RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 HIGD2BQ4VC39 106 aa10.16□□□□□ -0.78
CTSD-207ENST00000636571 PCP2Q8IVA1 136 aa10.16□□□□□ -0.78
CTSD-207ENST00000636571 DYNC1H1Q14204 4646 aaKnown RBP10.15□□□□□ -0.78
CTSD-207ENST00000636571 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
CTSD-207ENST00000636571 J3QQQ9 107 aa10.14□□□□□ -0.79
CTSD-207ENST00000636571 LGALS3P17931 250 aaKnown RBP10.14□□□□□ -0.79
CTSD-207ENST00000636571 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
CTSD-207ENST00000636571 APOMO95445 188 aa10.14□□□□□ -0.79
CTSD-207ENST00000636571 PRSS2P07478 247 aa10.13□□□□□ -0.79
CTSD-207ENST00000636571 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
CTSD-207ENST00000636571 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
CTSD-207ENST00000636571 NTN5Q8WTR8 489 aaPredicted RBP10.13□□□□□ -0.79
CTSD-207ENST00000636571 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
CTSD-207ENST00000636571 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
CTSD-207ENST00000636571 EREGO14944 169 aa10.12□□□□□ -0.79
CTSD-207ENST00000636571 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
CTSD-207ENST00000636571 SLPIP03973 132 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 LINC01620Q4KN68 170 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 UQCR10Q9UDW1 63 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 ZNF815PA8K554 130 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 C2orf82Q6UX34 121 aa10.11□□□□□ -0.79
CTSD-207ENST00000636571 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
CTSD-207ENST00000636571 COX8AP10176 69 aa10.1□□□□□ -0.79
CTSD-207ENST00000636571 NDUFA12Q9UI09 145 aa10.1□□□□□ -0.79
CTSD-207ENST00000636571 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
CTSD-207ENST00000636571 Q8IZM0 81 aa10.09□□□□□ -0.79
CTSD-207ENST00000636571 GVQW2A0A096LPI5 108 aaPredicted RBP10.09□□□□□ -0.79
CTSD-207ENST00000636571 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
CTSD-207ENST00000636571 IGLV5-52A0A0A0MRZ9 124 aa10.08□□□□□ -0.8
CTSD-207ENST00000636571 CKS1BP61024 79 aa10.08□□□□□ -0.8
CTSD-207ENST00000636571 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
CTSD-207ENST00000636571 SNHG12Q9BXW3 62 aa10.08□□□□□ -0.8
CTSD-207ENST00000636571 CTAG1AP78358 180 aa10.07□□□□□ -0.8
CTSD-207ENST00000636571 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
CTSD-207ENST00000636571 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
CTSD-207ENST00000636571 C10orf25Q5T742 122 aa10.06□□□□□ -0.8
CTSD-207ENST00000636571 UNQ6190/PRO20217Q6UXQ8 127 aa10.06□□□□□ -0.8
CTSD-207ENST00000636571 C16orf90A8MZG2 172 aa10.06□□□□□ -0.8
CTSD-207ENST00000636571 NDUFA1O15239 70 aa10.06□□□□□ -0.8
CTSD-207ENST00000636571 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
CTSD-207ENST00000636571 CAMK2N2Q96S95 79 aa10.06□□□□□ -0.8
CTSD-207ENST00000636571 BIRC6Q9NR09 4857 aa10.05□□□□□ -0.8
CTSD-207ENST00000636571 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
CTSD-207ENST00000636571 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
CTSD-207ENST00000636571 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
CTSD-207ENST00000636571 DNAH8Q96JB1 4490 aa10.04□□□□□ -0.8
CTSD-207ENST00000636571 A0A0J9YXY3 114 aa10.03□□□□□ -0.8
CTSD-207ENST00000636571 KRTAP10-1P60331 282 aa10.03□□□□□ -0.8
CTSD-207ENST00000636571 C9orf116Q5BN46 136 aaPredicted RBP10.03□□□□□ -0.8
CTSD-207ENST00000636571 M0R143 59 aa10.03□□□□□ -0.8
CTSD-207ENST00000636571 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
CTSD-207ENST00000636571 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
CTSD-207ENST00000636571 Q6ZRU5 148 aa10.03□□□□□ -0.8
CTSD-207ENST00000636571 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
CTSD-207ENST00000636571 DLEU1O43261 78 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 PFN2P35080 140 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 CXCL5P42830 114 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 C6orf48Q9UBA6 75 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 GCSHP23434 173 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 C2orf91Q6ZV80 131 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 C2orf48Q96LS8 159 aa10.01□□□□□ -0.81
CTSD-207ENST00000636571 SMIM13P0DJ93 91 aa10□□□□□ -0.81
CTSD-207ENST00000636571 HERV-K104P63124 156 aa10□□□□□ -0.81
CTSD-207ENST00000636571 DAND5Q8N907 189 aa10□□□□□ -0.81
CTSD-207ENST00000636571 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
CTSD-207ENST00000636571 CARD19Q96LW7 228 aa9.99□□□□□ -0.81
CTSD-207ENST00000636571 BATFQ16520 125 aa9.98□□□□□ -0.81
CTSD-207ENST00000636571 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
CTSD-207ENST00000636571 ERG28Q9UKR5 140 aa9.98□□□□□ -0.81
CTSD-207ENST00000636571 LINC00158P58513 81 aa9.98□□□□□ -0.81
CTSD-207ENST00000636571 FAM30AQ9NZY2 134 aa9.98□□□□□ -0.81
CTSD-207ENST00000636571 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
CTSD-207ENST00000636571 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.97□□□□□ -0.81
CTSD-207ENST00000636571 NPC2P61916 151 aa9.97□□□□□ -0.81
CTSD-207ENST00000636571 HAMPP81172 84 aa9.97□□□□□ -0.81
CTSD-207ENST00000636571 SFTA2Q6UW10 78 aa9.97□□□□□ -0.81
CTSD-207ENST00000636571 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.81
CTSD-207ENST00000636571 LITAFQ99732 161 aa9.96□□□□□ -0.81
CTSD-207ENST00000636571 PANO1I0J062 215 aa9.96□□□□□ -0.82
CTSD-207ENST00000636571 LBHQ53QV2 105 aaPredicted RBP9.96□□□□□ -0.82
CTSD-207ENST00000636571 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
CTSD-207ENST00000636571 RYR1P21817 5038 aa9.95□□□□□ -0.82
CTSD-207ENST00000636571 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
CTSD-207ENST00000636571 A0A1B0GV90 55 aa9.95□□□□□ -0.82
CTSD-207ENST00000636571 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
CTSD-207ENST00000636571 CIRBPQ14011 172 aaKnown RBP9.95□□□□□ -0.82
CTSD-207ENST00000636571 SRSF9Q13242 221 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTSD-207ENST00000636571 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
CTSD-207ENST00000636571 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
CTSD-207ENST00000636571 F8WDY8 70 aa9.93□□□□□ -0.82
CTSD-207ENST00000636571 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
CTSD-207ENST00000636571 HIGD1BQ9P298 99 aa9.93□□□□□ -0.82
CTSD-207ENST00000636571 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
CTSD-207ENST00000636571 HSPG2P98160 4391 aa9.92□□□□□ -0.82
CTSD-207ENST00000636571 TIMM17BO60830 172 aa9.92□□□□□ -0.82
CTSD-207ENST00000636571 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
CTSD-207ENST00000636571 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms