RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 A0A1B0GX51 115 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 HECTD1Q9ULT8 2610 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 DEFB121Q5J5C9 76 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 Q8IZM0 81 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 LINC00337Q8N6G1 96 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
LIG4-204ENST00000611712 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
LIG4-204ENST00000611712 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
LIG4-204ENST00000611712 ATOX1O00244 68 aa6.11□□□□□ -1.43
LIG4-204ENST00000611712 MIFP14174 115 aa6.11□□□□□ -1.43
LIG4-204ENST00000611712 HIGD2BQ4VC39 106 aa6.11□□□□□ -1.43
LIG4-204ENST00000611712 A0A087WYN8 130 aa6.1□□□□□ -1.43
LIG4-204ENST00000611712 PRR3P79522 188 aaKnown RBP6.1□□□□□ -1.43
LIG4-204ENST00000611712 Q6Q795 121 aa6.1□□□□□ -1.43
LIG4-204ENST00000611712 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
LIG4-204ENST00000611712 HRNRQ86YZ3 2850 aaPredicted RBP6.1□□□□□ -1.43
LIG4-204ENST00000611712 RBM3P98179 157 aaKnown RBP6.1□□□□□ -1.43
LIG4-204ENST00000611712 C9orf116Q5BN46 136 aaPredicted RBP6.1□□□□□ -1.43
LIG4-204ENST00000611712 SHISA2Q6UWI4 295 aa6.09□□□□□ -1.43
LIG4-204ENST00000611712 DIRC1Q969H9 104 aa6.09□□□□□ -1.43
LIG4-204ENST00000611712 IMUPQ9GZP8 106 aa6.09□□□□□ -1.43
LIG4-204ENST00000611712 hADV29S1A0JD25 119 aa6.09□□□□□ -1.44
LIG4-204ENST00000611712 USP24Q9UPU5 2620 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 TEX15Q9BXT5 2789 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 A0A1B0GUV1 79 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 DPH3Q96FX2 82 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 CHD6Q8TD26 2715 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 RELNP78509 3460 aa6.08□□□□□ -1.44
LIG4-204ENST00000611712 LELP1Q5T871 98 aa6.07□□□□□ -1.44
LIG4-204ENST00000611712 FAM218AQ96MZ4 157 aa6.07□□□□□ -1.44
LIG4-204ENST00000611712 CITED1Q99966 193 aa6.07□□□□□ -1.44
LIG4-204ENST00000611712 ASH1LQ9NR48 2969 aaKnown RBP6.07□□□□□ -1.44
LIG4-204ENST00000611712 DEFB105AQ8NG35 78 aa6.07□□□□□ -1.44
LIG4-204ENST00000611712 CYSRT1A8MQ03 144 aa6.06□□□□□ -1.44
LIG4-204ENST00000611712 COX17Q14061 63 aa6.06□□□□□ -1.44
LIG4-204ENST00000611712 ITPR1Q14643 2758 aa6.06□□□□□ -1.44
LIG4-204ENST00000611712 UQCRQO14949 82 aa6.06□□□□□ -1.44
LIG4-204ENST00000611712 GIG44P09565 113 aaPredicted RBP6.06□□□□□ -1.44
LIG4-204ENST00000611712 IGHV4-30-4P0DP06 118 aa6.06□□□□□ -1.44
LIG4-204ENST00000611712 COX7BP24311 80 aa6.05□□□□□ -1.44
LIG4-204ENST00000611712 MRAPQ8TCY5 172 aa6.05□□□□□ -1.44
LIG4-204ENST00000611712 FAM104AQ969W3 186 aa6.05□□□□□ -1.44
LIG4-204ENST00000611712 TRAV23DV6A0A075B6W5 121 aa6.05□□□□□ -1.44
LIG4-204ENST00000611712 Q6ZQY7 126 aa6.04□□□□□ -1.44
LIG4-204ENST00000611712 IL17DQ8TAD2 202 aa6.04□□□□□ -1.44
LIG4-204ENST00000611712 KPRPQ5T749 579 aaPredicted RBP6.04□□□□□ -1.44
LIG4-204ENST00000611712 C3orf22Q8N5N4 141 aa6.04□□□□□ -1.44
LIG4-204ENST00000611712 PSCAO43653 123 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 C6orf223Q8N319 242 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 Q8N814 137 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 CSNK1G2-AS1Q8NCQ2 148 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 X6R8D5 127 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 IGKV2-28A0A075B6P5 120 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 IGKV2D-28P01615 120 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 FLNBO75369 2602 aaKnown RBP6.03□□□□□ -1.44
LIG4-204ENST00000611712 PLAC8L1A1L4L8 177 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 OXLD1Q5BKU9 147 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 ENHOQ6UWT2 76 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 UBE2DNLQ8IWF7 75 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 KRTAP1-3Q8IUG1 177 aa6.03□□□□□ -1.44
LIG4-204ENST00000611712 H3BQ85 93 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 FAM19A3Q7Z5A8 133 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 C19orf73Q9NVV2 129 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 ATRQ13535 2644 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 DEFB131BA0A096LNP1 70 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 C11orf45Q8TAV5 145 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 SMG1Q96Q15 3661 aaKnown RBP6.02□□□□□ -1.45
LIG4-204ENST00000611712 UPK3BQ9BT76 320 aa6.02□□□□□ -1.45
LIG4-204ENST00000611712 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 F8WEM9 126 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 PDE6GP18545 87 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 Q8N3U1 123 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 RMI2Q96E14 147 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 CELA1Q9UNI1 258 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 KLK5Q9Y337 293 aaPredicted RBP6.01□□□□□ -1.45
LIG4-204ENST00000611712 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 USP17L23D6RBM5 183 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 A0A087WVE0 104 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 NDUFC2O95298 119 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 CCKP06307 115 aa6.01□□□□□ -1.45
LIG4-204ENST00000611712 DCHS2Q6V1P9 2916 aa6□□□□□ -1.45
LIG4-204ENST00000611712 Q6JHZ5 121 aa6□□□□□ -1.45
LIG4-204ENST00000611712 RETNQ9HD89 108 aa6□□□□□ -1.45
LIG4-204ENST00000611712 LINC01561Q8N1V8 128 aa6□□□□□ -1.45
LIG4-204ENST00000611712 WFDC9Q8NEX5 89 aa6□□□□□ -1.45
LIG4-204ENST00000611712 HELZ2Q9BYK8 2649 aaKnown RBP6□□□□□ -1.45
LIG4-204ENST00000611712 COX7CP15954 63 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 TRBV10-3A0A0K0K1G6 114 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 NREPQ16612 68 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
LIG4-204ENST00000611712 UBE2BP63146 152 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 MUC7Q8TAX7 377 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 F8P00451 2351 aa5.99□□□□□ -1.45
LIG4-204ENST00000611712 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 274.9 ms