RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ORAOV1Q8WV07 137 aa7.57□□□□□ -1.2
SLIRP-212ENST00000613856 TSTD3H0UI37 97 aa7.56□□□□□ -1.2
SLIRP-212ENST00000613856 SLC25A34Q6PIV7 304 aa7.56□□□□□ -1.2
SLIRP-212ENST00000613856 SFTA2Q6UW10 78 aa7.56□□□□□ -1.2
SLIRP-212ENST00000613856 C15orf56Q8N910 161 aa7.56□□□□□ -1.2
SLIRP-212ENST00000613856 UQCR10Q9UDW1 63 aa7.56□□□□□ -1.2
SLIRP-212ENST00000613856 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 C16orf90A8MZG2 172 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 NDUFA1O15239 70 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 CXCL5P42830 114 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 TNP2Q05952 138 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 Q6ZRN7 208 aaPredicted RBP7.55□□□□□ -1.2
SLIRP-212ENST00000613856 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 PRO1933Q9H354 126 aa7.55□□□□□ -1.2
SLIRP-212ENST00000613856 GVQW2A0A096LPI5 108 aaPredicted RBP7.54□□□□□ -1.2
SLIRP-212ENST00000613856 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 CDK2AP2O75956 126 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 PRSS2P07478 247 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 SPAG11BQ08648 103 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 Q8N1X5 172 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 ZNF625Q96I27 306 aaPredicted RBP7.54□□□□□ -1.2
SLIRP-212ENST00000613856 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 TOMM7Q9P0U1 55 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 NDUFA12Q9UI09 145 aa7.54□□□□□ -1.2
SLIRP-212ENST00000613856 C6orf223Q8N319 242 aa7.53□□□□□ -1.2
SLIRP-212ENST00000613856 MIEN1Q9BRT3 115 aa7.53□□□□□ -1.2
SLIRP-212ENST00000613856 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 F8WDY8 70 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 PSCAO43653 123 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 HERV-K104P63124 156 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
SLIRP-212ENST00000613856 NTN5Q8WTR8 489 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-212ENST00000613856 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
SLIRP-212ENST00000613856 DNAH5Q8TE73 4624 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 CKS1BP61024 79 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 HIGD2BQ4VC39 106 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 C1orf134Q5TEV5 83 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 C2orf91Q6ZV80 131 aa7.5□□□□□ -1.21
SLIRP-212ENST00000613856 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
SLIRP-212ENST00000613856 TIMM17BO60830 172 aa7.49□□□□□ -1.21
SLIRP-212ENST00000613856 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
SLIRP-212ENST00000613856 C14orf177Q52M58 125 aa7.49□□□□□ -1.21
SLIRP-212ENST00000613856 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
SLIRP-212ENST00000613856 DDTP30046 118 aa7.48□□□□□ -1.21
SLIRP-212ENST00000613856 WFDC2Q14508 124 aa7.48□□□□□ -1.21
SLIRP-212ENST00000613856 C2orf82Q6UX34 121 aa7.48□□□□□ -1.21
SLIRP-212ENST00000613856 DMBT1Q9UGM3 2413 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-212ENST00000613856 TRBV30A0A0K0K1B3 111 aa7.47□□□□□ -1.21
SLIRP-212ENST00000613856 LINC00587B1AMM8 73 aa7.47□□□□□ -1.21
SLIRP-212ENST00000613856 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
SLIRP-212ENST00000613856 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
SLIRP-212ENST00000613856 CAMK2N2Q96S95 79 aa7.47□□□□□ -1.21
SLIRP-212ENST00000613856 SPANXB1Q9NS25 103 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-212ENST00000613856 LECT2O14960 151 aa7.46□□□□□ -1.22
SLIRP-212ENST00000613856 UNQ6190/PRO20217Q6UXQ8 127 aa7.46□□□□□ -1.22
SLIRP-212ENST00000613856 LITAFQ99732 161 aa7.46□□□□□ -1.22
SLIRP-212ENST00000613856 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
SLIRP-212ENST00000613856 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 CIRBPQ14011 172 aaKnown RBP7.45□□□□□ -1.22
SLIRP-212ENST00000613856 COX17Q14061 63 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 TAL2Q16559 108 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 C10orf25Q5T742 122 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 Q6ZRU5 148 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 Q6ZVH6 145 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 CARD19Q96LW7 228 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 SPANXCQ9NY87 97 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
SLIRP-212ENST00000613856 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
SLIRP-212ENST00000613856 A0A087WTM6 91 aa7.44□□□□□ -1.22
SLIRP-212ENST00000613856 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
SLIRP-212ENST00000613856 HSD52Q0P140 79 aa7.44□□□□□ -1.22
SLIRP-212ENST00000613856 SLPIP03973 132 aa7.43□□□□□ -1.22
SLIRP-212ENST00000613856 SMIM13P0DJ93 91 aa7.43□□□□□ -1.22
SLIRP-212ENST00000613856 Q8N814 137 aa7.43□□□□□ -1.22
SLIRP-212ENST00000613856 PPDPFQ9H3Y8 114 aa7.43□□□□□ -1.22
SLIRP-212ENST00000613856 FAT1Q14517 4588 aa7.43□□□□□ -1.22
SLIRP-212ENST00000613856 PCP4L1A6NKN8 68 aa7.42□□□□□ -1.22
SLIRP-212ENST00000613856 FUSP35637 526 aaKnown RBP eCLIP7.42□□□□□ -1.22
SLIRP-212ENST00000613856 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
SLIRP-212ENST00000613856 CTAG1AP78358 180 aa7.42□□□□□ -1.22
SLIRP-212ENST00000613856 ADAMTSL4-AS1Q5T5F5 129 aa7.42□□□□□ -1.22
SLIRP-212ENST00000613856 FLG2Q5D862 2391 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-212ENST00000613856 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-212ENST00000613856 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
SLIRP-212ENST00000613856 IFITM1P13164 125 aa7.41□□□□□ -1.22
SLIRP-212ENST00000613856 GCSHP23434 173 aa7.41□□□□□ -1.22
SLIRP-212ENST00000613856 LINC00158P58513 81 aa7.41□□□□□ -1.22
SLIRP-212ENST00000613856 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-212ENST00000613856 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
SLIRP-212ENST00000613856 INAFM2P0DMQ5 153 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms