RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PSCAO43653 123 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 EPG5Q9HCE0 2579 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 TRAV23DV6A0A075B6W5 121 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 KRTAP10-3P60369 221 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 C6orf99Q4VX62 202 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 SOSTDC1Q6X4U4 206 aa3.14□□□□□ -1.91
SCN1A-210ENST00000635776 RPL18AQ02543 176 aaKnown RBP3.13□□□□□ -1.91
SCN1A-210ENST00000635776 TRBV10-3A0A0K0K1G6 114 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 DHRS4-AS1Q9P1J3 65 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 ZFYVE26Q68DK2 2539 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 MT-ATP8P03928 68 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 Q6JHZ5 121 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 VCANP13611 3396 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 NDUFC2-KCTD14E9PQ53 114 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 Q8N814 137 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 TRBV7-7A0A0K0K1E9 115 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 ZNF73O43830 326 aaPredicted RBP3.13□□□□□ -1.91
SCN1A-210ENST00000635776 OXLD1Q5BKU9 147 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 MGAQ8IWI9 3026 aa3.13□□□□□ -1.91
SCN1A-210ENST00000635776 ETDCA0A1B0GVM5 59 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 NCR3O14931 201 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 FUSP35637 526 aaKnown RBP eCLIP3.12□□□□□ -1.91
SCN1A-210ENST00000635776 KIAA0087Q14695 138 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 Q6ZTC4 211 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 CELA1Q9UNI1 258 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 NDUFV3P56181 108 aaKnown RBP3.12□□□□□ -1.91
SCN1A-210ENST00000635776 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 Q9HAA7 133 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 NOTCH2Q04721 2471 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 A0A0U1RQV1 116 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 C9orf153Q5TBE3 101 aa3.12□□□□□ -1.91
SCN1A-210ENST00000635776 LOC107984640A0A0U1RRK4 108 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 USP24Q9UPU5 2620 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 NHLRC4P0CG21 123 aaPredicted RBP3.11□□□□□ -1.91
SCN1A-210ENST00000635776 LINC00575Q6W349 94 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 KRTAP24-1Q3LI83 254 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 BCE1O60756 84 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 CCKP06307 115 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 IGKV2-28A0A075B6P5 120 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 IGKV2D-28P01615 120 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 ACANP16112 2415 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 HIST1H4AP62805 103 aaKnown RBP3.11□□□□□ -1.91
SCN1A-210ENST00000635776 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
SCN1A-210ENST00000635776 UQCRQO14949 82 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 DNAH10OSP0CZ25 163 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 POLQO75417 2590 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 ABCA12Q86UK0 2595 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 HIGD2BQ4VC39 106 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 LINC00474Q9P2X8 69 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 ENHOQ6UWT2 76 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 SDIM1Q6ZPB5 146 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 PRYO14603 147 aa3.1□□□□□ -1.91
SCN1A-210ENST00000635776 FAM236AA0A1B0GUQ0 79 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 FAM236BA0A1B0GV22 79 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 IGSF10Q6WRI0 2623 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 A0A087WYN8 130 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 NUPR2A6NF83 97 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 WFDC10BQ8IUB3 73 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 SETD2Q9BYW2 2564 aaPredicted RBP3.09□□□□□ -1.91
SCN1A-210ENST00000635776 IGLV6-57P01721 117 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 Q6ZQY7 126 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 TLN2Q9Y4G6 2542 aa3.09□□□□□ -1.91
SCN1A-210ENST00000635776 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 NANOS2P60321 138 aaKnown RBP3.09□□□□□ -1.92
SCN1A-210ENST00000635776 ESRGQ1W209 222 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 DNAH14Q0VDD8 3507 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 WDFY4Q6ZS81 3184 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 CR1P17927 2039 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 PLA2G2DQ9UNK4 145 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 TLX1NBP0CAT3 122 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 HAMPP81172 84 aa3.09□□□□□ -1.92
SCN1A-210ENST00000635776 XAGE1AQ9HD64 81 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 UPK3BQ9BT76 320 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 V9GYY9 64 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 ELOF1P60002 83 aaKnown RBP3.08□□□□□ -1.92
SCN1A-210ENST00000635776 RPL37AP8A6NKH3 93 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 SPATA3Q8NHX4 192 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 NREPQ16612 68 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 C6orf223Q8N319 242 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 TM2D3Q9BRN9 247 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 VPS13AQ96RL7 3174 aa3.08□□□□□ -1.92
SCN1A-210ENST00000635776 Q6ZRU5 148 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 FAM218AQ96MZ4 157 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 RETNQ9HD89 108 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 USP17L23D6RBM5 183 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 UBE2BP63146 152 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 C5orf47Q569G3 176 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 SERP2Q8N6R1 65 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 DPH3Q96FX2 82 aa3.07□□□□□ -1.92
SCN1A-210ENST00000635776 COX7CP15954 63 aa3.06□□□□□ -1.92
SCN1A-210ENST00000635776 CFAP54Q96N23 3096 aa3.06□□□□□ -1.92
SCN1A-210ENST00000635776 VPREB1P12018 145 aa3.06□□□□□ -1.92
SCN1A-210ENST00000635776 C3orf22Q8N5N4 141 aa3.06□□□□□ -1.92
SCN1A-210ENST00000635776 J3KT08 172 aa3.06□□□□□ -1.92
SCN1A-210ENST00000635776 CXCL6P80162 114 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms