RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 RPS28P62857 69 aaKnown RBP12.88□□□□□ -0.35
PCDHB2-202ENST00000622947 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
PCDHB2-202ENST00000622947 LST1O00453 97 aa12.87□□□□□ -0.35
PCDHB2-202ENST00000622947 VSIG2Q96IQ7 327 aa12.87□□□□□ -0.35
PCDHB2-202ENST00000622947 DAD1P61803 113 aa12.86□□□□□ -0.35
PCDHB2-202ENST00000622947 OR13C6PQ8NH95 151 aa12.86□□□□□ -0.35
PCDHB2-202ENST00000622947 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
PCDHB2-202ENST00000622947 TRBV6-8A0A0A6YYG3 113 aa12.85□□□□□ -0.35
PCDHB2-202ENST00000622947 A0A0J9YXY3 114 aa12.85□□□□□ -0.35
PCDHB2-202ENST00000622947 PRB2P02812 416 aaPredicted RBP12.85□□□□□ -0.35
PCDHB2-202ENST00000622947 DGAT2L7PQ6IED9 249 aa12.85□□□□□ -0.35
PCDHB2-202ENST00000622947 LINC00643Q86TS7 51 aa12.85□□□□□ -0.35
PCDHB2-202ENST00000622947 TINCRA0A1B0GVN0 87 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 IGHV3-64A0A075B6Q5 118 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 A0A096LPF7 62 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 CLEC2BQ92478 149 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 MDFIQ99750 246 aa12.84□□□□□ -0.35
PCDHB2-202ENST00000622947 PAX4O43316 350 aa12.83□□□□□ -0.36
PCDHB2-202ENST00000622947 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
PCDHB2-202ENST00000622947 COX7CP15954 63 aa12.82□□□□□ -0.36
PCDHB2-202ENST00000622947 MGAM2Q2M2H8 2515 aa12.82□□□□□ -0.36
PCDHB2-202ENST00000622947 COX6A2Q02221 97 aa12.82□□□□□ -0.36
PCDHB2-202ENST00000622947 CXCL5P42830 114 aa12.81□□□□□ -0.36
PCDHB2-202ENST00000622947 GAGE2AQ6NT46 116 aa12.81□□□□□ -0.36
PCDHB2-202ENST00000622947 LITAFQ99732 161 aa12.81□□□□□ -0.36
PCDHB2-202ENST00000622947 UBE2L6O14933 153 aa12.81□□□□□ -0.36
PCDHB2-202ENST00000622947 CRYGAP11844 174 aa12.81□□□□□ -0.36
PCDHB2-202ENST00000622947 IGLV4-60A0A075B6I1 120 aa12.8□□□□□ -0.36
PCDHB2-202ENST00000622947 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
PCDHB2-202ENST00000622947 SMCR5Q8TEV8 140 aa12.8□□□□□ -0.36
PCDHB2-202ENST00000622947 LINC00242Q5T6M2 205 aa12.8□□□□□ -0.36
PCDHB2-202ENST00000622947 F5H768 121 aa12.79□□□□□ -0.36
PCDHB2-202ENST00000622947 IGHV3-30-3P0DP02 117 aa12.79□□□□□ -0.36
PCDHB2-202ENST00000622947 HTN3P15516 51 aa12.79□□□□□ -0.36
PCDHB2-202ENST00000622947 CDKN2A-AS1Q9UH64 79 aa12.79□□□□□ -0.36
PCDHB2-202ENST00000622947 PRSS2P07478 247 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 TIRAPP58753 221 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 C5orf38Q86SI9 138 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 TRAV13-1A0A0B4J241 112 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 IGHV1-58A0A0C4DH39 117 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 SDIM1Q6ZPB5 146 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 C2orf48Q96LS8 159 aa12.78□□□□□ -0.36
PCDHB2-202ENST00000622947 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.36
PCDHB2-202ENST00000622947 HUWE1Q7Z6Z7 4374 aaKnown RBP12.77□□□□□ -0.37
PCDHB2-202ENST00000622947 MIAQ16674 131 aa12.76□□□□□ -0.37
PCDHB2-202ENST00000622947 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
PCDHB2-202ENST00000622947 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
PCDHB2-202ENST00000622947 K7EIL1 84 aa12.74□□□□□ -0.37
PCDHB2-202ENST00000622947 ATOX1O00244 68 aa12.73□□□□□ -0.37
PCDHB2-202ENST00000622947 A0A0J9YWU9 116 aa12.72□□□□□ -0.37
PCDHB2-202ENST00000622947 TRACP01848 142 aa12.72□□□□□ -0.37
PCDHB2-202ENST00000622947 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
PCDHB2-202ENST00000622947 Q8N3U1 123 aa12.72□□□□□ -0.37
PCDHB2-202ENST00000622947 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
PCDHB2-202ENST00000622947 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.37
PCDHB2-202ENST00000622947 Q6ZTC4 211 aa12.71□□□□□ -0.37
PCDHB2-202ENST00000622947 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
PCDHB2-202ENST00000622947 hADV29S1A0JD25 119 aa12.7□□□□□ -0.38
PCDHB2-202ENST00000622947 TMEM258P61165 79 aa12.7□□□□□ -0.38
PCDHB2-202ENST00000622947 DPH3Q96FX2 82 aa12.69□□□□□ -0.38
PCDHB2-202ENST00000622947 IGLV5-39A0A0G2JS06 123 aa12.68□□□□□ -0.38
PCDHB2-202ENST00000622947 KPRPQ5T749 579 aaPredicted RBP12.68□□□□□ -0.38
PCDHB2-202ENST00000622947 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
PCDHB2-202ENST00000622947 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
PCDHB2-202ENST00000622947 DAND5Q8N907 189 aa12.68□□□□□ -0.38
PCDHB2-202ENST00000622947 NPC2P61916 151 aa12.67□□□□□ -0.38
PCDHB2-202ENST00000622947 TIMM17BO60830 172 aa12.66□□□□□ -0.38
PCDHB2-202ENST00000622947 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
PCDHB2-202ENST00000622947 MRAPQ8TCY5 172 aa12.66□□□□□ -0.38
PCDHB2-202ENST00000622947 COX7A2LO14548 114 aa12.66□□□□□ -0.38
PCDHB2-202ENST00000622947 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
PCDHB2-202ENST00000622947 CLPSL2Q6UWE3 100 aa12.65□□□□□ -0.38
PCDHB2-202ENST00000622947 TM2D3Q9BRN9 247 aa12.65□□□□□ -0.38
PCDHB2-202ENST00000622947 LINC00959A0A1B0GUT2 108 aa12.64□□□□□ -0.39
PCDHB2-202ENST00000622947 IGHV3OR16-9A0A0B4J2B5 98 aa12.64□□□□□ -0.39
PCDHB2-202ENST00000622947 NDUFA1O15239 70 aa12.64□□□□□ -0.39
PCDHB2-202ENST00000622947 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
PCDHB2-202ENST00000622947 CYSTM1Q9H1C7 97 aa12.63□□□□□ -0.39
PCDHB2-202ENST00000622947 DNAH9Q9NYC9 4486 aa12.63□□□□□ -0.39
PCDHB2-202ENST00000622947 INAFM2P0DMQ5 153 aa12.62□□□□□ -0.39
PCDHB2-202ENST00000622947 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
PCDHB2-202ENST00000622947 BAALC-AS2P0C853 105 aa12.61□□□□□ -0.39
PCDHB2-202ENST00000622947 LELP1Q5T871 98 aa12.61□□□□□ -0.39
PCDHB2-202ENST00000622947 C11orf45Q8TAV5 145 aa12.61□□□□□ -0.39
PCDHB2-202ENST00000622947 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
PCDHB2-202ENST00000622947 SERP2Q8N6R1 65 aa12.6□□□□□ -0.39
PCDHB2-202ENST00000622947 UPK3BQ9BT76 320 aa12.6□□□□□ -0.39
PCDHB2-202ENST00000622947 H3BNG1 76 aa12.59□□□□□ -0.39
PCDHB2-202ENST00000622947 OXTP01178 125 aa12.59□□□□□ -0.39
PCDHB2-202ENST00000622947 C4orf26Q17RF5 130 aa12.59□□□□□ -0.39
PCDHB2-202ENST00000622947 Q9H8V8 135 aa12.59□□□□□ -0.39
PCDHB2-202ENST00000622947 C22orf24Q9Y442 160 aa12.58□□□□□ -0.39
PCDHB2-202ENST00000622947 DEFB131BA0A096LNP1 70 aa12.58□□□□□ -0.4
PCDHB2-202ENST00000622947 XCL1P47992 114 aa12.58□□□□□ -0.4
PCDHB2-202ENST00000622947 ANGP03950 147 aaKnown RBP12.57□□□□□ -0.4
PCDHB2-202ENST00000622947 Q5XG85 94 aa12.57□□□□□ -0.4
PCDHB2-202ENST00000622947 ZNF625Q96I27 306 aaPredicted RBP12.57□□□□□ -0.4
PCDHB2-202ENST00000622947 A0A087WZ39 114 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms