RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 RPL24P83731 157 aaKnown RBP12.92□□□□□ -0.34
TUBB4B-202ENST00000604929 VAMP3Q15836 100 aa12.92□□□□□ -0.34
TUBB4B-202ENST00000604929 CSMD3Q7Z407 3707 aa12.92□□□□□ -0.34
TUBB4B-202ENST00000604929 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
TUBB4B-202ENST00000604929 A0A1B0GWB2 263 aa12.91□□□□□ -0.34
TUBB4B-202ENST00000604929 KRTAP21-3Q3LHN1 58 aa12.91□□□□□ -0.34
TUBB4B-202ENST00000604929 Q8IZM0 81 aa12.91□□□□□ -0.34
TUBB4B-202ENST00000604929 LINC01561Q8N1V8 128 aa12.91□□□□□ -0.34
TUBB4B-202ENST00000604929 DNAH10OSP0CZ25 163 aa12.89□□□□□ -0.35
TUBB4B-202ENST00000604929 KIAA0087Q14695 138 aa12.89□□□□□ -0.35
TUBB4B-202ENST00000604929 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
TUBB4B-202ENST00000604929 PFN2P35080 140 aa12.89□□□□□ -0.35
TUBB4B-202ENST00000604929 CKS1BP61024 79 aa12.89□□□□□ -0.35
TUBB4B-202ENST00000604929 LINC00158P58513 81 aa12.88□□□□□ -0.35
TUBB4B-202ENST00000604929 CFAP161Q6P656 301 aa12.88□□□□□ -0.35
TUBB4B-202ENST00000604929 Q9HAA7 133 aa12.88□□□□□ -0.35
TUBB4B-202ENST00000604929 LINC00308Q8TCZ7 52 aa12.87□□□□□ -0.35
TUBB4B-202ENST00000604929 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
TUBB4B-202ENST00000604929 C6orf223Q8N319 242 aa12.86□□□□□ -0.35
TUBB4B-202ENST00000604929 PGPEP1Q9NXJ5 209 aa12.86□□□□□ -0.35
TUBB4B-202ENST00000604929 IGKV2D-24A0A075B6R9 120 aa12.86□□□□□ -0.35
TUBB4B-202ENST00000604929 KRTAP26-1Q6PEX3 210 aa12.85□□□□□ -0.35
TUBB4B-202ENST00000604929 SOSTDC1Q6X4U4 206 aa12.85□□□□□ -0.35
TUBB4B-202ENST00000604929 MIR7-3HGQ8N6C7 128 aa12.85□□□□□ -0.35
TUBB4B-202ENST00000604929 C1orf43Q9BWL3 253 aa12.85□□□□□ -0.35
TUBB4B-202ENST00000604929 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
TUBB4B-202ENST00000604929 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
TUBB4B-202ENST00000604929 IFITM1P13164 125 aa12.84□□□□□ -0.35
TUBB4B-202ENST00000604929 SFTA2Q6UW10 78 aa12.84□□□□□ -0.35
TUBB4B-202ENST00000604929 APLNQ9ULZ1 77 aa12.84□□□□□ -0.35
TUBB4B-202ENST00000604929 SPAG11BQ08648 103 aa12.84□□□□□ -0.35
TUBB4B-202ENST00000604929 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
TUBB4B-202ENST00000604929 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
TUBB4B-202ENST00000604929 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
TUBB4B-202ENST00000604929 IBA57-AS1B1ANH7 110 aa12.83□□□□□ -0.36
TUBB4B-202ENST00000604929 H7C2G1 150 aa12.83□□□□□ -0.36
TUBB4B-202ENST00000604929 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
TUBB4B-202ENST00000604929 TSPAN13O95857 204 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 C10orf25Q5T742 122 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 UNQ6190/PRO20217Q6UXQ8 127 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 UPK3BQ9BT76 320 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 FABP2P12104 132 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 UBE2V1Q13404 147 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 HIGD2BQ4VC39 106 aa12.81□□□□□ -0.36
TUBB4B-202ENST00000604929 DNAH7Q8WXX0 4024 aa12.8□□□□□ -0.36
TUBB4B-202ENST00000604929 PLECQ15149 4684 aaKnown RBP12.8□□□□□ -0.36
TUBB4B-202ENST00000604929 DYNC2H1Q8NCM8 4307 aaKnown RBP12.8□□□□□ -0.36
TUBB4B-202ENST00000604929 A0A0B4J2C4 111 aa12.79□□□□□ -0.36
TUBB4B-202ENST00000604929 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
TUBB4B-202ENST00000604929 CXCL5P42830 114 aa12.79□□□□□ -0.36
TUBB4B-202ENST00000604929 UBE2DNLQ8IWF7 75 aa12.79□□□□□ -0.36
TUBB4B-202ENST00000604929 SPCS1Q9Y6A9 102 aa12.78□□□□□ -0.36
TUBB4B-202ENST00000604929 COPS9Q8WXC6 57 aa12.77□□□□□ -0.37
TUBB4B-202ENST00000604929 LOC107984156A0A0G2JMH3 177 aa12.76□□□□□ -0.37
TUBB4B-202ENST00000604929 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
TUBB4B-202ENST00000604929 ZNF561-AS1K7EIQ3 104 aa12.76□□□□□ -0.37
TUBB4B-202ENST00000604929 ARL17AQ8IVW1 177 aa12.76□□□□□ -0.37
TUBB4B-202ENST00000604929 NTN5Q8WTR8 489 aaPredicted RBP12.76□□□□□ -0.37
TUBB4B-202ENST00000604929 DNAH1Q9P2D7 4330 aa12.76□□□□□ -0.37
TUBB4B-202ENST00000604929 Q1RN00 199 aa12.75□□□□□ -0.37
TUBB4B-202ENST00000604929 C15orf56Q8N910 161 aa12.75□□□□□ -0.37
TUBB4B-202ENST00000604929 STARD9Q9P2P6 4700 aa12.74□□□□□ -0.37
TUBB4B-202ENST00000604929 FBN3Q75N90 2809 aa12.74□□□□□ -0.37
TUBB4B-202ENST00000604929 SND1-IT1Q9HBX3 110 aa12.74□□□□□ -0.37
TUBB4B-202ENST00000604929 K7EP34 96 aa12.73□□□□□ -0.37
TUBB4B-202ENST00000604929 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
TUBB4B-202ENST00000604929 GTF2H5Q6ZYL4 71 aa12.73□□□□□ -0.37
TUBB4B-202ENST00000604929 PSMB2P49721 201 aa12.72□□□□□ -0.37
TUBB4B-202ENST00000604929 KRTAP1-5Q9BYS1 174 aa12.72□□□□□ -0.37
TUBB4B-202ENST00000604929 COX17Q14061 63 aa12.71□□□□□ -0.37
TUBB4B-202ENST00000604929 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.37
TUBB4B-202ENST00000604929 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.38
TUBB4B-202ENST00000604929 RPL13AP40429 203 aaKnown RBP12.71□□□□□ -0.38
TUBB4B-202ENST00000604929 C6orf48Q9UBA6 75 aa12.71□□□□□ -0.38
TUBB4B-202ENST00000604929 TGP01266 2768 aa12.69□□□□□ -0.38
TUBB4B-202ENST00000604929 IGKV2-28A0A075B6P5 120 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 H3BMG7 143 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 LECT2O14960 151 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 IGKV2D-28P01615 120 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 Q6ZRU5 148 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 PRR3P79522 188 aaKnown RBP12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 RMI2Q96E14 147 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 PPDPFQ9H3Y8 114 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 DNAH10Q8IVF4 4471 aa12.67□□□□□ -0.38
TUBB4B-202ENST00000604929 LINC00337Q8N6G1 96 aa12.66□□□□□ -0.38
TUBB4B-202ENST00000604929 GVQW2A0A096LPI5 108 aaPredicted RBP12.65□□□□□ -0.38
TUBB4B-202ENST00000604929 USP17L23D6RBM5 183 aa12.65□□□□□ -0.38
TUBB4B-202ENST00000604929 TRIAP1O43715 76 aa12.65□□□□□ -0.38
TUBB4B-202ENST00000604929 C2orf48Q96LS8 159 aa12.64□□□□□ -0.39
TUBB4B-202ENST00000604929 TCL1BO95988 128 aa12.63□□□□□ -0.39
TUBB4B-202ENST00000604929 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
TUBB4B-202ENST00000604929 TRAV13-2A0A0B4J235 113 aa12.62□□□□□ -0.39
TUBB4B-202ENST00000604929 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
TUBB4B-202ENST00000604929 XAGE1AQ9HD64 81 aa12.62□□□□□ -0.39
TUBB4B-202ENST00000604929 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
TUBB4B-202ENST00000604929 SLPIP03973 132 aa12.61□□□□□ -0.39
TUBB4B-202ENST00000604929 Q8NDZ9 215 aa12.61□□□□□ -0.39
TUBB4B-202ENST00000604929 OR13C6PQ8NH95 151 aa12.61□□□□□ -0.39
TUBB4B-202ENST00000604929 LYRM7Q5U5X0 104 aa12.6□□□□□ -0.39
TUBB4B-202ENST00000604929 PSCAO43653 123 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms