RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CDK2AP2O75956 126 aa9.81□□□□□ -0.84
CNOT3-210ENST00000618939 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
CNOT3-210ENST00000618939 A0A087WYN8 130 aa9.8□□□□□ -0.84
CNOT3-210ENST00000618939 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
CNOT3-210ENST00000618939 ENHOQ6UWT2 76 aa9.8□□□□□ -0.84
CNOT3-210ENST00000618939 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
CNOT3-210ENST00000618939 C3orf22Q8N5N4 141 aa9.8□□□□□ -0.84
CNOT3-210ENST00000618939 MUC7Q8TAX7 377 aa9.79□□□□□ -0.84
CNOT3-210ENST00000618939 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
CNOT3-210ENST00000618939 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
CNOT3-210ENST00000618939 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
CNOT3-210ENST00000618939 J3KT08 172 aa9.79□□□□□ -0.84
CNOT3-210ENST00000618939 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.84
CNOT3-210ENST00000618939 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
CNOT3-210ENST00000618939 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
CNOT3-210ENST00000618939 AKAP13Q12802 2813 aa9.76□□□□□ -0.85
CNOT3-210ENST00000618939 C20orf197Q8N268 126 aa9.76□□□□□ -0.85
CNOT3-210ENST00000618939 SHISA2Q6UWI4 295 aa9.75□□□□□ -0.85
CNOT3-210ENST00000618939 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
CNOT3-210ENST00000618939 Q8N814 137 aa9.75□□□□□ -0.85
CNOT3-210ENST00000618939 M0R378 163 aa9.75□□□□□ -0.85
CNOT3-210ENST00000618939 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
CNOT3-210ENST00000618939 SCXQ7RTU7 201 aa9.75□□□□□ -0.85
CNOT3-210ENST00000618939 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
CNOT3-210ENST00000618939 Q6JHZ5 121 aa9.74□□□□□ -0.85
CNOT3-210ENST00000618939 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
CNOT3-210ENST00000618939 A8MTW9 85 aa9.74□□□□□ -0.85
CNOT3-210ENST00000618939 BPY2O14599 106 aa9.74□□□□□ -0.85
CNOT3-210ENST00000618939 A0A096LNT2 108 aa9.73□□□□□ -0.85
CNOT3-210ENST00000618939 LITAFQ99732 161 aa9.73□□□□□ -0.85
CNOT3-210ENST00000618939 SERP2Q8N6R1 65 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 NDUFC2O95298 119 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 CCKP06307 115 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 LINC01561Q8N1V8 128 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 COX7CP15954 63 aa9.72□□□□□ -0.85
CNOT3-210ENST00000618939 RETNQ9HD89 108 aa9.71□□□□□ -0.85
CNOT3-210ENST00000618939 TRAV10A0A0B4J240 114 aa9.71□□□□□ -0.86
CNOT3-210ENST00000618939 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
CNOT3-210ENST00000618939 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
CNOT3-210ENST00000618939 NBEAQ8NFP9 2946 aa9.7□□□□□ -0.86
CNOT3-210ENST00000618939 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
CNOT3-210ENST00000618939 NANOS2P60321 138 aaKnown RBP9.7□□□□□ -0.86
CNOT3-210ENST00000618939 FRYQ5TBA9 3013 aa9.7□□□□□ -0.86
CNOT3-210ENST00000618939 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
CNOT3-210ENST00000618939 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
CNOT3-210ENST00000618939 KLK5Q9Y337 293 aaPredicted RBP9.69□□□□□ -0.86
CNOT3-210ENST00000618939 A0A0J9YWU9 116 aa9.69□□□□□ -0.86
CNOT3-210ENST00000618939 UBE2AP49459 152 aa9.69□□□□□ -0.86
CNOT3-210ENST00000618939 Q6ZTC4 211 aa9.68□□□□□ -0.86
CNOT3-210ENST00000618939 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
CNOT3-210ENST00000618939 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
CNOT3-210ENST00000618939 SPEGQ15772 3267 aa9.67□□□□□ -0.86
CNOT3-210ENST00000618939 REV3LO60673 3130 aa9.67□□□□□ -0.86
CNOT3-210ENST00000618939 A0A087WVE0 104 aa9.67□□□□□ -0.86
CNOT3-210ENST00000618939 TMEM258P61165 79 aa9.67□□□□□ -0.86
CNOT3-210ENST00000618939 FRYLO94915 3013 aa9.67□□□□□ -0.86
CNOT3-210ENST00000618939 FLNAP21333 2647 aaKnown RBP9.67□□□□□ -0.86
CNOT3-210ENST00000618939 FLNBO75369 2602 aaKnown RBP9.66□□□□□ -0.86
CNOT3-210ENST00000618939 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
CNOT3-210ENST00000618939 X6R8D5 127 aa9.66□□□□□ -0.86
CNOT3-210ENST00000618939 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
CNOT3-210ENST00000618939 C3orf84H3BNL1 204 aa9.66□□□□□ -0.86
CNOT3-210ENST00000618939 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
CNOT3-210ENST00000618939 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
CNOT3-210ENST00000618939 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
CNOT3-210ENST00000618939 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
CNOT3-210ENST00000618939 C14orf177Q52M58 125 aa9.64□□□□□ -0.87
CNOT3-210ENST00000618939 WFDC10BQ8IUB3 73 aa9.64□□□□□ -0.87
CNOT3-210ENST00000618939 FAM19A1Q7Z5A9 133 aa9.64□□□□□ -0.87
CNOT3-210ENST00000618939 DHRS4-AS1Q9P1J3 65 aa9.63□□□□□ -0.87
CNOT3-210ENST00000618939 MAP1AP78559 2803 aaPredicted RBP9.63□□□□□ -0.87
CNOT3-210ENST00000618939 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
CNOT3-210ENST00000618939 PRB2P02812 416 aaPredicted RBP9.63□□□□□ -0.87
CNOT3-210ENST00000618939 MP68P56378 58 aa9.63□□□□□ -0.87
CNOT3-210ENST00000618939 LINC00575Q6W349 94 aa9.63□□□□□ -0.87
CNOT3-210ENST00000618939 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
CNOT3-210ENST00000618939 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
CNOT3-210ENST00000618939 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
CNOT3-210ENST00000618939 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.61□□□□□ -0.87
CNOT3-210ENST00000618939 NDUFC2-KCTD14E9PQ53 114 aa9.61□□□□□ -0.87
CNOT3-210ENST00000618939 NDUFB1O75438 58 aa9.61□□□□□ -0.87
CNOT3-210ENST00000618939 EYSQ5T1H1 3165 aa9.59□□□□□ -0.87
CNOT3-210ENST00000618939 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
CNOT3-210ENST00000618939 F8P00451 2351 aa9.59□□□□□ -0.87
CNOT3-210ENST00000618939 SPTBN5Q9NRC6 3674 aaKnown RBP9.58□□□□□ -0.88
CNOT3-210ENST00000618939 NDUFS5O43920 106 aa9.58□□□□□ -0.88
CNOT3-210ENST00000618939 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
CNOT3-210ENST00000618939 CSNK1G2-AS1Q8NCQ2 148 aa9.58□□□□□ -0.88
CNOT3-210ENST00000618939 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
CNOT3-210ENST00000618939 IL17DQ8TAD2 202 aa9.58□□□□□ -0.88
CNOT3-210ENST00000618939 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
CNOT3-210ENST00000618939 LOC107984640A0A0U1RRK4 108 aa9.57□□□□□ -0.88
CNOT3-210ENST00000618939 Q6ZRU5 148 aa9.57□□□□□ -0.88
CNOT3-210ENST00000618939 Q8N3U1 123 aa9.57□□□□□ -0.88
CNOT3-210ENST00000618939 A0A096LNI7 61 aa9.57□□□□□ -0.88
CNOT3-210ENST00000618939 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
CNOT3-210ENST00000618939 SNURFQ9Y675 71 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms