RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 LBHQ53QV2 105 aaPredicted RBP7.22□□□□□ -1.25
UPF3B-204ENST00000619445 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
UPF3B-204ENST00000619445 CTDSP1Q9GZU7 261 aa7.22□□□□□ -1.25
UPF3B-204ENST00000619445 IGIPA6NJ69 53 aa7.21□□□□□ -1.25
UPF3B-204ENST00000619445 NUPR1O60356 82 aa7.21□□□□□ -1.25
UPF3B-204ENST00000619445 PRR26Q8N8Z3 221 aa7.21□□□□□ -1.25
UPF3B-204ENST00000619445 TIMM17AQ99595 171 aa7.21□□□□□ -1.25
UPF3B-204ENST00000619445 ALKBH7Q9BT30 221 aaPredicted RBP7.21□□□□□ -1.25
UPF3B-204ENST00000619445 GEMIN7Q9H840 131 aaKnown RBP7.21□□□□□ -1.25
UPF3B-204ENST00000619445 TOMM7Q9P0U1 55 aa7.21□□□□□ -1.25
UPF3B-204ENST00000619445 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.25
UPF3B-204ENST00000619445 C9orf129Q5T035 196 aaKnown RBP7.2□□□□□ -1.26
UPF3B-204ENST00000619445 LINC00173Q6ZV60 143 aa7.2□□□□□ -1.26
UPF3B-204ENST00000619445 F8VRH5 84 aa7.2□□□□□ -1.26
UPF3B-204ENST00000619445 TP73-AS1Q9UF72 201 aa7.2□□□□□ -1.26
UPF3B-204ENST00000619445 TRAV9-1A0A075B6T8 112 aa7.19□□□□□ -1.26
UPF3B-204ENST00000619445 ZNF861PO60384 105 aa7.19□□□□□ -1.26
UPF3B-204ENST00000619445 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
UPF3B-204ENST00000619445 KRTAP7-1Q8IUC3 87 aa7.19□□□□□ -1.26
UPF3B-204ENST00000619445 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
UPF3B-204ENST00000619445 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
UPF3B-204ENST00000619445 ERASQ7Z444 233 aa7.18□□□□□ -1.26
UPF3B-204ENST00000619445 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
UPF3B-204ENST00000619445 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
UPF3B-204ENST00000619445 C22orf24Q9Y442 160 aa7.17□□□□□ -1.26
UPF3B-204ENST00000619445 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
UPF3B-204ENST00000619445 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
UPF3B-204ENST00000619445 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
UPF3B-204ENST00000619445 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
UPF3B-204ENST00000619445 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
UPF3B-204ENST00000619445 COX19Q49B96 90 aa7.15□□□□□ -1.26
UPF3B-204ENST00000619445 UQCC3Q6UW78 93 aa7.15□□□□□ -1.26
UPF3B-204ENST00000619445 MRPL55Q7Z7F7 128 aaKnown RBP7.15□□□□□ -1.26
UPF3B-204ENST00000619445 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.26
UPF3B-204ENST00000619445 S100PP25815 95 aa7.14□□□□□ -1.27
UPF3B-204ENST00000619445 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
UPF3B-204ENST00000619445 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
UPF3B-204ENST00000619445 BCE1O60756 84 aa7.13□□□□□ -1.27
UPF3B-204ENST00000619445 CLLU1Q5K131 121 aa7.13□□□□□ -1.27
UPF3B-204ENST00000619445 COX7B2Q8TF08 81 aa7.13□□□□□ -1.27
UPF3B-204ENST00000619445 GNB1LQ9BYB4 327 aa7.13□□□□□ -1.27
UPF3B-204ENST00000619445 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
UPF3B-204ENST00000619445 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
UPF3B-204ENST00000619445 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
UPF3B-204ENST00000619445 H3BRM9 83 aa7.12□□□□□ -1.27
UPF3B-204ENST00000619445 CRYGAP11844 174 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 PMVKQ15126 192 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 PRR4Q16378 134 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 KIAA1644Q3SXP7 199 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 NKAPP1Q8N9T2 125 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 SMCO4Q9NRQ5 59 aa7.1□□□□□ -1.27
UPF3B-204ENST00000619445 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
UPF3B-204ENST00000619445 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
UPF3B-204ENST00000619445 ATP5LO75964 103 aa7.09□□□□□ -1.27
UPF3B-204ENST00000619445 FA2HQ7L5A8 372 aa7.09□□□□□ -1.27
UPF3B-204ENST00000619445 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
UPF3B-204ENST00000619445 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
UPF3B-204ENST00000619445 SEC11CQ9BY50 192 aa7.08□□□□□ -1.28
UPF3B-204ENST00000619445 ADCYAP1P18509 176 aa7.08□□□□□ -1.28
UPF3B-204ENST00000619445 A0A0U1RQV1 116 aa7.07□□□□□ -1.28
UPF3B-204ENST00000619445 UBE2AP49459 152 aa7.07□□□□□ -1.28
UPF3B-204ENST00000619445 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
UPF3B-204ENST00000619445 LPAP08519 4548 aa7.06□□□□□ -1.28
UPF3B-204ENST00000619445 SPINK8P0C7L1 97 aa7.06□□□□□ -1.28
UPF3B-204ENST00000619445 CTAG1AP78358 180 aa7.06□□□□□ -1.28
UPF3B-204ENST00000619445 FABP9Q0Z7S8 132 aa7.06□□□□□ -1.28
UPF3B-204ENST00000619445 COX17Q14061 63 aa7.06□□□□□ -1.28
UPF3B-204ENST00000619445 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
UPF3B-204ENST00000619445 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
UPF3B-204ENST00000619445 RPL37AP8A6NKH3 93 aa7.05□□□□□ -1.28
UPF3B-204ENST00000619445 IGLC3P0DOY3 106 aa7.05□□□□□ -1.28
UPF3B-204ENST00000619445 RAB5BP61020 215 aa7.05□□□□□ -1.28
UPF3B-204ENST00000619445 RPL24P83731 157 aaKnown RBP7.05□□□□□ -1.28
UPF3B-204ENST00000619445 RHEBQ15382 184 aa7.05□□□□□ -1.28
UPF3B-204ENST00000619445 IGLV5-39A0A0G2JS06 123 aa7.04□□□□□ -1.28
UPF3B-204ENST00000619445 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
UPF3B-204ENST00000619445 A0A087X002 238 aa7.03□□□□□ -1.28
UPF3B-204ENST00000619445 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
UPF3B-204ENST00000619445 TSPAN13O95857 204 aa7.02□□□□□ -1.29
UPF3B-204ENST00000619445 HBDP02042 147 aa7.01□□□□□ -1.29
UPF3B-204ENST00000619445 PFN2P35080 140 aa7.01□□□□□ -1.29
UPF3B-204ENST00000619445 NDUFA6P56556 154 aa7.01□□□□□ -1.29
UPF3B-204ENST00000619445 ERG28Q9UKR5 140 aa7.01□□□□□ -1.29
UPF3B-204ENST00000619445 IGKV2-28A0A075B6P5 120 aa7□□□□□ -1.29
UPF3B-204ENST00000619445 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
UPF3B-204ENST00000619445 IGKV2D-28P01615 120 aa7□□□□□ -1.29
UPF3B-204ENST00000619445 LINC00614P0C842 121 aa7□□□□□ -1.29
UPF3B-204ENST00000619445 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
UPF3B-204ENST00000619445 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
UPF3B-204ENST00000619445 C10orf91Q5T1B1 145 aa6.99□□□□□ -1.29
UPF3B-204ENST00000619445 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
UPF3B-204ENST00000619445 RPS10P5Q9NQ39 176 aa6.99□□□□□ -1.29
UPF3B-204ENST00000619445 VPREB1P12018 145 aa6.98□□□□□ -1.29
UPF3B-204ENST00000619445 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
UPF3B-204ENST00000619445 COMMD7Q86VX2 200 aa6.98□□□□□ -1.29
UPF3B-204ENST00000619445 C18orf32Q8TCD1 76 aa6.98□□□□□ -1.29
UPF3B-204ENST00000619445 TMEM126AQ9H061 195 aa6.98□□□□□ -1.29
UPF3B-204ENST00000619445 TRAPPC1Q9Y5R8 145 aa6.98□□□□□ -1.29
UPF3B-204ENST00000619445 TMEM170BQ5T4T1 132 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms