RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SPANXB1Q9NS25 103 aaPredicted RBP2.34□□□□□ -2.03
LIG4-205ENST00000614526 A0A087WZ39 114 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 RPL24P83731 157 aaKnown RBP2.34□□□□□ -2.03
LIG4-205ENST00000614526 SOSTDC1Q6X4U4 206 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 MIR7-3HGQ8N6C7 128 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 PRO1854Q9UHT4 67 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 DNAH3Q8TD57 4116 aa2.34□□□□□ -2.04
LIG4-205ENST00000614526 K7EP34 96 aa2.34□□□□□ -2.04
LIG4-205ENST00000614526 MIAQ16674 131 aa2.34□□□□□ -2.04
LIG4-205ENST00000614526 ENHOQ6UWT2 76 aa2.34□□□□□ -2.04
LIG4-205ENST00000614526 GTF2H5Q6ZYL4 71 aa2.34□□□□□ -2.04
LIG4-205ENST00000614526 COX7A2LO14548 114 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 CRPP02741 224 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 CKS1BP61024 79 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 HIGD2BQ4VC39 106 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 LINC00308Q8TCZ7 52 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 ERG28Q9UKR5 140 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 TEX48A0A1B0GUV7 120 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 PRR3P79522 188 aaKnown RBP2.33□□□□□ -2.04
LIG4-205ENST00000614526 FAM19A3Q7Z5A8 133 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 IGKV2D-24A0A075B6R9 120 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 A0A1B0GWB2 263 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 WFDC2Q14508 124 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 C10orf25Q5T742 122 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 CFAP161Q6P656 301 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 CD164L2Q6UWJ8 174 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 UNQ6190/PRO20217Q6UXQ8 127 aa2.33□□□□□ -2.04
LIG4-205ENST00000614526 RPL13AP40429 203 aaKnown RBP2.32□□□□□ -2.04
LIG4-205ENST00000614526 RNF151Q2KHN1 245 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 SH2D6Q7Z4S9 175 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 SPANXDQ9BXN6 97 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 SPANXCQ9NY87 97 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 LECT2O14960 151 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 TCL1BO95988 128 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 FOXI1Q12951 378 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 LYSTQ99698 3801 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 DNAH9Q9NYC9 4486 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.32□□□□□ -2.04
LIG4-205ENST00000614526 TRAV10A0A0B4J240 114 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 SPAG11BQ08648 103 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 OR13C6PQ8NH95 151 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 CLEC2BQ92478 149 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 LINC00588Q9Y4M8 146 aa2.32□□□□□ -2.04
LIG4-205ENST00000614526 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 TRIAP1O43715 76 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 CCL18P55774 89 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 HERV-K104P63124 156 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 KIAA0087Q14695 138 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 ETDBQ3ZM63 59 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 SND1-IT1Q9HBX3 110 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 TGP01266 2768 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 A0A0B4J2C4 111 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 TIMM17BO60830 172 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 CASC10Q5T4H9 136 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 Q8IZM0 81 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 C1orf43Q9BWL3 253 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 XAGE1AQ9HD64 81 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 PRR34Q9NV39 138 aa2.31□□□□□ -2.04
LIG4-205ENST00000614526 MEGF8Q7Z7M0 2845 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 C9JAW5 83 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 IFITM1P13164 125 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 LINC00337Q8N6G1 96 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 IGKV2-28A0A075B6P5 120 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 IBA57-AS1B1ANH7 110 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 H3BNG1 76 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 ZNF561-AS1K7EIQ3 104 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 IGKV2D-28P01615 120 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 PRKDCP78527 4128 aaKnown RBP2.3□□□□□ -2.04
LIG4-205ENST00000614526 NCR3O14931 201 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 GAGE2EQ4V326 116 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 CAMK2N2Q96S95 79 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 GAGE2DQ9UEU5 116 aa2.3□□□□□ -2.04
LIG4-205ENST00000614526 SMCPP49901 116 aaPredicted RBP2.29□□□□□ -2.04
LIG4-205ENST00000614526 OCIAD2Q56VL3 154 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 UBE2DNLQ8IWF7 75 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 Q8NDZ9 215 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 LINC01556Q5JQF7 62 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 B9D2Q9BPU9 175 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 TRAV8-4A0A0B4J246 113 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 A0A1B0GV72 72 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 COX6CP09669 75 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 Q6ZRU5 148 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 C15orf53Q8NAA6 179 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 C6orf48Q9UBA6 75 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 DNAH10Q8IVF4 4471 aa2.29□□□□□ -2.04
LIG4-205ENST00000614526 M0R2N4 97 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 KRTAP26-1Q6PEX3 210 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 SMIM11BQ8TCY0 68 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 KLK5Q9Y337 293 aaPredicted RBP2.28□□□□□ -2.04
LIG4-205ENST00000614526 TRBV30A0A0K0K1B3 111 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 F8W1H4 67 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 SLC25A20O43772 301 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 RPL18AQ02543 176 aaKnown RBP2.28□□□□□ -2.04
LIG4-205ENST00000614526 LINC01620Q4KN68 170 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 LYRM7Q5U5X0 104 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 FAM218AQ96MZ4 157 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 VPS25Q9BRG1 176 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms