RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 A0A087WYN8 130 aa11.41□□□□□ -0.58
SCAMP4-213ENST00000621748 KRTDAPP60985 99 aa11.41□□□□□ -0.58
SCAMP4-213ENST00000621748 FAM19A3Q7Z5A8 133 aa11.41□□□□□ -0.58
SCAMP4-213ENST00000621748 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
SCAMP4-213ENST00000621748 DPH3Q96FX2 82 aa11.41□□□□□ -0.58
SCAMP4-213ENST00000621748 F8VRH5 84 aa11.4□□□□□ -0.58
SCAMP4-213ENST00000621748 ZNF561-AS1K7EIQ3 104 aa11.4□□□□□ -0.58
SCAMP4-213ENST00000621748 HIST3H2BBQ8N257 126 aa11.4□□□□□ -0.58
SCAMP4-213ENST00000621748 LINC00526Q96FQ7 95 aa11.4□□□□□ -0.58
SCAMP4-213ENST00000621748 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
SCAMP4-213ENST00000621748 PRSS2P07478 247 aa11.39□□□□□ -0.59
SCAMP4-213ENST00000621748 PLNP26678 52 aa11.39□□□□□ -0.59
SCAMP4-213ENST00000621748 TMEM170BQ5T4T1 132 aa11.39□□□□□ -0.59
SCAMP4-213ENST00000621748 PET117Q6UWS5 81 aa11.39□□□□□ -0.59
SCAMP4-213ENST00000621748 A0A087WZ39 114 aa11.38□□□□□ -0.59
SCAMP4-213ENST00000621748 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
SCAMP4-213ENST00000621748 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
SCAMP4-213ENST00000621748 AKR1D1P51857 326 aa11.38□□□□□ -0.59
SCAMP4-213ENST00000621748 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
SCAMP4-213ENST00000621748 LINC01561Q8N1V8 128 aa11.38□□□□□ -0.59
SCAMP4-213ENST00000621748 DPM2O94777 84 aa11.37□□□□□ -0.59
SCAMP4-213ENST00000621748 OR10D4PQ8NGN7 298 aa11.37□□□□□ -0.59
SCAMP4-213ENST00000621748 ORAOV1Q8WV07 137 aa11.37□□□□□ -0.59
SCAMP4-213ENST00000621748 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
SCAMP4-213ENST00000621748 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
SCAMP4-213ENST00000621748 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
SCAMP4-213ENST00000621748 C5orf52A6NGY3 159 aa11.36□□□□□ -0.59
SCAMP4-213ENST00000621748 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
SCAMP4-213ENST00000621748 HERVK_113P61574 105 aa11.35□□□□□ -0.59
SCAMP4-213ENST00000621748 ODF1Q14990 250 aa11.35□□□□□ -0.59
SCAMP4-213ENST00000621748 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
SCAMP4-213ENST00000621748 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
SCAMP4-213ENST00000621748 A0A096LNI7 61 aa11.34□□□□□ -0.59
SCAMP4-213ENST00000621748 IGKCP01834 107 aa11.34□□□□□ -0.59
SCAMP4-213ENST00000621748 C3orf79P0CE67 100 aa11.34□□□□□ -0.59
SCAMP4-213ENST00000621748 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
SCAMP4-213ENST00000621748 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
SCAMP4-213ENST00000621748 IGLV4-69A0A075B6H9 119 aa11.33□□□□□ -0.6
SCAMP4-213ENST00000621748 C11orf86A6NJI1 115 aa11.33□□□□□ -0.6
SCAMP4-213ENST00000621748 CKS1BP61024 79 aa11.33□□□□□ -0.6
SCAMP4-213ENST00000621748 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
SCAMP4-213ENST00000621748 CARD19Q96LW7 228 aa11.33□□□□□ -0.6
SCAMP4-213ENST00000621748 IGLV5-45A0A087WSX0 123 aa11.32□□□□□ -0.6
SCAMP4-213ENST00000621748 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
SCAMP4-213ENST00000621748 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
SCAMP4-213ENST00000621748 F8WDY8 70 aa11.31□□□□□ -0.6
SCAMP4-213ENST00000621748 OXTP01178 125 aa11.31□□□□□ -0.6
SCAMP4-213ENST00000621748 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
SCAMP4-213ENST00000621748 STPG4Q8N801 248 aa11.31□□□□□ -0.6
SCAMP4-213ENST00000621748 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
SCAMP4-213ENST00000621748 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
SCAMP4-213ENST00000621748 PKIGQ9Y2B9 76 aa11.3□□□□□ -0.6
SCAMP4-213ENST00000621748 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
SCAMP4-213ENST00000621748 Q6ZRU5 148 aa11.29□□□□□ -0.6
SCAMP4-213ENST00000621748 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
SCAMP4-213ENST00000621748 NDUFA1O15239 70 aa11.28□□□□□ -0.6
SCAMP4-213ENST00000621748 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
SCAMP4-213ENST00000621748 Q8IZM0 81 aa11.28□□□□□ -0.6
SCAMP4-213ENST00000621748 COX7B2Q8TF08 81 aa11.28□□□□□ -0.6
SCAMP4-213ENST00000621748 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
SCAMP4-213ENST00000621748 CXCL5P42830 114 aa11.27□□□□□ -0.61
SCAMP4-213ENST00000621748 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
SCAMP4-213ENST00000621748 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
SCAMP4-213ENST00000621748 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
SCAMP4-213ENST00000621748 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
SCAMP4-213ENST00000621748 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
SCAMP4-213ENST00000621748 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
SCAMP4-213ENST00000621748 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
SCAMP4-213ENST00000621748 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
SCAMP4-213ENST00000621748 LGALS3P17931 250 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-213ENST00000621748 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
SCAMP4-213ENST00000621748 IGLV5-39A0A0G2JS06 123 aa11.21□□□□□ -0.61
SCAMP4-213ENST00000621748 LEPROTO15243 131 aa11.21□□□□□ -0.61
SCAMP4-213ENST00000621748 HMCN2Q8NDA2 5059 aa11.21□□□□□ -0.62
SCAMP4-213ENST00000621748 PRR3P79522 188 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-213ENST00000621748 KIAA0087Q14695 138 aa11.2□□□□□ -0.62
SCAMP4-213ENST00000621748 TRBV30A0A0K0K1B3 111 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 RNF151Q2KHN1 245 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 ATOH7Q8N100 152 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 TNXBP22105 4242 aa11.19□□□□□ -0.62
SCAMP4-213ENST00000621748 MYMXA0A1B0GTQ4 84 aa11.18□□□□□ -0.62
SCAMP4-213ENST00000621748 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
SCAMP4-213ENST00000621748 E9PLD3 99 aa11.17□□□□□ -0.62
SCAMP4-213ENST00000621748 J3QQQ9 107 aa11.17□□□□□ -0.62
SCAMP4-213ENST00000621748 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
SCAMP4-213ENST00000621748 C10orf25Q5T742 122 aa11.17□□□□□ -0.62
SCAMP4-213ENST00000621748 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
SCAMP4-213ENST00000621748 NMUP48645 174 aa11.16□□□□□ -0.62
SCAMP4-213ENST00000621748 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
SCAMP4-213ENST00000621748 HERV-K104P63124 156 aa11.15□□□□□ -0.62
SCAMP4-213ENST00000621748 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-213ENST00000621748 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
SCAMP4-213ENST00000621748 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
SCAMP4-213ENST00000621748 JOSD1Q15040 202 aaPredicted RBP11.13□□□□□ -0.63
SCAMP4-213ENST00000621748 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
SCAMP4-213ENST00000621748 Q6ZRP5 223 aa11.12□□□□□ -0.63
SCAMP4-213ENST00000621748 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 619.9 ms