RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SBSPONQ8IVN8 264 aa7.15□□□□□ -1.26
COL4A6-210ENST00000621266 CIRBP-AS1Q8TBR5 109 aa7.15□□□□□ -1.26
COL4A6-210ENST00000621266 SMIM1B2RUZ4 78 aa7.15□□□□□ -1.26
COL4A6-210ENST00000621266 HCG22E2RYF7 251 aa7.15□□□□□ -1.26
COL4A6-210ENST00000621266 PRR14LQ5THK1 2151 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 LINC01006Q8NI28 216 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 hDV103S1A0JD37 113 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 NAV3Q8IVL0 2385 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 CXCL6P80162 114 aa7.14□□□□□ -1.27
COL4A6-210ENST00000621266 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 ARHGAP32A7KAX9 2087 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 A0A1B0GU69 56 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 A8MTW9 85 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 SRCAPQ6ZRS2 3230 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 DSCAMO60469 2012 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 HIVEP3Q5T1R4 2406 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 ZNF702PQ9H963 129 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 PLXNB1O43157 2135 aa7.13□□□□□ -1.27
COL4A6-210ENST00000621266 RAI1Q7Z5J4 1906 aaPredicted RBP7.13□□□□□ -1.27
COL4A6-210ENST00000621266 A0A087WSZ3 146 aa7.12□□□□□ -1.27
COL4A6-210ENST00000621266 LELP1Q5T871 98 aa7.12□□□□□ -1.27
COL4A6-210ENST00000621266 KLLNB2CW77 178 aa7.12□□□□□ -1.27
COL4A6-210ENST00000621266 REG3GQ6UW15 175 aa7.12□□□□□ -1.27
COL4A6-210ENST00000621266 PRLHP81277 87 aa7.11□□□□□ -1.27
COL4A6-210ENST00000621266 KPRPQ5T749 579 aaPredicted RBP7.11□□□□□ -1.27
COL4A6-210ENST00000621266 PCNX3Q9H6A9 2034 aa7.11□□□□□ -1.27
COL4A6-210ENST00000621266 CHCHD7Q9BUK0 85 aa7.1□□□□□ -1.27
COL4A6-210ENST00000621266 Q9BRP9 147 aa7.1□□□□□ -1.27
COL4A6-210ENST00000621266 PIEZO2Q9H5I5 2752 aa7.1□□□□□ -1.27
COL4A6-210ENST00000621266 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
COL4A6-210ENST00000621266 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
COL4A6-210ENST00000621266 PSMG3-AS1Q96PY0 264 aa7.09□□□□□ -1.27
COL4A6-210ENST00000621266 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
COL4A6-210ENST00000621266 ADAMTS20P59510 1910 aa7.09□□□□□ -1.27
COL4A6-210ENST00000621266 A0A096LNJ9 63 aa7.09□□□□□ -1.27
COL4A6-210ENST00000621266 MUC7Q8TAX7 377 aa7.09□□□□□ -1.27
COL4A6-210ENST00000621266 C8orf87E5RJ46 101 aa7.09□□□□□ -1.28
COL4A6-210ENST00000621266 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
COL4A6-210ENST00000621266 C6orf223Q8N319 242 aa7.08□□□□□ -1.28
COL4A6-210ENST00000621266 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
COL4A6-210ENST00000621266 TLN1Q9Y490 2541 aaKnown RBP7.07□□□□□ -1.28
COL4A6-210ENST00000621266 TRAV10A0A0B4J240 114 aa7.07□□□□□ -1.28
COL4A6-210ENST00000621266 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
COL4A6-210ENST00000621266 ABCA2Q9BZC7 2435 aa7.07□□□□□ -1.28
COL4A6-210ENST00000621266 FSHBP01225 129 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 MDFIQ99750 246 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 LRP4O75096 1905 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 AVPP01185 164 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 EDN2P20800 178 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 SORL1Q92673 2214 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 BRI3O95415 125 aa7.06□□□□□ -1.28
COL4A6-210ENST00000621266 EML5Q05BV3 1969 aa7.05□□□□□ -1.28
COL4A6-210ENST00000621266 EGFEM1PQ0D2K5 195 aa7.05□□□□□ -1.28
COL4A6-210ENST00000621266 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
COL4A6-210ENST00000621266 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
COL4A6-210ENST00000621266 AMELXQ99217 191 aa7.05□□□□□ -1.28
COL4A6-210ENST00000621266 LINC00337Q8N6G1 96 aa7.04□□□□□ -1.28
COL4A6-210ENST00000621266 GOLGB1Q14789 3259 aaKnown RBP7.04□□□□□ -1.28
COL4A6-210ENST00000621266 MRGPRG-AS1Q2M3A8 158 aa7.04□□□□□ -1.28
COL4A6-210ENST00000621266 IGLV1-40P01703 118 aa7.03□□□□□ -1.28
COL4A6-210ENST00000621266 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
COL4A6-210ENST00000621266 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
COL4A6-210ENST00000621266 Q6ZTC4 211 aa7.02□□□□□ -1.28
COL4A6-210ENST00000621266 SPATA3Q8NHX4 192 aa7.02□□□□□ -1.29
COL4A6-210ENST00000621266 MYO9AB2RTY4 2548 aa7.02□□□□□ -1.29
COL4A6-210ENST00000621266 ACYP2P14621 99 aa7.01□□□□□ -1.29
COL4A6-210ENST00000621266 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
COL4A6-210ENST00000621266 Q6ZSN1 163 aa7.01□□□□□ -1.29
COL4A6-210ENST00000621266 NUPR2A6NF83 97 aa7□□□□□ -1.29
COL4A6-210ENST00000621266 TM2D3Q9BRN9 247 aa7□□□□□ -1.29
COL4A6-210ENST00000621266 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
COL4A6-210ENST00000621266 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
COL4A6-210ENST00000621266 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
COL4A6-210ENST00000621266 KIAA0087Q14695 138 aa6.99□□□□□ -1.29
COL4A6-210ENST00000621266 PRO0461Q9UI25 63 aa6.99□□□□□ -1.29
COL4A6-210ENST00000621266 FHL2Q14192 279 aa6.99□□□□□ -1.29
COL4A6-210ENST00000621266 PRRC2AP48634 2157 aaKnown RBP6.99□□□□□ -1.29
COL4A6-210ENST00000621266 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
COL4A6-210ENST00000621266 A8MUN3 132 aa6.98□□□□□ -1.29
COL4A6-210ENST00000621266 Q8N2B8 174 aa6.98□□□□□ -1.29
COL4A6-210ENST00000621266 C2CD3Q4AC94 2353 aa6.97□□□□□ -1.29
COL4A6-210ENST00000621266 ATG2AQ2TAZ0 1938 aa6.96□□□□□ -1.3
COL4A6-210ENST00000621266 A0A1W2PPR1 153 aa6.95□□□□□ -1.3
COL4A6-210ENST00000621266 BCE1O60756 84 aa6.95□□□□□ -1.3
COL4A6-210ENST00000621266 CEP295Q9C0D2 2601 aa6.95□□□□□ -1.3
COL4A6-210ENST00000621266 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
COL4A6-210ENST00000621266 Q6ZRU5 148 aa6.94□□□□□ -1.3
COL4A6-210ENST00000621266 SMCR5Q8TEV8 140 aa6.94□□□□□ -1.3
COL4A6-210ENST00000621266 CD164Q04900 197 aa6.94□□□□□ -1.3
COL4A6-210ENST00000621266 CPAMD8Q8IZJ3 1885 aa6.93□□□□□ -1.3
COL4A6-210ENST00000621266 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
COL4A6-210ENST00000621266 AGRNO00468 2067 aa6.93□□□□□ -1.3
COL4A6-210ENST00000621266 EXPH5Q8NEV8 1989 aa6.93□□□□□ -1.3
COL4A6-210ENST00000621266 LINC00336Q6ZUF6 198 aa6.92□□□□□ -1.3
COL4A6-210ENST00000621266 ODF3L2Q3SX64 289 aa6.92□□□□□ -1.3
COL4A6-210ENST00000621266 Q6ZQT0 140 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms