RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 C22orf24Q9Y442 160 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 USP17L23D6RBM5 183 aa6.19□□□□□ -1.42
VCL-207ENST00000624354 NSD1Q96L73 2696 aaPredicted RBP6.19□□□□□ -1.42
VCL-207ENST00000624354 A0A087WVE0 104 aa6.19□□□□□ -1.42
VCL-207ENST00000624354 UBE2L6O14933 153 aa6.19□□□□□ -1.42
VCL-207ENST00000624354 Q6ZTI0 123 aa6.19□□□□□ -1.42
VCL-207ENST00000624354 IL17DQ8TAD2 202 aa6.19□□□□□ -1.42
VCL-207ENST00000624354 Q9HAA7 133 aa6.19□□□□□ -1.42
VCL-207ENST00000624354 NBEAL1Q6ZS30 2694 aa6.18□□□□□ -1.42
VCL-207ENST00000624354 FAM218AQ96MZ4 157 aa6.18□□□□□ -1.42
VCL-207ENST00000624354 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
VCL-207ENST00000624354 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
VCL-207ENST00000624354 PF4P02776 101 aa6.17□□□□□ -1.42
VCL-207ENST00000624354 VWFP04275 2813 aa6.17□□□□□ -1.42
VCL-207ENST00000624354 LINC01561Q8N1V8 128 aa6.17□□□□□ -1.42
VCL-207ENST00000624354 C14orf132Q9NPU4 83 aa6.17□□□□□ -1.42
VCL-207ENST00000624354 CRPP02741 224 aa6.16□□□□□ -1.42
VCL-207ENST00000624354 DEFB113Q30KQ7 82 aa6.16□□□□□ -1.42
VCL-207ENST00000624354 LINC00846Q9NV44 126 aa6.16□□□□□ -1.42
VCL-207ENST00000624354 NOP10Q9NPE3 64 aaKnown RBP6.16□□□□□ -1.42
VCL-207ENST00000624354 CR1P17927 2039 aa6.16□□□□□ -1.42
VCL-207ENST00000624354 NOTCH1P46531 2555 aa6.16□□□□□ -1.42
VCL-207ENST00000624354 CYSRT1A8MQ03 144 aa6.15□□□□□ -1.42
VCL-207ENST00000624354 NDUFC2-KCTD14E9PQ53 114 aa6.15□□□□□ -1.42
VCL-207ENST00000624354 NDUFC2O95298 119 aa6.15□□□□□ -1.42
VCL-207ENST00000624354 PFN2P35080 140 aa6.15□□□□□ -1.42
VCL-207ENST00000624354 FHL2Q14192 279 aa6.15□□□□□ -1.42
VCL-207ENST00000624354 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.43
VCL-207ENST00000624354 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.43
VCL-207ENST00000624354 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.43
VCL-207ENST00000624354 MIR7-3HGQ8N6C7 128 aa6.15□□□□□ -1.43
VCL-207ENST00000624354 COX7B2Q8TF08 81 aa6.15□□□□□ -1.43
VCL-207ENST00000624354 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.43
VCL-207ENST00000624354 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
VCL-207ENST00000624354 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
VCL-207ENST00000624354 AKAP9Q99996 3911 aa6.14□□□□□ -1.43
VCL-207ENST00000624354 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
VCL-207ENST00000624354 A0A1W2PRX2 142 aa6.14□□□□□ -1.43
VCL-207ENST00000624354 GHRHP01286 108 aa6.13□□□□□ -1.43
VCL-207ENST00000624354 LINC00158P58513 81 aa6.13□□□□□ -1.43
VCL-207ENST00000624354 C1orf43Q9BWL3 253 aa6.13□□□□□ -1.43
VCL-207ENST00000624354 CCL24O00175 119 aa6.13□□□□□ -1.43
VCL-207ENST00000624354 LINC00337Q8N6G1 96 aa6.13□□□□□ -1.43
VCL-207ENST00000624354 C16orf74Q96GX8 76 aa6.13□□□□□ -1.43
VCL-207ENST00000624354 FAM236DA0A1B0GTK5 79 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 FAM236CP0DP71 79 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
VCL-207ENST00000624354 FBN1P35555 2871 aaKnown RBP6.12□□□□□ -1.43
VCL-207ENST00000624354 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 IGKV2-28A0A075B6P5 120 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 IGKV2D-28P01615 120 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 TMEM86BQ8N661 226 aa6.12□□□□□ -1.43
VCL-207ENST00000624354 MGAM2Q2M2H8 2515 aa6.11□□□□□ -1.43
VCL-207ENST00000624354 CMC4P56277 68 aaPredicted RBP6.11□□□□□ -1.43
VCL-207ENST00000624354 LINC00336Q6ZUF6 198 aa6.11□□□□□ -1.43
VCL-207ENST00000624354 A0A087WYN8 130 aa6.11□□□□□ -1.43
VCL-207ENST00000624354 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
VCL-207ENST00000624354 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
VCL-207ENST00000624354 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
VCL-207ENST00000624354 H0YGX0 51 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 HILS1P60008 231 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 TRBV6-8A0A0A6YYG3 113 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 IBA57-AS1B1ANH7 110 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 NCR3O14931 201 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 CCL18P55774 89 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 OBSCN-AS1Q96MR7 158 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 IGLV4-60A0A075B6I1 120 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 IGHV3OR16-9A0A0B4J2B5 98 aa6.1□□□□□ -1.43
VCL-207ENST00000624354 GIG44P09565 113 aaPredicted RBP6.1□□□□□ -1.43
VCL-207ENST00000624354 RPL35AP18077 110 aaKnown RBP6.1□□□□□ -1.43
VCL-207ENST00000624354 A0A087WZ39 114 aa6.09□□□□□ -1.44
VCL-207ENST00000624354 DNAJC9-AS1A6NH13 148 aa6.09□□□□□ -1.44
VCL-207ENST00000624354 PAX4O43316 350 aa6.09□□□□□ -1.44
VCL-207ENST00000624354 XCL1P47992 114 aa6.09□□□□□ -1.44
VCL-207ENST00000624354 F8WDY8 70 aa6.08□□□□□ -1.44
VCL-207ENST00000624354 LECT2O14960 151 aa6.08□□□□□ -1.44
VCL-207ENST00000624354 WFDC10AQ9H1F0 79 aa6.08□□□□□ -1.44
VCL-207ENST00000624354 PKIGQ9Y2B9 76 aa6.08□□□□□ -1.44
VCL-207ENST00000624354 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
VCL-207ENST00000624354 WFDC9Q8NEX5 89 aa6.08□□□□□ -1.44
VCL-207ENST00000624354 RNASE1P07998 156 aaKnown RBP6.07□□□□□ -1.44
VCL-207ENST00000624354 C6orf226Q5I0X4 101 aa6.07□□□□□ -1.44
VCL-207ENST00000624354 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
VCL-207ENST00000624354 CCKP06307 115 aa6.07□□□□□ -1.44
VCL-207ENST00000624354 FAM19A1Q7Z5A9 133 aa6.07□□□□□ -1.44
VCL-207ENST00000624354 C11orf68Q9H3H3 251 aaKnown RBP6.07□□□□□ -1.44
VCL-207ENST00000624354 PKD1L1Q8TDX9 2849 aa6.07□□□□□ -1.44
VCL-207ENST00000624354 EPM2AB3EWF7 344 aa6.06□□□□□ -1.44
VCL-207ENST00000624354 ENHOQ6UWT2 76 aa6.06□□□□□ -1.44
VCL-207ENST00000624354 LINC00959A0A1B0GUT2 108 aa6.06□□□□□ -1.44
VCL-207ENST00000624354 INAFM1C9JVW0 142 aa6.06□□□□□ -1.44
VCL-207ENST00000624354 SLPIP03973 132 aa6.06□□□□□ -1.44
VCL-207ENST00000624354 CSNK1G2-AS1Q8NCQ2 148 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms