WFDC10BQ8IUB3 73 aa6.75□□□□□ -1.33
ATM-226ENST00000638443 ZNF625Q96I27 306 aaPredicted RBP6.75□□□□□ -1.33
ATM-226ENST00000638443 IGLV5-39A0A0G2JS06 123 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 FAM236DA0A1B0GTK5 79 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 A0A1B0GUV1 79 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 H3BRM9 83 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 CCL25O15444 150 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 FAM236CP0DP71 79 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATM-226ENST00000638443 LELP1Q5T871 98 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 LYSTQ99698 3801 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 Q9HAA7 133 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 NPC2P61916 151 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 DAND5Q8N907 189 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 LITAFQ99732 161 aa6.74□□□□□ -1.33
ATM-226ENST00000638443 IGHV3-30P01768 117 aa6.73□□□□□ -1.33
ATM-226ENST00000638443 IGHV3-33P01772 117 aa6.73□□□□□ -1.33
ATM-226ENST00000638443 IGHV3-30-5P0DP03 117 aa6.73□□□□□ -1.33
ATM-226ENST00000638443 ADAMTSL4-AS1Q5T5F5 129 aa6.73□□□□□ -1.33
ATM-226ENST00000638443 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
ATM-226ENST00000638443 PRKDCP78527 4128 aaKnown RBP6.72□□□□□ -1.33
ATM-226ENST00000638443 A6NDN8 102 aa6.72□□□□□ -1.33
ATM-226ENST00000638443 REG3AQ06141 175 aa6.72□□□□□ -1.33
ATM-226ENST00000638443 ESRGQ1W209 222 aa6.72□□□□□ -1.33
ATM-226ENST00000638443 KLK12Q9UKR0 248 aa6.71□□□□□ -1.33
ATM-226ENST00000638443 H3BUT2 72 aa6.71□□□□□ -1.34
ATM-226ENST00000638443 NDUFA1O15239 70 aa6.71□□□□□ -1.34
ATM-226ENST00000638443 H3BNG1 76 aa6.7□□□□□ -1.34
ATM-226ENST00000638443 APOMO95445 188 aa6.7□□□□□ -1.34
ATM-226ENST00000638443 SS18Q15532 418 aa6.7□□□□□ -1.34
ATM-226ENST00000638443 SH2D6Q7Z4S9 175 aa6.7□□□□□ -1.34
ATM-226ENST00000638443 MRPL55Q7Z7F7 128 aaKnown RBP6.7□□□□□ -1.34
ATM-226ENST00000638443 MUSTN1Q8IVN3 82 aa6.7□□□□□ -1.34
ATM-226ENST00000638443 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
ATM-226ENST00000638443 STAB2Q8WWQ8 2551 aa6.69□□□□□ -1.34
ATM-226ENST00000638443 SMIM13P0DJ93 91 aa6.69□□□□□ -1.34
ATM-226ENST00000638443 ENHOQ6UWT2 76 aa6.69□□□□□ -1.34
ATM-226ENST00000638443 COX7B2Q8TF08 81 aa6.69□□□□□ -1.34
ATM-226ENST00000638443 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
ATM-226ENST00000638443 TRAV10A0A0B4J240 114 aa6.68□□□□□ -1.34
ATM-226ENST00000638443 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
ATM-226ENST00000638443 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 MEGF8Q7Z7M0 2845 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 PRSS2P07478 247 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 C2orf82Q6UX34 121 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 A0A1B0GWB2 263 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 IGLL5B9A064 214 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 CFC1BP0CG36 223 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 CFC1P0CG37 223 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 FOXI1Q12951 378 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 MEIG1Q5JSS6 88 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 PRR34Q9NV39 138 aa6.67□□□□□ -1.34
ATM-226ENST00000638443 GAGE12HA6NDE8 117 aa6.66□□□□□ -1.34
ATM-226ENST00000638443 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
ATM-226ENST00000638443 MIAQ16674 131 aa6.66□□□□□ -1.34
ATM-226ENST00000638443 SOSTDC1Q6X4U4 206 aa6.66□□□□□ -1.34
ATM-226ENST00000638443 LINC00526Q96FQ7 95 aa6.66□□□□□ -1.34
ATM-226ENST00000638443 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
ATM-226ENST00000638443 B9D2Q9BPU9 175 aa6.65□□□□□ -1.34
ATM-226ENST00000638443 SPANXDQ9BXN6 97 aa6.65□□□□□ -1.34
ATM-226ENST00000638443 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
ATM-226ENST00000638443 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
ATM-226ENST00000638443 A0A1W2PPM0 123 aa6.65□□□□□ -1.35
ATM-226ENST00000638443 COX7A2LO14548 114 aa6.65□□□□□ -1.35
ATM-226ENST00000638443 LINC00588Q9Y4M8 146 aa6.65□□□□□ -1.35
ATM-226ENST00000638443 CRPP02741 224 aa6.64□□□□□ -1.35
ATM-226ENST00000638443 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
ATM-226ENST00000638443 DNAH7Q8WXX0 4024 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 H7C2G1 150 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 J3KT08 172 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 PFN2P35080 140 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 LINC00308Q8TCZ7 52 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 C2orf48Q96LS8 159 aa6.63□□□□□ -1.35
ATM-226ENST00000638443 PLECQ15149 4684 aaKnown RBP6.63□□□□□ -1.35
ATM-226ENST00000638443 TIMM17BO60830 172 aa6.62□□□□□ -1.35
ATM-226ENST00000638443 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
ATM-226ENST00000638443 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
ATM-226ENST00000638443 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
ATM-226ENST00000638443 Q8IZM0 81 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms