RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TMEM141Q96I45 108 aa11.68□□□□□ -0.54
TARDBP-228ENST00000629725 C6orf226Q5I0X4 101 aa11.67□□□□□ -0.54
TARDBP-228ENST00000629725 TOMM7Q9P0U1 55 aa11.67□□□□□ -0.54
TARDBP-228ENST00000629725 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
TARDBP-228ENST00000629725 MAP1LC3AQ9H492 121 aa11.66□□□□□ -0.54
TARDBP-228ENST00000629725 LAMTOR2Q9Y2Q5 125 aa11.66□□□□□ -0.54
TARDBP-228ENST00000629725 PRSS47A8MTI9 375 aa11.65□□□□□ -0.54
TARDBP-228ENST00000629725 Q6ZN92 141 aa11.65□□□□□ -0.54
TARDBP-228ENST00000629725 Q8IZM0 81 aa11.64□□□□□ -0.55
TARDBP-228ENST00000629725 C2orf88Q9BSF0 95 aa11.64□□□□□ -0.55
TARDBP-228ENST00000629725 RPL37AP8A6NKH3 93 aa11.63□□□□□ -0.55
TARDBP-228ENST00000629725 FAM229BQ4G0N7 80 aa11.63□□□□□ -0.55
TARDBP-228ENST00000629725 ZC2HC1BQ5TFG8 222 aa11.63□□□□□ -0.55
TARDBP-228ENST00000629725 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
TARDBP-228ENST00000629725 Q8N8P6 123 aa11.63□□□□□ -0.55
TARDBP-228ENST00000629725 CYSLTR1Q9Y271 337 aa11.63□□□□□ -0.55
TARDBP-228ENST00000629725 PNRC1Q12796 327 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-228ENST00000629725 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-228ENST00000629725 LINC00167Q96N53 147 aa11.62□□□□□ -0.55
TARDBP-228ENST00000629725 ALKBH7Q9BT30 221 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-228ENST00000629725 MT-ND4LP03901 98 aa11.61□□□□□ -0.55
TARDBP-228ENST00000629725 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
TARDBP-228ENST00000629725 UBE2AP49459 152 aa11.6□□□□□ -0.55
TARDBP-228ENST00000629725 CTAG1AP78358 180 aa11.6□□□□□ -0.55
TARDBP-228ENST00000629725 AMELXQ99217 191 aa11.6□□□□□ -0.55
TARDBP-228ENST00000629725 VCX2Q9H322 139 aa11.6□□□□□ -0.55
TARDBP-228ENST00000629725 PPDPFQ9H3Y8 114 aa11.6□□□□□ -0.55
TARDBP-228ENST00000629725 IGKV2D-26A0A0A0MRZ7 120 aa11.59□□□□□ -0.55
TARDBP-228ENST00000629725 F8VRH5 84 aa11.59□□□□□ -0.55
TARDBP-228ENST00000629725 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
TARDBP-228ENST00000629725 KRTAP13-1Q8IUC0 172 aa11.59□□□□□ -0.55
TARDBP-228ENST00000629725 CRCT1Q9UGL9 99 aa11.58□□□□□ -0.56
TARDBP-228ENST00000629725 GAGE10A6NGK3 116 aa11.57□□□□□ -0.56
TARDBP-228ENST00000629725 LINC01547P58512 204 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-228ENST00000629725 IGIPA6NJ69 53 aa11.56□□□□□ -0.56
TARDBP-228ENST00000629725 NPSP0C0P6 89 aa11.56□□□□□ -0.56
TARDBP-228ENST00000629725 K7EMI3 77 aa11.55□□□□□ -0.56
TARDBP-228ENST00000629725 NXT2Q9NPJ8 142 aaKnown RBP11.55□□□□□ -0.56
TARDBP-228ENST00000629725 RAB14P61106 215 aa11.54□□□□□ -0.56
TARDBP-228ENST00000629725 FAM19A3Q7Z5A8 133 aa11.54□□□□□ -0.56
TARDBP-228ENST00000629725 CXCL5P42830 114 aa11.53□□□□□ -0.56
TARDBP-228ENST00000629725 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
TARDBP-228ENST00000629725 HERVK_113P63121 156 aa11.52□□□□□ -0.57
TARDBP-228ENST00000629725 SEC11AP67812 179 aa11.51□□□□□ -0.57
TARDBP-228ENST00000629725 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
TARDBP-228ENST00000629725 NKAPP1Q8N9T2 125 aa11.51□□□□□ -0.57
TARDBP-228ENST00000629725 GEMIN7Q9H840 131 aaKnown RBP11.51□□□□□ -0.57
TARDBP-228ENST00000629725 IGLV5-37A0A075B6J1 123 aa11.5□□□□□ -0.57
TARDBP-228ENST00000629725 G0S2P27469 103 aa11.5□□□□□ -0.57
TARDBP-228ENST00000629725 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
TARDBP-228ENST00000629725 IGKV2-28A0A075B6P5 120 aa11.49□□□□□ -0.57
TARDBP-228ENST00000629725 IGKV2D-28P01615 120 aa11.49□□□□□ -0.57
TARDBP-228ENST00000629725 KIAA1644Q3SXP7 199 aa11.49□□□□□ -0.57
TARDBP-228ENST00000629725 LINC00337Q8N6G1 96 aa11.49□□□□□ -0.57
TARDBP-228ENST00000629725 TOMM6Q96B49 74 aa11.49□□□□□ -0.57
TARDBP-228ENST00000629725 PRLHP81277 87 aa11.47□□□□□ -0.57
TARDBP-228ENST00000629725 ASB16-AS1Q495Z4 193 aa11.47□□□□□ -0.57
TARDBP-228ENST00000629725 FP248Q71RG6 208 aaPredicted RBP11.46□□□□□ -0.57
TARDBP-228ENST00000629725 C3orf22Q8N5N4 141 aa11.46□□□□□ -0.57
TARDBP-228ENST00000629725 SCGB3A1Q96QR1 104 aa11.46□□□□□ -0.57
TARDBP-228ENST00000629725 RAB5BP61020 215 aa11.45□□□□□ -0.58
TARDBP-228ENST00000629725 SPAG11AQ6PDA7 123 aa11.45□□□□□ -0.58
TARDBP-228ENST00000629725 ERASQ7Z444 233 aa11.45□□□□□ -0.58
TARDBP-228ENST00000629725 FAM19A1Q7Z5A9 133 aa11.44□□□□□ -0.58
TARDBP-228ENST00000629725 SMIM1B2RUZ4 78 aa11.43□□□□□ -0.58
TARDBP-228ENST00000629725 SCO1O75880 301 aa11.43□□□□□ -0.58
TARDBP-228ENST00000629725 ADCYAP1P18509 176 aa11.43□□□□□ -0.58
TARDBP-228ENST00000629725 CLLU1Q5K131 121 aa11.43□□□□□ -0.58
TARDBP-228ENST00000629725 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
TARDBP-228ENST00000629725 KRTAP13-3Q3SY46 172 aa11.42□□□□□ -0.58
TARDBP-228ENST00000629725 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
TARDBP-228ENST00000629725 KRTAP4-1Q9BYQ7 146 aa11.42□□□□□ -0.58
TARDBP-228ENST00000629725 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
TARDBP-228ENST00000629725 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
TARDBP-228ENST00000629725 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
TARDBP-228ENST00000629725 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
TARDBP-228ENST00000629725 IGLV5-45A0A087WSX0 123 aa11.39□□□□□ -0.59
TARDBP-228ENST00000629725 TMEM238C9JI98 176 aa11.39□□□□□ -0.59
TARDBP-228ENST00000629725 SEC61BP60468 96 aaKnown RBP11.39□□□□□ -0.59
TARDBP-228ENST00000629725 C4orf48Q5BLP8 95 aa11.39□□□□□ -0.59
TARDBP-228ENST00000629725 TMEM218A2RU14 115 aa11.38□□□□□ -0.59
TARDBP-228ENST00000629725 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
TARDBP-228ENST00000629725 UQCC3Q6UW78 93 aa11.38□□□□□ -0.59
TARDBP-228ENST00000629725 CBLN2Q8IUK8 224 aa11.38□□□□□ -0.59
TARDBP-228ENST00000629725 GNB1LQ9BYB4 327 aa11.38□□□□□ -0.59
TARDBP-228ENST00000629725 CST9LQ9H4G1 147 aa11.38□□□□□ -0.59
TARDBP-228ENST00000629725 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
TARDBP-228ENST00000629725 SPINK8P0C7L1 97 aa11.37□□□□□ -0.59
TARDBP-228ENST00000629725 S100PP25815 95 aa11.36□□□□□ -0.59
TARDBP-228ENST00000629725 M0R378 163 aa11.35□□□□□ -0.59
TARDBP-228ENST00000629725 PMVKQ15126 192 aa11.35□□□□□ -0.59
TARDBP-228ENST00000629725 FA2HQ7L5A8 372 aa11.34□□□□□ -0.59
TARDBP-228ENST00000629725 HIGD2AQ9BW72 106 aa11.34□□□□□ -0.59
TARDBP-228ENST00000629725 ATP5LO75964 103 aa11.33□□□□□ -0.6
TARDBP-228ENST00000629725 VPREB1P12018 145 aa11.33□□□□□ -0.6
TARDBP-228ENST00000629725 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
TARDBP-228ENST00000629725 SMCO4Q9NRQ5 59 aa11.33□□□□□ -0.6
TARDBP-228ENST00000629725 PFN2P35080 140 aa11.32□□□□□ -0.6
TARDBP-228ENST00000629725 MRPL18Q9H0U6 180 aaKnown RBP11.32□□□□□ -0.6
TARDBP-228ENST00000629725 H3BRM9 83 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms