RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 A0A087WYN8 130 aa9.76□□□□□ -0.85
GGA3-220ENST00000613421 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
GGA3-220ENST00000613421 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
GGA3-220ENST00000613421 EGFEM1PQ0D2K5 195 aa9.76□□□□□ -0.85
GGA3-220ENST00000613421 Q6JHZ5 121 aa9.75□□□□□ -0.85
GGA3-220ENST00000613421 Q8N814 137 aa9.75□□□□□ -0.85
GGA3-220ENST00000613421 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
GGA3-220ENST00000613421 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
GGA3-220ENST00000613421 POLQO75417 2590 aa9.74□□□□□ -0.85
GGA3-220ENST00000613421 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 TRBV10-3A0A0K0K1G6 114 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 FAM236DA0A1B0GTK5 79 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 FAM236CP0DP71 79 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 NTM-AS1Q6ZSK4 140 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 MTORP42345 2549 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
GGA3-220ENST00000613421 Q6ZTC4 211 aa9.72□□□□□ -0.85
GGA3-220ENST00000613421 BPTFQ12830 3046 aa9.72□□□□□ -0.85
GGA3-220ENST00000613421 M0QXV9 152 aa9.72□□□□□ -0.85
GGA3-220ENST00000613421 COX7CP15954 63 aa9.72□□□□□ -0.85
GGA3-220ENST00000613421 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
GGA3-220ENST00000613421 PKD1L2Q7Z442 2459 aa9.71□□□□□ -0.85
GGA3-220ENST00000613421 ANKRD17O75179 2603 aaKnown RBP9.71□□□□□ -0.86
GGA3-220ENST00000613421 HTTP42858 3142 aa9.71□□□□□ -0.86
GGA3-220ENST00000613421 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
GGA3-220ENST00000613421 NDUFC2O95298 119 aa9.7□□□□□ -0.86
GGA3-220ENST00000613421 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
GGA3-220ENST00000613421 FHL3Q13643 280 aa9.69□□□□□ -0.86
GGA3-220ENST00000613421 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
GGA3-220ENST00000613421 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
GGA3-220ENST00000613421 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
GGA3-220ENST00000613421 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
GGA3-220ENST00000613421 PPDPFQ9H3Y8 114 aa9.67□□□□□ -0.86
GGA3-220ENST00000613421 Q9UF83 564 aa9.66□□□□□ -0.86
GGA3-220ENST00000613421 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
GGA3-220ENST00000613421 BRK1Q8WUW1 75 aa9.66□□□□□ -0.86
GGA3-220ENST00000613421 IGLV5-45A0A087WSX0 123 aa9.66□□□□□ -0.86
GGA3-220ENST00000613421 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
GGA3-220ENST00000613421 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.86
GGA3-220ENST00000613421 NDUFC2-KCTD14E9PQ53 114 aa9.65□□□□□ -0.86
GGA3-220ENST00000613421 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.87
GGA3-220ENST00000613421 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
GGA3-220ENST00000613421 IGKV4-1P06312 121 aa9.64□□□□□ -0.87
GGA3-220ENST00000613421 NDUFC1O43677 76 aa9.63□□□□□ -0.87
GGA3-220ENST00000613421 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
GGA3-220ENST00000613421 A0A087WVE0 104 aa9.63□□□□□ -0.87
GGA3-220ENST00000613421 FSHBP01225 129 aa9.63□□□□□ -0.87
GGA3-220ENST00000613421 M0R2N4 97 aa9.63□□□□□ -0.87
GGA3-220ENST00000613421 C2orf48Q96LS8 159 aa9.63□□□□□ -0.87
GGA3-220ENST00000613421 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
GGA3-220ENST00000613421 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
GGA3-220ENST00000613421 F8WDY8 70 aa9.61□□□□□ -0.87
GGA3-220ENST00000613421 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
GGA3-220ENST00000613421 PLAC8L1A1L4L8 177 aa9.61□□□□□ -0.87
GGA3-220ENST00000613421 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
GGA3-220ENST00000613421 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
GGA3-220ENST00000613421 ACANP16112 2415 aa9.6□□□□□ -0.87
GGA3-220ENST00000613421 ATP5EP56381 51 aaPredicted RBP9.6□□□□□ -0.87
GGA3-220ENST00000613421 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
GGA3-220ENST00000613421 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
GGA3-220ENST00000613421 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
GGA3-220ENST00000613421 MUC4Q99102 2169 aa9.59□□□□□ -0.87
GGA3-220ENST00000613421 LRCOL1A6NCL2 159 aa9.58□□□□□ -0.88
GGA3-220ENST00000613421 A8MTW9 85 aa9.58□□□□□ -0.88
GGA3-220ENST00000613421 Q6ZRU5 148 aa9.58□□□□□ -0.88
GGA3-220ENST00000613421 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
GGA3-220ENST00000613421 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
GGA3-220ENST00000613421 SOSTDC1Q6X4U4 206 aa9.57□□□□□ -0.88
GGA3-220ENST00000613421 LINC00846Q9NV44 126 aa9.57□□□□□ -0.88
GGA3-220ENST00000613421 TRAV7A0A075B6U4 112 aa9.57□□□□□ -0.88
GGA3-220ENST00000613421 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
GGA3-220ENST00000613421 X6R8D5 127 aa9.57□□□□□ -0.88
GGA3-220ENST00000613421 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
GGA3-220ENST00000613421 IGLV9-49A0A0B4J1Y8 123 aa9.54□□□□□ -0.88
GGA3-220ENST00000613421 FAM30AQ9NZY2 134 aa9.54□□□□□ -0.88
GGA3-220ENST00000613421 TRBV7-7A0A0K0K1E9 115 aa9.53□□□□□ -0.88
GGA3-220ENST00000613421 NUPR2A6NF83 97 aa9.53□□□□□ -0.88
GGA3-220ENST00000613421 PRYO14603 147 aa9.53□□□□□ -0.88
GGA3-220ENST00000613421 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
GGA3-220ENST00000613421 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
GGA3-220ENST00000613421 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
GGA3-220ENST00000613421 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
GGA3-220ENST00000613421 RANBP2P49792 3224 aaKnown RBP9.52□□□□□ -0.89
GGA3-220ENST00000613421 Q8N3U1 123 aa9.52□□□□□ -0.89
GGA3-220ENST00000613421 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.89
GGA3-220ENST00000613421 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
GGA3-220ENST00000613421 Q6ZVQ6 151 aa9.52□□□□□ -0.89
GGA3-220ENST00000613421 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
GGA3-220ENST00000613421 EPG5Q9HCE0 2579 aa9.51□□□□□ -0.89
GGA3-220ENST00000613421 LITAFQ99732 161 aa9.51□□□□□ -0.89
GGA3-220ENST00000613421 LY6G6CO95867 125 aa9.5□□□□□ -0.89
GGA3-220ENST00000613421 LINC01556Q5JQF7 62 aa9.49□□□□□ -0.89
GGA3-220ENST00000613421 V9GYY9 64 aa9.49□□□□□ -0.89
GGA3-220ENST00000613421 TRANK1O15050 2925 aa9.49□□□□□ -0.89
GGA3-220ENST00000613421 ESRGQ1W209 222 aa9.48□□□□□ -0.89
GGA3-220ENST00000613421 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
GGA3-220ENST00000613421 PRR4Q16378 134 aa9.48□□□□□ -0.89
GGA3-220ENST00000613421 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
GGA3-220ENST00000613421 A0A096LNT2 108 aa9.47□□□□□ -0.89
GGA3-220ENST00000613421 H3BNG1 76 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms