RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 hADV29S1A0JD25 119 aa6.93□□□□□ -1.3
VTA1-205ENST00000620996 LYRM7Q5U5X0 104 aa6.92□□□□□ -1.3
VTA1-205ENST00000620996 TIRAPP58753 221 aa6.91□□□□□ -1.3
VTA1-205ENST00000620996 EGFEM1PQ0D2K5 195 aa6.91□□□□□ -1.3
VTA1-205ENST00000620996 A0A0J9YXY3 114 aa6.91□□□□□ -1.3
VTA1-205ENST00000620996 H7C423 109 aa6.91□□□□□ -1.3
VTA1-205ENST00000620996 XCL1P47992 114 aa6.91□□□□□ -1.3
VTA1-205ENST00000620996 C5orf38Q86SI9 138 aa6.91□□□□□ -1.3
VTA1-205ENST00000620996 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
VTA1-205ENST00000620996 Q8N3U1 123 aa6.9□□□□□ -1.3
VTA1-205ENST00000620996 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.3
VTA1-205ENST00000620996 DAND5Q8N907 189 aa6.9□□□□□ -1.3
VTA1-205ENST00000620996 Q9H8V8 135 aa6.9□□□□□ -1.3
VTA1-205ENST00000620996 ICOSQ9Y6W8 199 aa6.9□□□□□ -1.3
VTA1-205ENST00000620996 A0A0J9YWU9 116 aa6.9□□□□□ -1.31
VTA1-205ENST00000620996 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.31
VTA1-205ENST00000620996 Q6ZTC4 211 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 UBE2WQ96B02 151 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
VTA1-205ENST00000620996 NANOS2P60321 138 aaKnown RBP6.88□□□□□ -1.31
VTA1-205ENST00000620996 Q6Q795 121 aa6.88□□□□□ -1.31
VTA1-205ENST00000620996 LINC00269Q8N2A0 174 aa6.88□□□□□ -1.31
VTA1-205ENST00000620996 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
VTA1-205ENST00000620996 SS18Q15532 418 aa6.88□□□□□ -1.31
VTA1-205ENST00000620996 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
VTA1-205ENST00000620996 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
VTA1-205ENST00000620996 CFC1P0CG37 223 aa6.87□□□□□ -1.31
VTA1-205ENST00000620996 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
VTA1-205ENST00000620996 CIRBPQ14011 172 aaKnown RBP6.87□□□□□ -1.31
VTA1-205ENST00000620996 MGAM2Q2M2H8 2515 aa6.87□□□□□ -1.31
VTA1-205ENST00000620996 SEC61GP60059 68 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 OXTP01178 125 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 C11orf45Q8TAV5 145 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 NDUFA1O15239 70 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 IGHV3-33P01772 117 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
VTA1-205ENST00000620996 UQCRQO14949 82 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 KPRPQ5T749 579 aaPredicted RBP6.85□□□□□ -1.31
VTA1-205ENST00000620996 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 MDFIQ99750 246 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 NBEAL1Q6ZS30 2694 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 TENM3Q9P273 2699 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 CMYA5Q8N3K9 4069 aa6.85□□□□□ -1.31
VTA1-205ENST00000620996 IGLV5-39A0A0G2JS06 123 aa6.84□□□□□ -1.31
VTA1-205ENST00000620996 DEFB131BA0A096LNP1 70 aa6.84□□□□□ -1.31
VTA1-205ENST00000620996 TRACP01848 142 aa6.84□□□□□ -1.31
VTA1-205ENST00000620996 REG3AQ06141 175 aa6.84□□□□□ -1.31
VTA1-205ENST00000620996 KLK12Q9UKR0 248 aa6.84□□□□□ -1.31
VTA1-205ENST00000620996 ANK2Q01484 3957 aa6.84□□□□□ -1.31
VTA1-205ENST00000620996 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 K7EIL1 84 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 MALP21145 153 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 MIAQ16674 131 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 LELP1Q5T871 98 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 FAM19A3Q7Z5A8 133 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
VTA1-205ENST00000620996 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 LYPD5Q6UWN5 251 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 LINC00336Q6ZUF6 198 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 LINC00526Q96FQ7 95 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 LITAFQ99732 161 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 FAM236DA0A1B0GTK5 79 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 F8WDY8 70 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 FAM236CP0DP71 79 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 PFN2P35080 140 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 LINC00158P58513 81 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
VTA1-205ENST00000620996 CLEC2BQ92478 149 aa6.82□□□□□ -1.32
VTA1-205ENST00000620996 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
VTA1-205ENST00000620996 CRPP02741 224 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 A0A087WZ39 114 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 A0A1B0GX51 115 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 RPL13AP40429 203 aaKnown RBP6.81□□□□□ -1.32
VTA1-205ENST00000620996 SPANXDQ9BXN6 97 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 SPANXCQ9NY87 97 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 WFDC10BQ8IUB3 73 aa6.81□□□□□ -1.32
VTA1-205ENST00000620996 COX7A2LO14548 114 aa6.8□□□□□ -1.32
VTA1-205ENST00000620996 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
VTA1-205ENST00000620996 Q5XG85 94 aa6.8□□□□□ -1.32
VTA1-205ENST00000620996 COX7CP15954 63 aa6.79□□□□□ -1.32
VTA1-205ENST00000620996 LINC00308Q8TCZ7 52 aa6.79□□□□□ -1.32
VTA1-205ENST00000620996 TIMM17BO60830 172 aa6.78□□□□□ -1.32
VTA1-205ENST00000620996 CD164L2Q6UWJ8 174 aa6.78□□□□□ -1.32
VTA1-205ENST00000620996 MIR7-3HGQ8N6C7 128 aa6.78□□□□□ -1.32
VTA1-205ENST00000620996 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
VTA1-205ENST00000620996 SMCR5Q8TEV8 140 aa6.78□□□□□ -1.32
VTA1-205ENST00000620996 TRIAP1O43715 76 aa6.77□□□□□ -1.33
VTA1-205ENST00000620996 ESRGQ1W209 222 aa6.77□□□□□ -1.33
VTA1-205ENST00000620996 C2orf48Q96LS8 159 aa6.77□□□□□ -1.33
VTA1-205ENST00000620996 V9GYY9 64 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms