RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 KAAG1Q9UBP8 84 aa8.84□□□□□ -0.99
MATR3-227ENST00000618441 ZANQ9Y493 2812 aa8.84□□□□□ -0.99
MATR3-227ENST00000618441 ANKRD17O75179 2603 aaKnown RBP8.84□□□□□ -0.99
MATR3-227ENST00000618441 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
MATR3-227ENST00000618441 BEAN1Q3B7T3 259 aa8.84□□□□□ -0.99
MATR3-227ENST00000618441 Q8N9W7 124 aa8.84□□□□□ -0.99
MATR3-227ENST00000618441 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
MATR3-227ENST00000618441 OVOL2Q9BRP0 275 aa8.83□□□□□ -1
MATR3-227ENST00000618441 TMEM256-PLSCR3K7ERE1 68 aa8.82□□□□□ -1
MATR3-227ENST00000618441 UBE2L6O14933 153 aa8.82□□□□□ -1
MATR3-227ENST00000618441 MINOS1Q5TGZ0 78 aa8.82□□□□□ -1
MATR3-227ENST00000618441 HRNRQ86YZ3 2850 aaPredicted RBP8.82□□□□□ -1
MATR3-227ENST00000618441 CELSR2Q9HCU4 2923 aa8.82□□□□□ -1
MATR3-227ENST00000618441 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
MATR3-227ENST00000618441 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
MATR3-227ENST00000618441 C19orf84I3L1E1 186 aa8.81□□□□□ -1
MATR3-227ENST00000618441 PSPHP1O15172 72 aa8.8□□□□□ -1
MATR3-227ENST00000618441 H0YGX0 51 aa8.8□□□□□ -1
MATR3-227ENST00000618441 C11orf72Q8NBR9 251 aa8.8□□□□□ -1
MATR3-227ENST00000618441 COX7B2Q8TF08 81 aa8.8□□□□□ -1
MATR3-227ENST00000618441 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
MATR3-227ENST00000618441 CCL19Q99731 98 aa8.79□□□□□ -1
MATR3-227ENST00000618441 PRR4Q16378 134 aa8.79□□□□□ -1
MATR3-227ENST00000618441 PRR3P79522 188 aaKnown RBP8.78□□□□□ -1
MATR3-227ENST00000618441 C16orf95Q9H693 158 aa8.78□□□□□ -1
MATR3-227ENST00000618441 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
MATR3-227ENST00000618441 Q6ZSN1 163 aa8.78□□□□□ -1
MATR3-227ENST00000618441 TM2D3Q9BRN9 247 aa8.78□□□□□ -1
MATR3-227ENST00000618441 MIFP14174 115 aa8.78□□□□□ -1
MATR3-227ENST00000618441 A0A1W2PPR1 153 aa8.77□□□□□ -1.01
MATR3-227ENST00000618441 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
MATR3-227ENST00000618441 CFHR3Q02985 330 aa8.77□□□□□ -1.01
MATR3-227ENST00000618441 Q8N3U1 123 aa8.77□□□□□ -1.01
MATR3-227ENST00000618441 CHCHD7Q9BUK0 85 aa8.76□□□□□ -1.01
MATR3-227ENST00000618441 NANOS2P60321 138 aaKnown RBP8.76□□□□□ -1.01
MATR3-227ENST00000618441 CCL18P55774 89 aa8.75□□□□□ -1.01
MATR3-227ENST00000618441 KLLNB2CW77 178 aa8.75□□□□□ -1.01
MATR3-227ENST00000618441 BRD3OSQ6XYD6 125 aa8.75□□□□□ -1.01
MATR3-227ENST00000618441 IGKV2-28A0A075B6P5 120 aa8.74□□□□□ -1.01
MATR3-227ENST00000618441 IGKV2D-28P01615 120 aa8.74□□□□□ -1.01
MATR3-227ENST00000618441 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
MATR3-227ENST00000618441 JMJD7-PLA2G4BH0Y9G9 81 aa8.74□□□□□ -1.01
MATR3-227ENST00000618441 FUSP35637 526 aaKnown RBP eCLIP8.74□□□□□ -1.011e-7■■■■□ 24.9
MATR3-227ENST00000618441 Q8N9L7 120 aa8.73□□□□□ -1.01
MATR3-227ENST00000618441 TRBV10-1A0A0K0K1A3 114 aa8.73□□□□□ -1.01
MATR3-227ENST00000618441 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
MATR3-227ENST00000618441 NDUFA4O00483 81 aa8.72□□□□□ -1.01
MATR3-227ENST00000618441 NDUFS5O43920 106 aa8.72□□□□□ -1.01
MATR3-227ENST00000618441 A8MTW9 85 aa8.72□□□□□ -1.01
MATR3-227ENST00000618441 LINC01547P58512 204 aaPredicted RBP8.71□□□□□ -1.02
MATR3-227ENST00000618441 TRGV1A0A0A0MS02 117 aa8.7□□□□□ -1.02
MATR3-227ENST00000618441 M0R2N4 97 aa8.7□□□□□ -1.02
MATR3-227ENST00000618441 BBC3Q96PG8 261 aaPredicted RBP8.7□□□□□ -1.02
MATR3-227ENST00000618441 NREPQ16612 68 aa8.7□□□□□ -1.02
MATR3-227ENST00000618441 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
MATR3-227ENST00000618441 CLPSL2Q6UWE3 100 aa8.7□□□□□ -1.02
MATR3-227ENST00000618441 ZNF73O43830 326 aaPredicted RBP8.69□□□□□ -1.02
MATR3-227ENST00000618441 ZFP36P26651 326 aaKnown RBP8.69□□□□□ -1.02
MATR3-227ENST00000618441 ESRGQ1W209 222 aa8.69□□□□□ -1.02
MATR3-227ENST00000618441 DEFB131AP59861 70 aa8.68□□□□□ -1.02
MATR3-227ENST00000618441 ITPR2Q14571 2701 aa8.68□□□□□ -1.02
MATR3-227ENST00000618441 FLNAP21333 2647 aaKnown RBP8.68□□□□□ -1.02
MATR3-227ENST00000618441 TEP1Q99973 2627 aaKnown RBP8.68□□□□□ -1.02
MATR3-227ENST00000618441 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
MATR3-227ENST00000618441 Q6ZVQ6 151 aa8.68□□□□□ -1.02
MATR3-227ENST00000618441 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
MATR3-227ENST00000618441 Q8N6K4 173 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 LINC01356Q8N9X3 169 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 ODF3BA8MYP8 253 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 TEX15Q9BXT5 2789 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 IGLV5-39A0A0G2JS06 123 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 PRYO14603 147 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
MATR3-227ENST00000618441 C6orf99Q4VX62 202 aa8.66□□□□□ -1.02
MATR3-227ENST00000618441 VPS13CQ709C8 3753 aa8.66□□□□□ -1.02
MATR3-227ENST00000618441 MINOS1-NBL1R4GNA1 71 aa8.66□□□□□ -1.02
MATR3-227ENST00000618441 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
MATR3-227ENST00000618441 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
MATR3-227ENST00000618441 BPY2O14599 106 aa8.65□□□□□ -1.03
MATR3-227ENST00000618441 NDUFC1O43677 76 aa8.64□□□□□ -1.03
MATR3-227ENST00000618441 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
MATR3-227ENST00000618441 Q8N814 137 aa8.64□□□□□ -1.03
MATR3-227ENST00000618441 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
MATR3-227ENST00000618441 NF1P21359 2839 aa8.63□□□□□ -1.03
MATR3-227ENST00000618441 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
MATR3-227ENST00000618441 Q6ZRU5 148 aa8.63□□□□□ -1.03
MATR3-227ENST00000618441 ATRQ13535 2644 aa8.62□□□□□ -1.03
MATR3-227ENST00000618441 NTM-AS1Q6ZSK4 140 aa8.62□□□□□ -1.03
MATR3-227ENST00000618441 DYNLRB2Q8TF09 96 aa8.62□□□□□ -1.03
MATR3-227ENST00000618441 A8MUN3 132 aa8.62□□□□□ -1.03
MATR3-227ENST00000618441 H3BUX3 64 aa8.61□□□□□ -1.03
MATR3-227ENST00000618441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.6□□□□□ -1.03
MATR3-227ENST00000618441 FAM30AQ9NZY2 134 aa8.6□□□□□ -1.03
MATR3-227ENST00000618441 K7EQG2 157 aa8.6□□□□□ -1.03
MATR3-227ENST00000618441 C10orf99Q6UWK7 81 aa8.6□□□□□ -1.03
MATR3-227ENST00000618441 OBSCN-AS1Q96MR7 158 aa8.6□□□□□ -1.03
MATR3-227ENST00000618441 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
MATR3-227ENST00000618441 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
MATR3-227ENST00000618441 Q6ZQY7 126 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms