RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 KIF25-AS1Q9Y6Z4 181 aa7.63□□□□□ -1.19
CLTCL1-209ENST00000617103 LINC00337Q8N6G1 96 aa7.63□□□□□ -1.19
CLTCL1-209ENST00000617103 PRO0628Q9UI54 55 aa7.63□□□□□ -1.19
CLTCL1-209ENST00000617103 PIEZO1Q92508 2521 aa7.62□□□□□ -1.19
CLTCL1-209ENST00000617103 TRBV7-6A0A0J9YX20 115 aa7.62□□□□□ -1.19
CLTCL1-209ENST00000617103 LINC01547P58512 204 aaPredicted RBP7.62□□□□□ -1.19
CLTCL1-209ENST00000617103 LINC00575Q6W349 94 aa7.62□□□□□ -1.19
CLTCL1-209ENST00000617103 USP9XQ93008 2570 aaPredicted RBP7.62□□□□□ -1.19
CLTCL1-209ENST00000617103 PSPHP1O15172 72 aa7.62□□□□□ -1.19
CLTCL1-209ENST00000617103 NCOR2Q9Y618 2525 aa7.61□□□□□ -1.19
CLTCL1-209ENST00000617103 NANOS2P60321 138 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-209ENST00000617103 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-209ENST00000617103 TRAV10A0A0B4J240 114 aa7.61□□□□□ -1.19
CLTCL1-209ENST00000617103 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-209ENST00000617103 Q6ZSN1 163 aa7.61□□□□□ -1.19
CLTCL1-209ENST00000617103 TLN2Q9Y4G6 2542 aa7.6□□□□□ -1.19
CLTCL1-209ENST00000617103 ESRGQ1W209 222 aa7.6□□□□□ -1.19
CLTCL1-209ENST00000617103 IL17DQ8TAD2 202 aa7.6□□□□□ -1.19
CLTCL1-209ENST00000617103 FN1P02751 2386 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 CXCL6P80162 114 aa7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 SETD2Q9BYW2 2564 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 AVPP01185 164 aa7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 FHL2Q14192 279 aa7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 SBSPONQ8IVN8 264 aa7.59□□□□□ -1.19
CLTCL1-209ENST00000617103 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
CLTCL1-209ENST00000617103 ZNF462Q96JM2 2506 aa7.58□□□□□ -1.2
CLTCL1-209ENST00000617103 PTPRSQ13332 1948 aa7.58□□□□□ -1.2
CLTCL1-209ENST00000617103 C10orf25Q5T742 122 aa7.58□□□□□ -1.2
CLTCL1-209ENST00000617103 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
CLTCL1-209ENST00000617103 LRP4O75096 1905 aa7.57□□□□□ -1.2
CLTCL1-209ENST00000617103 SRCAPQ6ZRS2 3230 aa7.57□□□□□ -1.2
CLTCL1-209ENST00000617103 CPAMD8Q8IZJ3 1885 aa7.57□□□□□ -1.2
CLTCL1-209ENST00000617103 BCE1O60756 84 aa7.57□□□□□ -1.2
CLTCL1-209ENST00000617103 ABCA12Q86UK0 2595 aa7.57□□□□□ -1.2
CLTCL1-209ENST00000617103 CEP192Q8TEP8 1941 aa7.56□□□□□ -1.2
CLTCL1-209ENST00000617103 PLAC8L1A1L4L8 177 aa7.56□□□□□ -1.2
CLTCL1-209ENST00000617103 IGHV4-30-4P0DP06 118 aa7.56□□□□□ -1.2
CLTCL1-209ENST00000617103 IGLV9-49A0A0B4J1Y8 123 aa7.56□□□□□ -1.2
CLTCL1-209ENST00000617103 LINC00315P59091 139 aa7.56□□□□□ -1.2
CLTCL1-209ENST00000617103 Q8N2B8 174 aa7.56□□□□□ -1.2
CLTCL1-209ENST00000617103 CDSNQ15517 529 aa7.55□□□□□ -1.2
CLTCL1-209ENST00000617103 PKD1L2Q7Z442 2459 aa7.55□□□□□ -1.2
CLTCL1-209ENST00000617103 A8MTW9 85 aa7.54□□□□□ -1.2
CLTCL1-209ENST00000617103 IGLV1-51P01701 117 aa7.54□□□□□ -1.2
CLTCL1-209ENST00000617103 USP9YO00507 2555 aaPredicted RBP7.54□□□□□ -1.2
CLTCL1-209ENST00000617103 RETNQ9HD89 108 aa7.54□□□□□ -1.2
CLTCL1-209ENST00000617103 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
CLTCL1-209ENST00000617103 JMJD1CQ15652 2540 aa7.54□□□□□ -1.2
CLTCL1-209ENST00000617103 H0Y9P7 68 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 REG3GQ6UW15 175 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 TET2Q6N021 2002 aaPredicted RBP7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 INAFM1C9JVW0 142 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 C6orf223Q8N319 242 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 A0A087WSZ3 146 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
CLTCL1-209ENST00000617103 HCG22E2RYF7 251 aa7.52□□□□□ -1.21
CLTCL1-209ENST00000617103 ADAMTS20P59510 1910 aa7.52□□□□□ -1.21
CLTCL1-209ENST00000617103 C4orf26Q17RF5 130 aa7.52□□□□□ -1.21
CLTCL1-209ENST00000617103 PCOTHQ58A44 107 aa7.52□□□□□ -1.21
CLTCL1-209ENST00000617103 IGHV3OR16-9A0A0B4J2B5 98 aa7.52□□□□□ -1.21
CLTCL1-209ENST00000617103 F8WDY8 70 aa7.51□□□□□ -1.21
CLTCL1-209ENST00000617103 COL5A1P20908 1838 aaPredicted RBP7.51□□□□□ -1.21
CLTCL1-209ENST00000617103 C2orf48Q96LS8 159 aa7.51□□□□□ -1.21
CLTCL1-209ENST00000617103 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
CLTCL1-209ENST00000617103 SPATA3Q8NHX4 192 aa7.5□□□□□ -1.21
CLTCL1-209ENST00000617103 FAM218AQ96MZ4 157 aa7.5□□□□□ -1.21
CLTCL1-209ENST00000617103 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
CLTCL1-209ENST00000617103 ZFYVE26Q68DK2 2539 aa7.5□□□□□ -1.21
CLTCL1-209ENST00000617103 FAM19A4Q96LR4 140 aa7.49□□□□□ -1.21
CLTCL1-209ENST00000617103 C11orf72Q8NBR9 251 aa7.49□□□□□ -1.21
CLTCL1-209ENST00000617103 Q9BRP9 147 aa7.49□□□□□ -1.21
CLTCL1-209ENST00000617103 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
CLTCL1-209ENST00000617103 EXPH5Q8NEV8 1989 aa7.48□□□□□ -1.21
CLTCL1-209ENST00000617103 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
CLTCL1-209ENST00000617103 A0A1W2PPR1 153 aa7.47□□□□□ -1.21
CLTCL1-209ENST00000617103 MUC4Q99102 2169 aa7.47□□□□□ -1.21
CLTCL1-209ENST00000617103 SMIM29Q86T20 159 aa7.46□□□□□ -1.21
CLTCL1-209ENST00000617103 C1orf64Q8NEQ6 169 aa7.46□□□□□ -1.22
CLTCL1-209ENST00000617103 RAI1Q7Z5J4 1906 aaPredicted RBP7.45□□□□□ -1.22
CLTCL1-209ENST00000617103 Q6ZRU5 148 aa7.45□□□□□ -1.22
CLTCL1-209ENST00000617103 LY6G6DO95868 133 aa7.45□□□□□ -1.22
CLTCL1-209ENST00000617103 LYPD5Q6UWN5 251 aa7.44□□□□□ -1.22
CLTCL1-209ENST00000617103 A0A1B0GW54 56 aa7.43□□□□□ -1.22
CLTCL1-209ENST00000617103 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
CLTCL1-209ENST00000617103 Q6ZQT0 140 aa7.43□□□□□ -1.22
CLTCL1-209ENST00000617103 Q6ZTC4 211 aa7.43□□□□□ -1.22
CLTCL1-209ENST00000617103 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
CLTCL1-209ENST00000617103 M0R2N4 97 aa7.42□□□□□ -1.22
CLTCL1-209ENST00000617103 LOC110117498A0A087WWA1 95 aa7.42□□□□□ -1.22
CLTCL1-209ENST00000617103 PLA2G2AP14555 144 aa7.42□□□□□ -1.22
CLTCL1-209ENST00000617103 CEP295Q9C0D2 2601 aa7.42□□□□□ -1.22
CLTCL1-209ENST00000617103 Q9UF83 564 aa7.41□□□□□ -1.22
CLTCL1-209ENST00000617103 PTPRBP23467 1997 aa7.41□□□□□ -1.22
CLTCL1-209ENST00000617103 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.22
CLTCL1-209ENST00000617103 LITAFQ99732 161 aa7.4□□□□□ -1.22
CLTCL1-209ENST00000617103 TM2D3Q9BRN9 247 aa7.39□□□□□ -1.23
CLTCL1-209ENST00000617103 C16orf95Q9H693 158 aa7.39□□□□□ -1.23
CLTCL1-209ENST00000617103 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms