RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 BAALC-AS2P0C853 105 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 FXYD6Q9H0Q3 95 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 NINQ8N4C6 2090 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 IGLV2-18A0A075B6J9 118 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 FAM223BA6NKX1 122 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 ODF3BA8MYP8 253 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 IGLV7-43P04211 117 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 HMGN2P05204 90 aaKnown RBP3.05□□□□□ -1.92
SDCBP-213ENST00000630925 GCHFRP30047 84 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 DEFB116Q30KQ4 102 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 SPANXN5Q5MJ07 72 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 C6orf201Q7Z4U5 140 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 C20orf197Q8N268 126 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 DYNLRB1Q9NP97 96 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 DOCK9Q9BZ29 2069 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 PRRC2CQ9Y520 2896 aaKnown RBP3.05□□□□□ -1.92
SDCBP-213ENST00000630925 TLN2Q9Y4G6 2542 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 SHANK1Q9Y566 2161 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 VPS13CQ709C8 3753 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 TRAV10A0A0B4J240 114 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 LINC00483Q53H64 154 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 PYDC2Q56P42 97 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 SFTA2Q6UW10 78 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.04□□□□□ -1.92
SDCBP-213ENST00000630925 Q8N9P0 234 aaPredicted RBP3.04□□□□□ -1.92
SDCBP-213ENST00000630925 PROK2Q9HC23 129 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 MPDZO75970 2070 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 F8WEM9 126 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 ERC2-IT1O76042 136 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 MRPS21P82921 87 aaKnown RBP3.04□□□□□ -1.92
SDCBP-213ENST00000630925 SMR3AQ99954 134 aa3.04□□□□□ -1.92
SDCBP-213ENST00000630925 PCLOQ9Y6V0 5065 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 MYOFQ9NZM1 2061 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 FREM3P0C091 2139 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 IGHV3-64A0A075B6Q5 118 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 CCL22O00626 93 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 EDDM3BP56851 147 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 PSMG4Q5JS54 123 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 ZNF818PQ6ZRF7 136 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 TMEM254Q8TBM7 123 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 KLF14Q8TD94 323 aaPredicted RBP3.03□□□□□ -1.92
SDCBP-213ENST00000630925 IMMP1LQ96LU5 166 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 LIMD2Q9BT23 127 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
SDCBP-213ENST00000630925 IGLV3-32A0A0A0MS00 114 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 MYMXA0A1B0GTQ4 84 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 A0A1W2PNM2 257 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 TMEM30CPA0ZSE6 113 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 TMEM14DPA8MWL7 114 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 RTL8CO15255 209 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 IFI27L1Q96BM0 104 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 KLK12Q9UKR0 248 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 HEATR5BQ9P2D3 2071 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 TRAV12-3A0A0B4J271 114 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 LOC285095A0A1B0GVY8 99 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 MDKP21741 143 aaPredicted RBP3.02□□□□□ -1.93
SDCBP-213ENST00000630925 C10orf128Q5T292 105 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 PSENENQ9NZ42 101 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 ESPL1Q14674 2120 aa3.02□□□□□ -1.93
SDCBP-213ENST00000630925 TRBV6-6A0A0A6YYG2 114 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 A0A1B0GWA3 101 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 C2orf70A6NJV1 201 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 UBE2D1P51668 147 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 C9orf163Q8N9P6 203 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 TMEM14BQ9NUH8 114 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 ARL2-SNX15V9GYD0 113 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 SVEP1Q4LDE5 3571 aa3.01□□□□□ -1.93
SDCBP-213ENST00000630925 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
SDCBP-213ENST00000630925 IGHV3OR16-8A0A075B7F1 116 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 COX6CP09669 75 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 CISD3P0C7P0 127 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 BAGE3Q86Y29 109 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 BAGE2Q86Y30 109 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 LOC101927531A0A1B0GV80 90 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 WISP3O95389 354 aaPredicted RBP3□□□□□ -1.93
SDCBP-213ENST00000630925 IGLV1-47P01700 117 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 DPTQ07507 201 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 ZNF833PQ6ZTB9 187 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 LHFPL6Q9Y693 200 aa3□□□□□ -1.93
SDCBP-213ENST00000630925 TRAV23DV6A0A075B6W5 121 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 HIGD2BQ4VC39 106 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 Q6JHZ5 121 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 NDUFA11Q86Y39 141 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 UBALD1Q8TB05 177 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 LINC00167Q96N53 147 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
SDCBP-213ENST00000630925 MAP1AP78559 2803 aaPredicted RBP2.99□□□□□ -1.93
SDCBP-213ENST00000630925 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 CLPSL1A2RUU4 121 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 CEBPZOSA8MTT3 80 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 ZNF861PO60384 105 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 PLGLAQ15195 96 aa2.99□□□□□ -1.93
SDCBP-213ENST00000630925 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms