RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 S100A6P06703 90 aa8.5□□□□□ -1.05
MDC1-209ENST00000613547 XGP55808 180 aa8.5□□□□□ -1.05
MDC1-209ENST00000613547 C2orf82Q6UX34 121 aa8.5□□□□□ -1.05
MDC1-209ENST00000613547 DNAH5Q8TE73 4624 aa8.5□□□□□ -1.05
MDC1-209ENST00000613547 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 IGKV2-24A0A0C4DH68 120 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 DPM2O94777 84 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
MDC1-209ENST00000613547 C10orf25Q5T742 122 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 SCXQ7RTU7 201 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
MDC1-209ENST00000613547 A0A096LNI7 61 aa8.48□□□□□ -1.05
MDC1-209ENST00000613547 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
MDC1-209ENST00000613547 HAMPP81172 84 aa8.48□□□□□ -1.05
MDC1-209ENST00000613547 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
MDC1-209ENST00000613547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
MDC1-209ENST00000613547 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 S100A2P29034 98 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 MAJINQ3KP22 176 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 SFTA2Q6UW10 78 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
MDC1-209ENST00000613547 IGKCP01834 107 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 PTTG1IPP53801 180 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 HERVK_113P61574 105 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 PET117Q6UWS5 81 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 PMCHL2Q9BQD1 86 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 KIAA1109Q2LD37 5005 aa8.46□□□□□ -1.06
MDC1-209ENST00000613547 NDUFC2-KCTD14E9PQ53 114 aa8.45□□□□□ -1.06
MDC1-209ENST00000613547 PANO1I0J062 215 aa8.45□□□□□ -1.06
MDC1-209ENST00000613547 KRTDAPP60985 99 aa8.45□□□□□ -1.06
MDC1-209ENST00000613547 A0A087WYN8 130 aa8.44□□□□□ -1.06
MDC1-209ENST00000613547 C20orf202A1L168 122 aa8.44□□□□□ -1.06
MDC1-209ENST00000613547 Q8N1X5 172 aa8.44□□□□□ -1.06
MDC1-209ENST00000613547 STPG4Q8N801 248 aa8.44□□□□□ -1.06
MDC1-209ENST00000613547 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
MDC1-209ENST00000613547 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
MDC1-209ENST00000613547 C3orf79P0CE67 100 aa8.43□□□□□ -1.06
MDC1-209ENST00000613547 C9orf116Q5BN46 136 aaPredicted RBP8.43□□□□□ -1.06
MDC1-209ENST00000613547 LINC01545Q5VT33 79 aa8.43□□□□□ -1.06
MDC1-209ENST00000613547 Q6ZRP5 223 aa8.43□□□□□ -1.06
MDC1-209ENST00000613547 HIST3H2BBQ8N257 126 aa8.43□□□□□ -1.06
MDC1-209ENST00000613547 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
MDC1-209ENST00000613547 AKR1D1P51857 326 aa8.42□□□□□ -1.06
MDC1-209ENST00000613547 GAGE2EQ4V326 116 aa8.42□□□□□ -1.06
MDC1-209ENST00000613547 GAGE2DQ9UEU5 116 aa8.42□□□□□ -1.06
MDC1-209ENST00000613547 PLEKHB2Q96CS7 222 aa8.41□□□□□ -1.06
MDC1-209ENST00000613547 EPM2AB3EWF7 344 aa8.4□□□□□ -1.06
MDC1-209ENST00000613547 LEPROTO15243 131 aa8.4□□□□□ -1.06
MDC1-209ENST00000613547 LINC00528Q8N1L1 170 aa8.4□□□□□ -1.06
MDC1-209ENST00000613547 HIST1H2BLQ99880 126 aa8.4□□□□□ -1.06
MDC1-209ENST00000613547 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
MDC1-209ENST00000613547 RYR1P21817 5038 aa8.39□□□□□ -1.07
MDC1-209ENST00000613547 SNRPEP62304 92 aaKnown RBP8.39□□□□□ -1.07
MDC1-209ENST00000613547 HERV-K104P63124 156 aa8.39□□□□□ -1.07
MDC1-209ENST00000613547 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
MDC1-209ENST00000613547 ZNF625Q96I27 306 aaPredicted RBP8.39□□□□□ -1.07
MDC1-209ENST00000613547 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
MDC1-209ENST00000613547 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
MDC1-209ENST00000613547 PFN2P35080 140 aa8.38□□□□□ -1.07
MDC1-209ENST00000613547 COX17Q14061 63 aa8.38□□□□□ -1.07
MDC1-209ENST00000613547 Q5VSD8 79 aa8.38□□□□□ -1.07
MDC1-209ENST00000613547 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
MDC1-209ENST00000613547 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
MDC1-209ENST00000613547 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
MDC1-209ENST00000613547 C5orf52A6NGY3 159 aa8.37□□□□□ -1.07
MDC1-209ENST00000613547 LINC00587B1AMM8 73 aa8.37□□□□□ -1.07
MDC1-209ENST00000613547 J3QQQ9 107 aa8.37□□□□□ -1.07
MDC1-209ENST00000613547 NMUP48645 174 aa8.37□□□□□ -1.07
MDC1-209ENST00000613547 HERC2O95714 4834 aa8.37□□□□□ -1.07
MDC1-209ENST00000613547 E9PLD3 99 aa8.36□□□□□ -1.07
MDC1-209ENST00000613547 MEIG1Q5JSS6 88 aa8.36□□□□□ -1.07
MDC1-209ENST00000613547 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
MDC1-209ENST00000613547 HSPG2P98160 4391 aa8.36□□□□□ -1.07
MDC1-209ENST00000613547 A0A1W2PNN7 141 aa8.35□□□□□ -1.07
MDC1-209ENST00000613547 LINC00158P58513 81 aa8.35□□□□□ -1.07
MDC1-209ENST00000613547 C9orf129Q5T035 196 aaKnown RBP8.35□□□□□ -1.07
MDC1-209ENST00000613547 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
MDC1-209ENST00000613547 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
MDC1-209ENST00000613547 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.07
MDC1-209ENST00000613547 RPL37AP61513 92 aaKnown RBP8.34□□□□□ -1.07
MDC1-209ENST00000613547 FAM168BA1KXE4 195 aa8.33□□□□□ -1.08
MDC1-209ENST00000613547 M0QXV9 152 aa8.32□□□□□ -1.08
MDC1-209ENST00000613547 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
MDC1-209ENST00000613547 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
MDC1-209ENST00000613547 ATOH7Q8N100 152 aa8.31□□□□□ -1.08
MDC1-209ENST00000613547 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
MDC1-209ENST00000613547 SND1-IT1Q9HBX3 110 aa8.31□□□□□ -1.08
MDC1-209ENST00000613547 LBHQ53QV2 105 aaPredicted RBP8.3□□□□□ -1.08
MDC1-209ENST00000613547 PHF5AQ7RTV0 110 aaKnown RBP8.3□□□□□ -1.08
MDC1-209ENST00000613547 HSBP1L1C9JCN9 74 aa8.29□□□□□ -1.08
MDC1-209ENST00000613547 SCGB1D1O95968 90 aa8.29□□□□□ -1.08
MDC1-209ENST00000613547 UBE2BP63146 152 aa8.29□□□□□ -1.08
MDC1-209ENST00000613547 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
MDC1-209ENST00000613547 SERTAD4-AS1Q5TG53 156 aa8.29□□□□□ -1.08
MDC1-209ENST00000613547 NKAPP1Q8N9T2 125 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms