RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
PPP4R3B-206ENST00000616407 DIRC1Q969H9 104 aa9.28□□□□□ -0.92
PPP4R3B-206ENST00000616407 SPATA25Q9BR10 227 aa9.27□□□□□ -0.93
PPP4R3B-206ENST00000616407 A0A0J9YWU9 116 aa9.27□□□□□ -0.93
PPP4R3B-206ENST00000616407 F8WEM9 126 aa9.27□□□□□ -0.93
PPP4R3B-206ENST00000616407 C6orf99Q4VX62 202 aa9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 CHD6Q8TD26 2715 aa9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 IGLV5-39A0A0G2JS06 123 aa9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 A0A1B0GUV1 79 aa9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 UNQ6190/PRO20217Q6UXQ8 127 aa9.26□□□□□ -0.93
PPP4R3B-206ENST00000616407 Q6ZTC4 211 aa9.25□□□□□ -0.93
PPP4R3B-206ENST00000616407 JMJD7-PLA2G4BH0Y9G9 81 aa9.25□□□□□ -0.93
PPP4R3B-206ENST00000616407 X6R8D5 127 aa9.25□□□□□ -0.93
PPP4R3B-206ENST00000616407 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
PPP4R3B-206ENST00000616407 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
PPP4R3B-206ENST00000616407 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
PPP4R3B-206ENST00000616407 ETDCA0A1B0GVM5 59 aa9.24□□□□□ -0.93
PPP4R3B-206ENST00000616407 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
PPP4R3B-206ENST00000616407 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
PPP4R3B-206ENST00000616407 UNC79Q9P2D8 2635 aa9.23□□□□□ -0.93
PPP4R3B-206ENST00000616407 IGLV5-45A0A087WSX0 123 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 hADV29S1A0JD25 119 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 UBE2BP63146 152 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 C9orf153Q5TBE3 101 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 TRAV10A0A0B4J240 114 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 COX7BP24311 80 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 KRTAP1-1Q07627 177 aa9.22□□□□□ -0.93
PPP4R3B-206ENST00000616407 LAMA5O15230 3695 aa9.21□□□□□ -0.93
PPP4R3B-206ENST00000616407 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
PPP4R3B-206ENST00000616407 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
PPP4R3B-206ENST00000616407 ITPR1Q14643 2758 aa9.21□□□□□ -0.94
PPP4R3B-206ENST00000616407 GIG44P09565 113 aaPredicted RBP9.21□□□□□ -0.94
PPP4R3B-206ENST00000616407 SYCNQ0VAF6 134 aa9.21□□□□□ -0.94
PPP4R3B-206ENST00000616407 XGP55808 180 aa9.2□□□□□ -0.94
PPP4R3B-206ENST00000616407 COX17Q14061 63 aa9.2□□□□□ -0.94
PPP4R3B-206ENST00000616407 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
PPP4R3B-206ENST00000616407 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
PPP4R3B-206ENST00000616407 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
PPP4R3B-206ENST00000616407 B5MCH6 92 aa9.19□□□□□ -0.94
PPP4R3B-206ENST00000616407 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
PPP4R3B-206ENST00000616407 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
PPP4R3B-206ENST00000616407 C6orf223Q8N319 242 aa9.19□□□□□ -0.94
PPP4R3B-206ENST00000616407 MAST4O15021 2626 aa9.18□□□□□ -0.94
PPP4R3B-206ENST00000616407 MGAM2Q2M2H8 2515 aa9.18□□□□□ -0.94
PPP4R3B-206ENST00000616407 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 KRTAP10-3P60369 221 aa9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 CITED1Q99966 193 aa9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 SBSPONQ8IVN8 264 aa9.17□□□□□ -0.94
PPP4R3B-206ENST00000616407 CR1P17927 2039 aa9.16□□□□□ -0.94
PPP4R3B-206ENST00000616407 SOSTDC1Q6X4U4 206 aa9.16□□□□□ -0.94
PPP4R3B-206ENST00000616407 TEP1Q99973 2627 aaKnown RBP9.16□□□□□ -0.94
PPP4R3B-206ENST00000616407 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
PPP4R3B-206ENST00000616407 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
PPP4R3B-206ENST00000616407 Q6ZQY7 126 aa9.15□□□□□ -0.95
PPP4R3B-206ENST00000616407 Q8N3U1 123 aa9.15□□□□□ -0.95
PPP4R3B-206ENST00000616407 HRNRQ86YZ3 2850 aaPredicted RBP9.15□□□□□ -0.95
PPP4R3B-206ENST00000616407 DCHS1Q96JQ0 3298 aa9.14□□□□□ -0.95
PPP4R3B-206ENST00000616407 LITAFQ99732 161 aa9.14□□□□□ -0.95
PPP4R3B-206ENST00000616407 A0A087WYN8 130 aa9.14□□□□□ -0.95
PPP4R3B-206ENST00000616407 PLAC8L1A1L4L8 177 aa9.14□□□□□ -0.95
PPP4R3B-206ENST00000616407 H3BQ85 93 aa9.14□□□□□ -0.95
PPP4R3B-206ENST00000616407 IL17DQ8TAD2 202 aa9.14□□□□□ -0.95
PPP4R3B-206ENST00000616407 UTP20O75691 2785 aaKnown RBP9.13□□□□□ -0.95
PPP4R3B-206ENST00000616407 KRTAP24-1Q3LI83 254 aa9.13□□□□□ -0.95
PPP4R3B-206ENST00000616407 ZANQ9Y493 2812 aa9.13□□□□□ -0.95
PPP4R3B-206ENST00000616407 RELNP78509 3460 aa9.13□□□□□ -0.95
PPP4R3B-206ENST00000616407 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
PPP4R3B-206ENST00000616407 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
PPP4R3B-206ENST00000616407 NDUFV3P56181 108 aaKnown RBP9.12□□□□□ -0.95
PPP4R3B-206ENST00000616407 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
PPP4R3B-206ENST00000616407 Q8NAQ8 132 aa9.12□□□□□ -0.95
PPP4R3B-206ENST00000616407 KLK5Q9Y337 293 aaPredicted RBP9.12□□□□□ -0.95
PPP4R3B-206ENST00000616407 A0A1B0GX51 115 aa9.12□□□□□ -0.95
PPP4R3B-206ENST00000616407 FUSP35637 526 aaKnown RBP eCLIP9.11□□□□□ -0.955e-9■□□□□ 8.8
PPP4R3B-206ENST00000616407 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
PPP4R3B-206ENST00000616407 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 M0R378 163 aa9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 EIF4EBP3O60516 100 aaPredicted RBP9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 SETXQ7Z333 2677 aaKnown RBP9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 TRBV10-3A0A0K0K1G6 114 aa9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 NREPQ16612 68 aa9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 FAM19A5Q7Z5A7 132 aaPredicted RBP9.1□□□□□ -0.95
PPP4R3B-206ENST00000616407 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
PPP4R3B-206ENST00000616407 PDE6GP18545 87 aa9.09□□□□□ -0.95
PPP4R3B-206ENST00000616407 ZFHX4Q86UP3 3567 aa9.09□□□□□ -0.95
PPP4R3B-206ENST00000616407 ATOX1O00244 68 aa9.08□□□□□ -0.96
PPP4R3B-206ENST00000616407 Q8N814 137 aa9.08□□□□□ -0.96
PPP4R3B-206ENST00000616407 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
PPP4R3B-206ENST00000616407 NDUFC2O95298 119 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms