RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
SMC6-210ENST00000621152 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
SMC6-210ENST00000621152 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
SMC6-210ENST00000621152 COMMD7Q86VX2 200 aa12.53□□□□□ -0.4
SMC6-210ENST00000621152 Q8IZM0 81 aa12.53□□□□□ -0.4
SMC6-210ENST00000621152 M0QXV9 152 aa12.51□□□□□ -0.41
SMC6-210ENST00000621152 TNXBP22105 4242 aa12.51□□□□□ -0.41
SMC6-210ENST00000621152 UBE2BP63146 152 aa12.5□□□□□ -0.41
SMC6-210ENST00000621152 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
SMC6-210ENST00000621152 COX19Q49B96 90 aa12.5□□□□□ -0.41
SMC6-210ENST00000621152 LINC00469Q8N7U9 141 aa12.5□□□□□ -0.41
SMC6-210ENST00000621152 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
SMC6-210ENST00000621152 LINC01546A6NGU7 62 aa12.49□□□□□ -0.41
SMC6-210ENST00000621152 MRPL18Q9H0U6 180 aaKnown RBP12.49□□□□□ -0.41
SMC6-210ENST00000621152 RPS10P5Q9NQ39 176 aa12.49□□□□□ -0.41
SMC6-210ENST00000621152 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
SMC6-210ENST00000621152 C10orf91Q5T1B1 145 aa12.48□□□□□ -0.41
SMC6-210ENST00000621152 FA2HQ7L5A8 372 aa12.47□□□□□ -0.41
SMC6-210ENST00000621152 CST9LQ9H4G1 147 aa12.47□□□□□ -0.41
SMC6-210ENST00000621152 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
SMC6-210ENST00000621152 F8VRH5 84 aa12.46□□□□□ -0.41
SMC6-210ENST00000621152 XAGE1AQ9HD64 81 aa12.46□□□□□ -0.41
SMC6-210ENST00000621152 SMCO4Q9NRQ5 59 aa12.46□□□□□ -0.41
SMC6-210ENST00000621152 RHEBQ15382 184 aa12.45□□□□□ -0.42
SMC6-210ENST00000621152 SMIM1B2RUZ4 78 aa12.44□□□□□ -0.42
SMC6-210ENST00000621152 PMVKQ15126 192 aa12.44□□□□□ -0.42
SMC6-210ENST00000621152 PDZD11Q5EBL8 140 aa12.44□□□□□ -0.42
SMC6-210ENST00000621152 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
SMC6-210ENST00000621152 C22orf24Q9Y442 160 aa12.44□□□□□ -0.42
SMC6-210ENST00000621152 H0Y9J4 135 aa12.43□□□□□ -0.42
SMC6-210ENST00000621152 CXCL5P42830 114 aa12.43□□□□□ -0.42
SMC6-210ENST00000621152 COX7B2Q8TF08 81 aa12.43□□□□□ -0.42
SMC6-210ENST00000621152 PRR26Q8N8Z3 221 aa12.42□□□□□ -0.42
SMC6-210ENST00000621152 IGLV5-45A0A087WSX0 123 aa12.41□□□□□ -0.42
SMC6-210ENST00000621152 LBHQ53QV2 105 aaPredicted RBP12.41□□□□□ -0.42
SMC6-210ENST00000621152 UBR4Q5T4S7 5183 aa12.41□□□□□ -0.42
SMC6-210ENST00000621152 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
SMC6-210ENST00000621152 TRAPPC1Q9Y5R8 145 aa12.4□□□□□ -0.42
SMC6-210ENST00000621152 NDUFA6P56556 154 aa12.38□□□□□ -0.43
SMC6-210ENST00000621152 RAB5BP61020 215 aa12.38□□□□□ -0.43
SMC6-210ENST00000621152 LINC00614P0C842 121 aa12.37□□□□□ -0.43
SMC6-210ENST00000621152 H3BRM9 83 aa12.36□□□□□ -0.43
SMC6-210ENST00000621152 ZNF861PO60384 105 aa12.35□□□□□ -0.43
SMC6-210ENST00000621152 APOC3P02656 99 aa12.35□□□□□ -0.43
SMC6-210ENST00000621152 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
SMC6-210ENST00000621152 C18orf32Q8TCD1 76 aa12.35□□□□□ -0.43
SMC6-210ENST00000621152 URB1-AS1Q96HZ7 61 aa12.35□□□□□ -0.43
SMC6-210ENST00000621152 A0A096LNJ9 63 aa12.34□□□□□ -0.43
SMC6-210ENST00000621152 NUPR1O60356 82 aa12.34□□□□□ -0.43
SMC6-210ENST00000621152 KRTAP1-4P0C5Y4 121 aa12.34□□□□□ -0.43
SMC6-210ENST00000621152 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
SMC6-210ENST00000621152 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.44
SMC6-210ENST00000621152 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
SMC6-210ENST00000621152 PMCHL1Q16048 86 aa12.32□□□□□ -0.44
SMC6-210ENST00000621152 LINC00167Q96N53 147 aa12.32□□□□□ -0.44
SMC6-210ENST00000621152 HBDP02042 147 aa12.31□□□□□ -0.44
SMC6-210ENST00000621152 RPL37AP8A6NKH3 93 aa12.3□□□□□ -0.44
SMC6-210ENST00000621152 ATP5LO75964 103 aa12.3□□□□□ -0.44
SMC6-210ENST00000621152 SNAPINO95295 136 aa12.3□□□□□ -0.44
SMC6-210ENST00000621152 NDUFA5Q16718 116 aa12.29□□□□□ -0.44
SMC6-210ENST00000621152 SVBPQ8N300 66 aa12.29□□□□□ -0.44
SMC6-210ENST00000621152 IGLV5-39A0A0G2JS06 123 aa12.28□□□□□ -0.44
SMC6-210ENST00000621152 GAGE10A6NGK3 116 aa12.28□□□□□ -0.44
SMC6-210ENST00000621152 ZNF22P17026 224 aaPredicted RBP12.28□□□□□ -0.44
SMC6-210ENST00000621152 PFN2P35080 140 aa12.28□□□□□ -0.44
SMC6-210ENST00000621152 BAGE3Q86Y29 109 aa12.28□□□□□ -0.44
SMC6-210ENST00000621152 BCE1O60756 84 aa12.27□□□□□ -0.45
SMC6-210ENST00000621152 RPL13AP40429 203 aaKnown RBP12.25□□□□□ -0.45
SMC6-210ENST00000621152 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
SMC6-210ENST00000621152 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
SMC6-210ENST00000621152 IGLV5-37A0A075B6J1 123 aa12.24□□□□□ -0.45
SMC6-210ENST00000621152 LRP2P98164 4655 aa12.23□□□□□ -0.45
SMC6-210ENST00000621152 C11orf86A6NJI1 115 aa12.23□□□□□ -0.45
SMC6-210ENST00000621152 TMEM170BQ5T4T1 132 aa12.23□□□□□ -0.45
SMC6-210ENST00000621152 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
SMC6-210ENST00000621152 ERG28Q9UKR5 140 aa12.22□□□□□ -0.45
SMC6-210ENST00000621152 SCO1O75880 301 aa12.21□□□□□ -0.45
SMC6-210ENST00000621152 SND1-IT1Q9HBX3 110 aa12.2□□□□□ -0.46
SMC6-210ENST00000621152 CHTOPQ9Y3Y2 248 aaKnown RBP12.2□□□□□ -0.46
SMC6-210ENST00000621152 COX17Q14061 63 aa12.19□□□□□ -0.46
SMC6-210ENST00000621152 YPEL4Q96NS1 127 aa12.19□□□□□ -0.46
SMC6-210ENST00000621152 CHCHD1Q96BP2 118 aaKnown RBP12.18□□□□□ -0.46
SMC6-210ENST00000621152 IGKV2-28A0A075B6P5 120 aa12.17□□□□□ -0.46
SMC6-210ENST00000621152 IGKV2D-28P01615 120 aa12.17□□□□□ -0.46
SMC6-210ENST00000621152 UBE2AP49459 152 aa12.17□□□□□ -0.46
SMC6-210ENST00000621152 VPREB1P12018 145 aa12.16□□□□□ -0.46
SMC6-210ENST00000621152 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
SMC6-210ENST00000621152 IFI27L1Q96BM0 104 aa12.16□□□□□ -0.46
SMC6-210ENST00000621152 SFTA2Q6UW10 78 aa12.15□□□□□ -0.46
SMC6-210ENST00000621152 A0A087X002 238 aa12.14□□□□□ -0.47
SMC6-210ENST00000621152 CRYGAP11844 174 aa12.14□□□□□ -0.47
SMC6-210ENST00000621152 ANAPC11Q9NYG5 84 aa12.14□□□□□ -0.47
SMC6-210ENST00000621152 TRAV12-1A0A0B4J245 112 aa12.13□□□□□ -0.47
SMC6-210ENST00000621152 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
SMC6-210ENST00000621152 LINC00158P58513 81 aa12.13□□□□□ -0.47
SMC6-210ENST00000621152 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
SMC6-210ENST00000621152 TSPAN13O95857 204 aa12.12□□□□□ -0.47
SMC6-210ENST00000621152 PRR4Q16378 134 aa12.12□□□□□ -0.47
SMC6-210ENST00000621152 TYMSOSQ8TAI1 123 aa12.12□□□□□ -0.47
SMC6-210ENST00000621152 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms