RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FHL2Q14192 279 aa6.63□□□□□ -1.35
GGA3-223ENST00000621870 LINC00308Q8TCZ7 52 aa6.63□□□□□ -1.35
GGA3-223ENST00000621870 NBEAQ8NFP9 2946 aa6.63□□□□□ -1.35
GGA3-223ENST00000621870 IGLV4-69A0A075B6H9 119 aa6.62□□□□□ -1.35
GGA3-223ENST00000621870 C6orf99Q4VX62 202 aa6.62□□□□□ -1.35
GGA3-223ENST00000621870 MAPKAPK5-AS1Q8N8E1 139 aa6.62□□□□□ -1.35
GGA3-223ENST00000621870 WFDC2Q14508 124 aa6.62□□□□□ -1.35
GGA3-223ENST00000621870 IGLV4-60A0A075B6I1 120 aa6.62□□□□□ -1.35
GGA3-223ENST00000621870 RBM3P98179 157 aaKnown RBP6.62□□□□□ -1.35
GGA3-223ENST00000621870 CYSRT1A8MQ03 144 aa6.61□□□□□ -1.35
GGA3-223ENST00000621870 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
GGA3-223ENST00000621870 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
GGA3-223ENST00000621870 FHL3Q13643 280 aa6.61□□□□□ -1.35
GGA3-223ENST00000621870 UNQ6190/PRO20217Q6UXQ8 127 aa6.61□□□□□ -1.35
GGA3-223ENST00000621870 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 SPANXDQ9BXN6 97 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 NSD1Q96L73 2696 aaPredicted RBP6.6□□□□□ -1.35
GGA3-223ENST00000621870 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 PTH2Q96A98 100 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 URB1-AS1Q96HZ7 61 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 IGKV3D-7A0A0C4DH55 119 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
GGA3-223ENST00000621870 C2orf91Q6ZV80 131 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 WFDC10BQ8IUB3 73 aa6.6□□□□□ -1.35
GGA3-223ENST00000621870 RPL37AP8A6NKH3 93 aa6.59□□□□□ -1.35
GGA3-223ENST00000621870 UBE2D1P51668 147 aa6.59□□□□□ -1.35
GGA3-223ENST00000621870 Q6ZSN1 163 aa6.59□□□□□ -1.35
GGA3-223ENST00000621870 TMEM256-PLSCR3K7ERE1 68 aa6.59□□□□□ -1.35
GGA3-223ENST00000621870 SLPIP03973 132 aa6.59□□□□□ -1.35
GGA3-223ENST00000621870 H0Y9J4 135 aa6.58□□□□□ -1.36
GGA3-223ENST00000621870 TEN1Q86WV5 123 aa6.58□□□□□ -1.36
GGA3-223ENST00000621870 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
GGA3-223ENST00000621870 CHCHD7Q9BUK0 85 aa6.58□□□□□ -1.36
GGA3-223ENST00000621870 NHLRC4P0CG21 123 aaPredicted RBP6.58□□□□□ -1.36
GGA3-223ENST00000621870 SPANXB1Q9NS25 103 aaPredicted RBP6.58□□□□□ -1.36
GGA3-223ENST00000621870 CELA1Q9UNI1 258 aa6.58□□□□□ -1.36
GGA3-223ENST00000621870 IGIPA6NJ69 53 aa6.57□□□□□ -1.36
GGA3-223ENST00000621870 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
GGA3-223ENST00000621870 FSHBP01225 129 aa6.57□□□□□ -1.36
GGA3-223ENST00000621870 USP17L23D6RBM5 183 aa6.57□□□□□ -1.36
GGA3-223ENST00000621870 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
GGA3-223ENST00000621870 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
GGA3-223ENST00000621870 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
GGA3-223ENST00000621870 H3BT86 120 aa6.56□□□□□ -1.36
GGA3-223ENST00000621870 LYPD5Q6UWN5 251 aa6.56□□□□□ -1.36
GGA3-223ENST00000621870 SBSPONQ8IVN8 264 aa6.56□□□□□ -1.36
GGA3-223ENST00000621870 C6orf223Q8N319 242 aa6.56□□□□□ -1.36
GGA3-223ENST00000621870 Q6ZQY7 126 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 RELNP78509 3460 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 A0A0B4J2C4 111 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 Q8IZM0 81 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 ITPR2Q14571 2701 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 H3BQ85 93 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 COX6A2Q02221 97 aa6.55□□□□□ -1.36
GGA3-223ENST00000621870 TCL1BO95988 128 aa6.54□□□□□ -1.36
GGA3-223ENST00000621870 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
GGA3-223ENST00000621870 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
GGA3-223ENST00000621870 M0R378 163 aa6.54□□□□□ -1.36
GGA3-223ENST00000621870 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
GGA3-223ENST00000621870 IGLV5-52A0A0A0MRZ9 124 aa6.53□□□□□ -1.36
GGA3-223ENST00000621870 A0A1B0GX51 115 aa6.53□□□□□ -1.36
GGA3-223ENST00000621870 COL27A1Q8IZC6 1860 aaPredicted RBP6.53□□□□□ -1.36
GGA3-223ENST00000621870 TRIAP1O43715 76 aa6.53□□□□□ -1.36
GGA3-223ENST00000621870 ACYP1P07311 99 aa6.53□□□□□ -1.36
GGA3-223ENST00000621870 EGFEM1PQ0D2K5 195 aa6.53□□□□□ -1.36
GGA3-223ENST00000621870 ITPR1Q14643 2758 aa6.52□□□□□ -1.37
GGA3-223ENST00000621870 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
GGA3-223ENST00000621870 LINC00474Q9P2X8 69 aa6.52□□□□□ -1.37
GGA3-223ENST00000621870 PLAC8L1A1L4L8 177 aa6.51□□□□□ -1.37
GGA3-223ENST00000621870 M0QXV9 152 aa6.51□□□□□ -1.37
GGA3-223ENST00000621870 PDE6GP18545 87 aa6.51□□□□□ -1.37
GGA3-223ENST00000621870 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
GGA3-223ENST00000621870 BPY2O14599 106 aa6.51□□□□□ -1.37
GGA3-223ENST00000621870 UTP20O75691 2785 aaKnown RBP6.51□□□□□ -1.37
GGA3-223ENST00000621870 CCKP06307 115 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
GGA3-223ENST00000621870 CRYBG3Q68DQ2 2970 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 A0A096LNT2 108 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 TIMM17BO60830 172 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 MDFIQ99750 246 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
GGA3-223ENST00000621870 WFDC9Q8NEX5 89 aa6.5□□□□□ -1.37
GGA3-223ENST00000621870 A0A1B0GUV1 79 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 ESRGQ1W209 222 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
GGA3-223ENST00000621870 SCXQ7RTU7 201 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 Q9UF83 564 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 X6R8D5 127 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 LRBAP50851 2863 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
GGA3-223ENST00000621870 TEX49A0A1B0GTD5 131 aa6.48□□□□□ -1.37
GGA3-223ENST00000621870 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
GGA3-223ENST00000621870 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
GGA3-223ENST00000621870 MP68P56378 58 aa6.48□□□□□ -1.37
GGA3-223ENST00000621870 COX17Q14061 63 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms