RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
PCDHGA3-202ENST00000612467 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
PCDHGA3-202ENST00000612467 LINC00269Q8N2A0 174 aa9.73□□□□□ -0.85
PCDHGA3-202ENST00000612467 A0A087WZ39 114 aa9.72□□□□□ -0.85
PCDHGA3-202ENST00000612467 HERV-K104P63124 156 aa9.72□□□□□ -0.85
PCDHGA3-202ENST00000612467 BAHCC1Q9P281 2608 aa9.72□□□□□ -0.85
PCDHGA3-202ENST00000612467 CCDC179H3BU77 68 aa9.72□□□□□ -0.85
PCDHGA3-202ENST00000612467 TENM3Q9P273 2699 aa9.72□□□□□ -0.85
PCDHGA3-202ENST00000612467 UBE2WQ96B02 151 aa9.71□□□□□ -0.85
PCDHGA3-202ENST00000612467 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.85
PCDHGA3-202ENST00000612467 CCL18P55774 89 aa9.71□□□□□ -0.86
PCDHGA3-202ENST00000612467 DAD1P61803 113 aa9.7□□□□□ -0.86
PCDHGA3-202ENST00000612467 FBN1P35555 2871 aaKnown RBP9.7□□□□□ -0.86
PCDHGA3-202ENST00000612467 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
PCDHGA3-202ENST00000612467 CITED1Q99966 193 aa9.7□□□□□ -0.86
PCDHGA3-202ENST00000612467 Q9HAA7 133 aa9.7□□□□□ -0.86
PCDHGA3-202ENST00000612467 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 COX7A2LO14548 114 aa9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 ANGP03950 147 aaKnown RBP9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 IGHV4-30-4P0DP06 118 aa9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 Q8NAQ8 132 aa9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 RETNQ9HD89 108 aa9.69□□□□□ -0.86
PCDHGA3-202ENST00000612467 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
PCDHGA3-202ENST00000612467 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
PCDHGA3-202ENST00000612467 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA3-202ENST00000612467 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
PCDHGA3-202ENST00000612467 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
PCDHGA3-202ENST00000612467 MAST4O15021 2626 aa9.67□□□□□ -0.86
PCDHGA3-202ENST00000612467 SS18Q15532 418 aa9.67□□□□□ -0.86
PCDHGA3-202ENST00000612467 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
PCDHGA3-202ENST00000612467 CRPP02741 224 aa9.67□□□□□ -0.86
PCDHGA3-202ENST00000612467 M0QXV9 152 aa9.66□□□□□ -0.86
PCDHGA3-202ENST00000612467 C3orf56Q8N813 242 aa9.66□□□□□ -0.86
PCDHGA3-202ENST00000612467 APOC4P55056 127 aa9.66□□□□□ -0.86
PCDHGA3-202ENST00000612467 SMIM11BQ8TCY0 68 aa9.66□□□□□ -0.86
PCDHGA3-202ENST00000612467 H3BT86 120 aa9.65□□□□□ -0.86
PCDHGA3-202ENST00000612467 ATP5G1P05496 136 aa9.65□□□□□ -0.86
PCDHGA3-202ENST00000612467 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
PCDHGA3-202ENST00000612467 NDUFV3P56181 108 aaKnown RBP9.65□□□□□ -0.86
PCDHGA3-202ENST00000612467 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA3-202ENST00000612467 A0A087WYN8 130 aa9.64□□□□□ -0.87
PCDHGA3-202ENST00000612467 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
PCDHGA3-202ENST00000612467 REG3AQ06141 175 aa9.64□□□□□ -0.87
PCDHGA3-202ENST00000612467 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
PCDHGA3-202ENST00000612467 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
PCDHGA3-202ENST00000612467 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
PCDHGA3-202ENST00000612467 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
PCDHGA3-202ENST00000612467 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
PCDHGA3-202ENST00000612467 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 LINC01600Q96MT4 127 aa9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 CMYA5Q8N3K9 4069 aa9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 BAALC-AS2P0C853 105 aa9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
PCDHGA3-202ENST00000612467 TRAV13-2A0A0B4J235 113 aa9.61□□□□□ -0.87
PCDHGA3-202ENST00000612467 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
PCDHGA3-202ENST00000612467 KRTAP10-11P60412 298 aa9.61□□□□□ -0.87
PCDHGA3-202ENST00000612467 Q8NDZ9 215 aa9.61□□□□□ -0.87
PCDHGA3-202ENST00000612467 SLPIP03973 132 aa9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 C15orf53Q8NAA6 179 aa9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 MALP21145 153 aa9.6□□□□□ -0.87
PCDHGA3-202ENST00000612467 SNCGO76070 127 aa9.59□□□□□ -0.87
PCDHGA3-202ENST00000612467 MIFP14174 115 aa9.59□□□□□ -0.87
PCDHGA3-202ENST00000612467 Q8IZM0 81 aa9.59□□□□□ -0.87
PCDHGA3-202ENST00000612467 CD164L2Q6UWJ8 174 aa9.59□□□□□ -0.87
PCDHGA3-202ENST00000612467 WFDC9Q8NEX5 89 aa9.59□□□□□ -0.87
PCDHGA3-202ENST00000612467 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
PCDHGA3-202ENST00000612467 LECT2O14960 151 aa9.56□□□□□ -0.88
PCDHGA3-202ENST00000612467 TRACP01848 142 aa9.56□□□□□ -0.88
PCDHGA3-202ENST00000612467 MRPL23Q16540 153 aaKnown RBP9.56□□□□□ -0.88
PCDHGA3-202ENST00000612467 COL6A5A8TX70 2615 aa9.56□□□□□ -0.88
PCDHGA3-202ENST00000612467 NCR3O14931 201 aa9.55□□□□□ -0.88
PCDHGA3-202ENST00000612467 NANOS2P60321 138 aaKnown RBP9.54□□□□□ -0.88
PCDHGA3-202ENST00000612467 DEFB121Q5J5C9 76 aa9.54□□□□□ -0.88
PCDHGA3-202ENST00000612467 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
PCDHGA3-202ENST00000612467 WFDC10BQ8IUB3 73 aa9.54□□□□□ -0.88
PCDHGA3-202ENST00000612467 KRTAP24-1Q3LI83 254 aa9.54□□□□□ -0.88
PCDHGA3-202ENST00000612467 SMCR5Q8TEV8 140 aa9.54□□□□□ -0.88
PCDHGA3-202ENST00000612467 LELP1Q5T871 98 aa9.53□□□□□ -0.88
PCDHGA3-202ENST00000612467 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
PCDHGA3-202ENST00000612467 Q6ZTC4 211 aa9.53□□□□□ -0.88
PCDHGA3-202ENST00000612467 NBEAL1Q6ZS30 2694 aa9.52□□□□□ -0.88
PCDHGA3-202ENST00000612467 SPAG11BQ08648 103 aa9.52□□□□□ -0.89
PCDHGA3-202ENST00000612467 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA3-202ENST00000612467 PPDPFQ9H3Y8 114 aa9.52□□□□□ -0.89
PCDHGA3-202ENST00000612467 DNAL4O96015 105 aa9.51□□□□□ -0.89
PCDHGA3-202ENST00000612467 C14orf132Q9NPU4 83 aa9.51□□□□□ -0.89
PCDHGA3-202ENST00000612467 CYSRT1A8MQ03 144 aa9.5□□□□□ -0.89
PCDHGA3-202ENST00000612467 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
PCDHGA3-202ENST00000612467 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
PCDHGA3-202ENST00000612467 HIGD2BQ4VC39 106 aa9.49□□□□□ -0.89
PCDHGA3-202ENST00000612467 WIPF1O43516 503 aa9.48□□□□□ -0.89
PCDHGA3-202ENST00000612467 XAGE1AQ9HD64 81 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms