RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 OXLD1Q5BKU9 147 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 C6orf226Q5I0X4 101 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 SND1-IT1Q9HBX3 110 aa13.62□□□□□ -0.23
SMARCD2-212ENST00000613943 SS18Q15532 418 aa13.61□□□□□ -0.23
SMARCD2-212ENST00000613943 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
SMARCD2-212ENST00000613943 COPS9Q8WXC6 57 aa13.61□□□□□ -0.23
SMARCD2-212ENST00000613943 ANGP03950 147 aaKnown RBP13.6□□□□□ -0.23
SMARCD2-212ENST00000613943 CCL18P55774 89 aa13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 PKD1L1Q8TDX9 2849 aa13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 FBN1P35555 2871 aaKnown RBP13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 M0QXV9 152 aa13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 ATP5G1P05496 136 aa13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 WFDC9Q8NEX5 89 aa13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 FAM218AQ96MZ4 157 aa13.59□□□□□ -0.23
SMARCD2-212ENST00000613943 COX7A2LO14548 114 aa13.58□□□□□ -0.23
SMARCD2-212ENST00000613943 STAB1Q9NY15 2570 aa13.58□□□□□ -0.24
SMARCD2-212ENST00000613943 UBE2WQ96B02 151 aa13.58□□□□□ -0.24
SMARCD2-212ENST00000613943 RETNQ9HD89 108 aa13.58□□□□□ -0.24
SMARCD2-212ENST00000613943 MIFP14174 115 aa13.57□□□□□ -0.24
SMARCD2-212ENST00000613943 CRPP02741 224 aa13.56□□□□□ -0.24
SMARCD2-212ENST00000613943 SPART-AS1P0CW21 52 aa13.56□□□□□ -0.24
SMARCD2-212ENST00000613943 REG3AQ06141 175 aa13.56□□□□□ -0.24
SMARCD2-212ENST00000613943 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
SMARCD2-212ENST00000613943 CHCHD10Q8WYQ3 142 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-212ENST00000613943 TRAV8-4A0A0B4J246 113 aa13.54□□□□□ -0.24
SMARCD2-212ENST00000613943 H3BT86 120 aa13.54□□□□□ -0.24
SMARCD2-212ENST00000613943 KRTAP10-11P60412 298 aa13.53□□□□□ -0.24
SMARCD2-212ENST00000613943 TRAV13-2A0A0B4J235 113 aa13.52□□□□□ -0.25
SMARCD2-212ENST00000613943 C9orf116Q5BN46 136 aaPredicted RBP13.52□□□□□ -0.25
SMARCD2-212ENST00000613943 LINC01600Q96MT4 127 aa13.52□□□□□ -0.25
SMARCD2-212ENST00000613943 Q9HAA7 133 aa13.52□□□□□ -0.25
SMARCD2-212ENST00000613943 SMIM11BQ8TCY0 68 aa13.51□□□□□ -0.25
SMARCD2-212ENST00000613943 PRR3P79522 188 aaKnown RBP13.51□□□□□ -0.25
SMARCD2-212ENST00000613943 Q8IZM0 81 aa13.51□□□□□ -0.25
SMARCD2-212ENST00000613943 LINC00526Q96FQ7 95 aa13.51□□□□□ -0.25
SMARCD2-212ENST00000613943 CKS1BP61024 79 aa13.5□□□□□ -0.25
SMARCD2-212ENST00000613943 CD164L2Q6UWJ8 174 aa13.5□□□□□ -0.25
SMARCD2-212ENST00000613943 CMYA5Q8N3K9 4069 aa13.49□□□□□ -0.25
SMARCD2-212ENST00000613943 MALP21145 153 aa13.49□□□□□ -0.25
SMARCD2-212ENST00000613943 KIAA0087Q14695 138 aa13.49□□□□□ -0.25
SMARCD2-212ENST00000613943 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
SMARCD2-212ENST00000613943 OR13C6PQ8NH95 151 aa13.49□□□□□ -0.25
SMARCD2-212ENST00000613943 TENM3Q9P273 2699 aa13.49□□□□□ -0.25
SMARCD2-212ENST00000613943 MAST4O15021 2626 aa13.48□□□□□ -0.25
SMARCD2-212ENST00000613943 WIPF1O43516 503 aa13.48□□□□□ -0.25
SMARCD2-212ENST00000613943 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
SMARCD2-212ENST00000613943 KRTAP24-1Q3LI83 254 aa13.47□□□□□ -0.25
SMARCD2-212ENST00000613943 KLK12Q9UKR0 248 aa13.47□□□□□ -0.25
SMARCD2-212ENST00000613943 A0A087WYN8 130 aa13.47□□□□□ -0.25
SMARCD2-212ENST00000613943 C6orf223Q8N319 242 aa13.47□□□□□ -0.25
SMARCD2-212ENST00000613943 PPDPFQ9H3Y8 114 aa13.47□□□□□ -0.25
SMARCD2-212ENST00000613943 SCGB1A1P11684 91 aa13.46□□□□□ -0.26
SMARCD2-212ENST00000613943 LELP1Q5T871 98 aa13.45□□□□□ -0.26
SMARCD2-212ENST00000613943 CFAP161Q6P656 301 aa13.45□□□□□ -0.26
SMARCD2-212ENST00000613943 BAALC-AS2P0C853 105 aa13.44□□□□□ -0.26
SMARCD2-212ENST00000613943 C22orf24Q9Y442 160 aa13.44□□□□□ -0.26
SMARCD2-212ENST00000613943 C10orf25Q5T742 122 aa13.43□□□□□ -0.26
SMARCD2-212ENST00000613943 NOTCH1P46531 2555 aa13.43□□□□□ -0.26
SMARCD2-212ENST00000613943 TRACP01848 142 aa13.42□□□□□ -0.26
SMARCD2-212ENST00000613943 LYPD5Q6UWN5 251 aa13.41□□□□□ -0.26
SMARCD2-212ENST00000613943 Q6ZTC4 211 aa13.41□□□□□ -0.26
SMARCD2-212ENST00000613943 Q8NDZ9 215 aa13.41□□□□□ -0.26
SMARCD2-212ENST00000613943 ENHOQ6UWT2 76 aa13.4□□□□□ -0.26
SMARCD2-212ENST00000613943 TTC32Q5I0X7 151 aa13.4□□□□□ -0.26
SMARCD2-212ENST00000613943 UNQ6190/PRO20217Q6UXQ8 127 aa13.4□□□□□ -0.26
SMARCD2-212ENST00000613943 WFDC10BQ8IUB3 73 aa13.39□□□□□ -0.27
SMARCD2-212ENST00000613943 LINC01561Q8N1V8 128 aa13.39□□□□□ -0.27
SMARCD2-212ENST00000613943 SPAG11BQ08648 103 aa13.38□□□□□ -0.27
SMARCD2-212ENST00000613943 C9orf129Q5T035 196 aaKnown RBP13.38□□□□□ -0.27
SMARCD2-212ENST00000613943 C15orf53Q8NAA6 179 aa13.38□□□□□ -0.27
SMARCD2-212ENST00000613943 LECT2O14960 151 aa13.37□□□□□ -0.27
SMARCD2-212ENST00000613943 SLPIP03973 132 aa13.37□□□□□ -0.27
SMARCD2-212ENST00000613943 KPRPQ5T749 579 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-212ENST00000613943 C3orf56Q8N813 242 aa13.37□□□□□ -0.27
SMARCD2-212ENST00000613943 DEFB121Q5J5C9 76 aa13.36□□□□□ -0.27
SMARCD2-212ENST00000613943 A0A1B0GV72 72 aa13.36□□□□□ -0.27
SMARCD2-212ENST00000613943 NCR3O14931 201 aa13.36□□□□□ -0.27
SMARCD2-212ENST00000613943 PRR34Q9NV39 138 aa13.36□□□□□ -0.27
SMARCD2-212ENST00000613943 SNCGO76070 127 aa13.35□□□□□ -0.27
SMARCD2-212ENST00000613943 DNAL4O96015 105 aa13.35□□□□□ -0.27
SMARCD2-212ENST00000613943 NANOS2P60321 138 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-212ENST00000613943 CYSRT1A8MQ03 144 aa13.34□□□□□ -0.27
SMARCD2-212ENST00000613943 CXCL5P42830 114 aa13.34□□□□□ -0.27
SMARCD2-212ENST00000613943 A0A0J9YWU9 116 aa13.33□□□□□ -0.28
SMARCD2-212ENST00000613943 COL6A5A8TX70 2615 aa13.33□□□□□ -0.28
SMARCD2-212ENST00000613943 PRB2P02812 416 aaPredicted RBP13.33□□□□□ -0.28
SMARCD2-212ENST00000613943 COX17Q14061 63 aa13.31□□□□□ -0.28
SMARCD2-212ENST00000613943 EGFEM1PQ0D2K5 195 aa13.3□□□□□ -0.28
SMARCD2-212ENST00000613943 KLK5Q9Y337 293 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-212ENST00000613943 H0YGX0 51 aa13.3□□□□□ -0.28
SMARCD2-212ENST00000613943 HIGD2BQ4VC39 106 aa13.29□□□□□ -0.28
SMARCD2-212ENST00000613943 SMCR5Q8TEV8 140 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 DNAH3Q8TD57 4116 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 FAM240AA0A1B0GVK7 77 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 ESRGQ1W209 222 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
SMARCD2-212ENST00000613943 C14orf132Q9NPU4 83 aa13.27□□□□□ -0.29
SMARCD2-212ENST00000613943 NBEAL1Q6ZS30 2694 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms