RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 IBA57-AS1B1ANH7 110 aa11.32□□□□□ -0.6
CTSD-213ENST00000637915 ATXN8Q156A1 80 aa11.32□□□□□ -0.6
CTSD-213ENST00000637915 Q8IZM0 81 aa11.32□□□□□ -0.6
CTSD-213ENST00000637915 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
CTSD-213ENST00000637915 LINC00158P58513 81 aa11.31□□□□□ -0.6
CTSD-213ENST00000637915 COX6CP09669 75 aa11.3□□□□□ -0.6
CTSD-213ENST00000637915 C9JAW5 83 aa11.3□□□□□ -0.6
CTSD-213ENST00000637915 COX7A2LO14548 114 aa11.3□□□□□ -0.6
CTSD-213ENST00000637915 LYPD5Q6UWN5 251 aa11.3□□□□□ -0.6
CTSD-213ENST00000637915 Q6ZTC4 211 aa11.3□□□□□ -0.6
CTSD-213ENST00000637915 H3BNG1 76 aa11.29□□□□□ -0.6
CTSD-213ENST00000637915 SLC25A20O43772 301 aa11.28□□□□□ -0.6
CTSD-213ENST00000637915 PFN2P35080 140 aa11.28□□□□□ -0.6
CTSD-213ENST00000637915 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
CTSD-213ENST00000637915 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
CTSD-213ENST00000637915 J3QR89 54 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 FOXI1Q12951 378 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 KIAA0087Q14695 138 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 KPRPQ5T749 579 aaPredicted RBP11.27□□□□□ -0.61
CTSD-213ENST00000637915 TEN1Q86WV5 123 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 CLEC2BQ92478 149 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 SND1-IT1Q9HBX3 110 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 PRR34Q9NV39 138 aa11.27□□□□□ -0.61
CTSD-213ENST00000637915 TENM3Q9P273 2699 aa11.26□□□□□ -0.61
CTSD-213ENST00000637915 M0QXV9 152 aa11.26□□□□□ -0.61
CTSD-213ENST00000637915 CCL18P55774 89 aa11.26□□□□□ -0.61
CTSD-213ENST00000637915 KLK12Q9UKR0 248 aa11.26□□□□□ -0.61
CTSD-213ENST00000637915 MALP21145 153 aa11.25□□□□□ -0.61
CTSD-213ENST00000637915 IGKV2-28A0A075B6P5 120 aa11.25□□□□□ -0.61
CTSD-213ENST00000637915 LST1O00453 97 aa11.25□□□□□ -0.61
CTSD-213ENST00000637915 IGKV2D-28P01615 120 aa11.25□□□□□ -0.61
CTSD-213ENST00000637915 CKS1BP61024 79 aa11.25□□□□□ -0.61
CTSD-213ENST00000637915 ANKRD29Q8N6D5 301 aa11.25□□□□□ -0.61
CTSD-213ENST00000637915 COL6A5A8TX70 2615 aa11.24□□□□□ -0.61
CTSD-213ENST00000637915 TRAV13-2A0A0B4J235 113 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 C21orf62-AS1Q17RA5 79 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 ENHOQ6UWT2 76 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 LINC00337Q8N6G1 96 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 GAGE12HA6NDE8 117 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 CRPP02741 224 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 CXCL5P42830 114 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
CTSD-213ENST00000637915 CFAP161Q6P656 301 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 CARD19Q96LW7 228 aa11.23□□□□□ -0.61
CTSD-213ENST00000637915 WFDC10BQ8IUB3 73 aa11.22□□□□□ -0.61
CTSD-213ENST00000637915 PPDPFLQ8WWR9 84 aa11.22□□□□□ -0.61
CTSD-213ENST00000637915 LINC01600Q96MT4 127 aa11.22□□□□□ -0.61
CTSD-213ENST00000637915 C11orf45Q8TAV5 145 aa11.21□□□□□ -0.62
CTSD-213ENST00000637915 PRB2P02812 416 aaPredicted RBP11.2□□□□□ -0.62
CTSD-213ENST00000637915 NOTCH1P46531 2555 aa11.19□□□□□ -0.62
CTSD-213ENST00000637915 KLK5Q9Y337 293 aaPredicted RBP11.19□□□□□ -0.62
CTSD-213ENST00000637915 DEFB131BA0A096LNP1 70 aa11.19□□□□□ -0.62
CTSD-213ENST00000637915 RPL28P46779 137 aaKnown RBP11.18□□□□□ -0.62
CTSD-213ENST00000637915 COX17Q14061 63 aa11.18□□□□□ -0.62
CTSD-213ENST00000637915 UBE2WQ96B02 151 aa11.18□□□□□ -0.62
CTSD-213ENST00000637915 ESRGQ1W209 222 aa11.17□□□□□ -0.62
CTSD-213ENST00000637915 H3BT86 120 aa11.17□□□□□ -0.62
CTSD-213ENST00000637915 SPAG11BQ08648 103 aa11.17□□□□□ -0.62
CTSD-213ENST00000637915 TRAV8-4A0A0B4J246 113 aa11.16□□□□□ -0.62
CTSD-213ENST00000637915 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
CTSD-213ENST00000637915 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
CTSD-213ENST00000637915 NTN5Q8WTR8 489 aaPredicted RBP11.16□□□□□ -0.62
CTSD-213ENST00000637915 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
CTSD-213ENST00000637915 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
CTSD-213ENST00000637915 K7EIL1 84 aa11.14□□□□□ -0.63
CTSD-213ENST00000637915 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
CTSD-213ENST00000637915 SMIM11BQ8TCY0 68 aa11.14□□□□□ -0.63
CTSD-213ENST00000637915 TM2D3Q9BRN9 247 aa11.14□□□□□ -0.63
CTSD-213ENST00000637915 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
CTSD-213ENST00000637915 UNQ6190/PRO20217Q6UXQ8 127 aa11.13□□□□□ -0.63
CTSD-213ENST00000637915 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
CTSD-213ENST00000637915 TEX49A0A1B0GTD5 131 aa11.12□□□□□ -0.63
CTSD-213ENST00000637915 TRACP01848 142 aa11.12□□□□□ -0.63
CTSD-213ENST00000637915 KRTAP26-1Q6PEX3 210 aa11.11□□□□□ -0.63
CTSD-213ENST00000637915 OR13C6PQ8NH95 151 aa11.11□□□□□ -0.63
CTSD-213ENST00000637915 SIGMAR1Q99720 223 aa11.11□□□□□ -0.63
CTSD-213ENST00000637915 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
CTSD-213ENST00000637915 MRAPQ8TCY5 172 aa11.1□□□□□ -0.63
CTSD-213ENST00000637915 NDUFC2O95298 119 aa11.1□□□□□ -0.63
CTSD-213ENST00000637915 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
CTSD-213ENST00000637915 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
CTSD-213ENST00000637915 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
CTSD-213ENST00000637915 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
CTSD-213ENST00000637915 TRAV10A0A0B4J240 114 aa11.08□□□□□ -0.64
CTSD-213ENST00000637915 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
CTSD-213ENST00000637915 MUC7Q8TAX7 377 aa11.07□□□□□ -0.64
CTSD-213ENST00000637915 Q8NDZ9 215 aa11.07□□□□□ -0.64
CTSD-213ENST00000637915 H0YGX0 51 aa11.06□□□□□ -0.64
CTSD-213ENST00000637915 SCGB1A1P11684 91 aa11.06□□□□□ -0.64
CTSD-213ENST00000637915 A0A087WYN8 130 aa11.05□□□□□ -0.64
CTSD-213ENST00000637915 C6orf48Q9UBA6 75 aa11.05□□□□□ -0.64
CTSD-213ENST00000637915 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
CTSD-213ENST00000637915 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
CTSD-213ENST00000637915 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
CTSD-213ENST00000637915 DNAH10OSP0CZ25 163 aa11.03□□□□□ -0.64
CTSD-213ENST00000637915 C15orf56Q8N910 161 aa11.03□□□□□ -0.64
CTSD-213ENST00000637915 C1orf43Q9BWL3 253 aa11.03□□□□□ -0.64
CTSD-213ENST00000637915 Q9HAA7 133 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms