RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 OR5A1Q8NGJ0 315 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 PLEKHB2Q96CS7 222 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 TMEM101Q96IK0 257 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 FAT3Q8TDW7 4589 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 TRBV6-8A0A0A6YYG3 113 aa5.14□□□□□ -1.59
PNKP-229ENST00000637897 J3QQQ9 107 aa5.14□□□□□ -1.59
PNKP-229ENST00000637897 LECT2O14960 151 aa5.14□□□□□ -1.59
PNKP-229ENST00000637897 LGALS3P17931 250 aaKnown RBP5.14□□□□□ -1.59
PNKP-229ENST00000637897 UBE2D1P51668 147 aa5.14□□□□□ -1.59
PNKP-229ENST00000637897 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
PNKP-229ENST00000637897 LINC01620Q4KN68 170 aa5.14□□□□□ -1.59
PNKP-229ENST00000637897 GEMIN7Q9H840 131 aaKnown RBP5.14□□□□□ -1.59
PNKP-229ENST00000637897 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
PNKP-229ENST00000637897 DMBT1Q9UGM3 2413 aaPredicted RBP5.14□□□□□ -1.59
PNKP-229ENST00000637897 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 H3BRM9 83 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 HERVK_113P63121 156 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 SCGB1D4Q6XE38 83 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 FAM19A3Q7Z5A8 133 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 CEND1Q8N111 149 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 HIST1H4GQ99525 98 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 TM2D2Q9BX73 214 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 CDC42SE2Q9NRR3 84 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 COX11Q9Y6N1 276 aa5.13□□□□□ -1.59
PNKP-229ENST00000637897 IGLV5-45A0A087WSX0 123 aa5.12□□□□□ -1.59
PNKP-229ENST00000637897 INAFM2P0DMQ5 153 aa5.12□□□□□ -1.59
PNKP-229ENST00000637897 RNASE13Q5GAN3 156 aaKnown RBP5.12□□□□□ -1.59
PNKP-229ENST00000637897 ENHOQ6UWT2 76 aa5.12□□□□□ -1.59
PNKP-229ENST00000637897 LINC00469Q8N7U9 141 aa5.12□□□□□ -1.59
PNKP-229ENST00000637897 KLK12Q9UKR0 248 aa5.12□□□□□ -1.59
PNKP-229ENST00000637897 IGHV1-58A0A0C4DH39 117 aa5.11□□□□□ -1.59
PNKP-229ENST00000637897 TAX1BP3O14907 124 aa5.11□□□□□ -1.59
PNKP-229ENST00000637897 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
PNKP-229ENST00000637897 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
PNKP-229ENST00000637897 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
PNKP-229ENST00000637897 SPANXB1Q9NS25 103 aaPredicted RBP5.11□□□□□ -1.59
PNKP-229ENST00000637897 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.1□□□□□ -1.59
PNKP-229ENST00000637897 PSCAO43653 123 aa5.1□□□□□ -1.59
PNKP-229ENST00000637897 SMIM13P0DJ93 91 aa5.1□□□□□ -1.59
PNKP-229ENST00000637897 GAGE6Q13070 117 aa5.1□□□□□ -1.59
PNKP-229ENST00000637897 SRSF9Q13242 221 aaKnown RBP eCLIP5.1□□□□□ -1.59
PNKP-229ENST00000637897 LINC00242Q5T6M2 205 aa5.1□□□□□ -1.59
PNKP-229ENST00000637897 IGHV3-64A0A075B6Q5 118 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 TRAV8-3A0A0A6YYJ7 113 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 TRAV13-1A0A0B4J241 112 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 A0A1B0GUV1 79 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 C9orf118A6NHY6 69 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 TMEM238C9JI98 176 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 FXYD2P54710 66 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 UBE2WQ96B02 151 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 CDKN2A-AS1Q9UH64 79 aa5.09□□□□□ -1.59
PNKP-229ENST00000637897 IGLV5-39A0A0G2JS06 123 aa5.08□□□□□ -1.6
PNKP-229ENST00000637897 PANO1I0J062 215 aa5.08□□□□□ -1.6
PNKP-229ENST00000637897 CCL25O15444 150 aa5.08□□□□□ -1.6
PNKP-229ENST00000637897 SPINK8P0C7L1 97 aa5.08□□□□□ -1.6
PNKP-229ENST00000637897 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
PNKP-229ENST00000637897 NDUFA12Q9UI09 145 aa5.08□□□□□ -1.6
PNKP-229ENST00000637897 IGLV4-60A0A075B6I1 120 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 IGKV2D-24A0A075B6R9 120 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 TMEM262E9PQX1 116 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 NDUFA1O15239 70 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 TIMM17BO60830 172 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 COX6A2Q02221 97 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 VAMP3Q15836 100 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 Q6ZVH6 145 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 PRR34Q9NV39 138 aa5.07□□□□□ -1.6
PNKP-229ENST00000637897 NHP2Q9NX24 153 aaKnown RBP5.07□□□□□ -1.6
PNKP-229ENST00000637897 SMIM1B2RUZ4 78 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 SLPIP03973 132 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 RBX1P62877 108 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 UBE2V1Q13404 147 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 SS18Q15532 418 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 CIRBP-AS1Q8TBR5 109 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
PNKP-229ENST00000637897 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 H3BUT2 72 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 HERV-K104P63124 156 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 RPL24P83731 157 aaKnown RBP5.05□□□□□ -1.6
PNKP-229ENST00000637897 CIRBPQ14011 172 aaKnown RBP5.05□□□□□ -1.6
PNKP-229ENST00000637897 CFAP161Q6P656 301 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 CLPSL2Q6UWE3 100 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 GTF2H5Q6ZYL4 71 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 LINC00528Q8N1L1 170 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 LINC01561Q8N1V8 128 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 RAB37Q96AX2 223 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 SPANXDQ9BXN6 97 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 SPANXCQ9NY87 97 aa5.05□□□□□ -1.6
PNKP-229ENST00000637897 A0A087WZ39 114 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.04□□□□□ -1.6
PNKP-229ENST00000637897 IGHV3OR16-9A0A0B4J2B5 98 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 USP17L23D6RBM5 183 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 K7ERJ3 54 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 FABP2P12104 132 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 IFITM1P13164 125 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 SFTA2Q6UW10 78 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms