RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PPP1R2P9O14990 202 aa5.68□□□□□ -1.5
SSX3-204ENST00000612497 GATCO43716 136 aaKnown RBP5.68□□□□□ -1.5
SSX3-204ENST00000612497 Q8NBF4 154 aa5.68□□□□□ -1.5
SSX3-204ENST00000612497 OCC1Q8TAD7 63 aa5.68□□□□□ -1.5
SSX3-204ENST00000612497 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
SSX3-204ENST00000612497 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
SSX3-204ENST00000612497 CT83Q5H943 113 aa5.67□□□□□ -1.5
SSX3-204ENST00000612497 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
SSX3-204ENST00000612497 BATF3Q9NR55 127 aa5.67□□□□□ -1.5
SSX3-204ENST00000612497 USH2AO75445 5202 aa5.67□□□□□ -1.5
SSX3-204ENST00000612497 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
SSX3-204ENST00000612497 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 A6NJY4 79 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 SPINK1P00995 79 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 LINC01561Q8N1V8 128 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 NKAPP1Q8N9T2 125 aa5.66□□□□□ -1.5
SSX3-204ENST00000612497 ALKBH7Q9BT30 221 aaPredicted RBP5.66□□□□□ -1.5
SSX3-204ENST00000612497 Q6ZN92 141 aa5.65□□□□□ -1.5
SSX3-204ENST00000612497 SYNE2Q8WXH0 6885 aaKnown RBP5.65□□□□□ -1.51
SSX3-204ENST00000612497 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
SSX3-204ENST00000612497 HIGD1CA8MV81 97 aa5.64□□□□□ -1.51
SSX3-204ENST00000612497 F8VRH5 84 aa5.64□□□□□ -1.51
SSX3-204ENST00000612497 SCO1O75880 301 aa5.64□□□□□ -1.51
SSX3-204ENST00000612497 IFI27P40305 119 aaPredicted RBP5.64□□□□□ -1.51
SSX3-204ENST00000612497 CBLN2Q8IUK8 224 aa5.64□□□□□ -1.51
SSX3-204ENST00000612497 Q8IZM0 81 aa5.64□□□□□ -1.51
SSX3-204ENST00000612497 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 RGS21Q2M5E4 152 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 FAM231DQ6ZW35 169 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 FAM19A2Q8N3H0 131 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 C20orf78Q9BR46 151 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 GNB1LQ9BYB4 327 aa5.63□□□□□ -1.51
SSX3-204ENST00000612497 TMEM238C9JI98 176 aa5.62□□□□□ -1.51
SSX3-204ENST00000612497 TMEM250H0YL14 139 aa5.62□□□□□ -1.51
SSX3-204ENST00000612497 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
SSX3-204ENST00000612497 TMEM141Q96I45 108 aa5.62□□□□□ -1.51
SSX3-204ENST00000612497 TMEM126AQ9H061 195 aa5.62□□□□□ -1.51
SSX3-204ENST00000612497 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
SSX3-204ENST00000612497 IGLV4-3A0A075B6K6 122 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 RIGQ13278 110 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 MRPL51Q4U2R6 128 aaKnown RBP5.61□□□□□ -1.51
SSX3-204ENST00000612497 TEX43Q6ZNM6 134 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 Q8N377 158 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 SPRR4Q96PI1 79 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 C2orf88Q9BSF0 95 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
SSX3-204ENST00000612497 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
SSX3-204ENST00000612497 TRBV24-1A0A075B6N3 115 aa5.6□□□□□ -1.51
SSX3-204ENST00000612497 CKS2P33552 79 aa5.6□□□□□ -1.51
SSX3-204ENST00000612497 A0A1B0GW15 77 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 SMLR1H3BR10 107 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 M0R378 163 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 SLC25A20O43772 301 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 RAB5BP61020 215 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 EIF5A2Q9GZV4 153 aaKnown RBP5.59□□□□□ -1.51
SSX3-204ENST00000612497 PYGO1Q9Y3Y4 419 aa5.59□□□□□ -1.51
SSX3-204ENST00000612497 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
SSX3-204ENST00000612497 S100A8P05109 93 aa5.58□□□□□ -1.52
SSX3-204ENST00000612497 RAB5AP20339 215 aa5.58□□□□□ -1.52
SSX3-204ENST00000612497 CXCL5P42830 114 aa5.58□□□□□ -1.52
SSX3-204ENST00000612497 FAM104BQ5XKR9 115 aa5.58□□□□□ -1.52
SSX3-204ENST00000612497 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
SSX3-204ENST00000612497 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
SSX3-204ENST00000612497 SLC51BQ86UW2 128 aa5.56□□□□□ -1.52
SSX3-204ENST00000612497 VCX2Q9H322 139 aa5.56□□□□□ -1.52
SSX3-204ENST00000612497 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
SSX3-204ENST00000612497 D6R8Y8 96 aa5.55□□□□□ -1.52
SSX3-204ENST00000612497 NPYP01303 97 aa5.55□□□□□ -1.52
SSX3-204ENST00000612497 BLOC1S1P78537 153 aa5.55□□□□□ -1.52
SSX3-204ENST00000612497 F8W036 122 aa5.54□□□□□ -1.52
SSX3-204ENST00000612497 PPBPP02775 128 aa5.54□□□□□ -1.52
SSX3-204ENST00000612497 CEBPGP53567 150 aa5.54□□□□□ -1.52
SSX3-204ENST00000612497 HERVK_113P63121 156 aa5.54□□□□□ -1.52
SSX3-204ENST00000612497 AMELXQ99217 191 aa5.54□□□□□ -1.52
SSX3-204ENST00000612497 GEMIN7Q9H840 131 aaKnown RBP5.54□□□□□ -1.52
SSX3-204ENST00000612497 OSTCQ9NRP0 149 aa5.54□□□□□ -1.52
SSX3-204ENST00000612497 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 NPSP0C0P6 89 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 CFC1P0CG37 223 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 VPREB1P12018 145 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 SEC11AP67812 179 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 MOBPQ13875 183 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 C2orf66Q6UXQ4 117 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 LINC01551Q86U37 167 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 NAT8BQ9UHF3 227 aa5.53□□□□□ -1.52
SSX3-204ENST00000612497 IGLV9-49A0A0B4J1Y8 123 aa5.52□□□□□ -1.53
SSX3-204ENST00000612497 FAM74A3Q4VXF1 159 aa5.52□□□□□ -1.53
SSX3-204ENST00000612497 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
SSX3-204ENST00000612497 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
SSX3-204ENST00000612497 SMIM7Q9BQ49 75 aa5.52□□□□□ -1.53
SSX3-204ENST00000612497 G0S2P27469 103 aa5.51□□□□□ -1.53
SSX3-204ENST00000612497 RPL24P83731 157 aaKnown RBP5.51□□□□□ -1.53
SSX3-204ENST00000612497 PAPPA-AS1Q5QFB9 102 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms