RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
CCDC12-208ENST00000603885 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
CCDC12-208ENST00000603885 RHEBQ15382 184 aa11.11□□□□□ -0.63
CCDC12-208ENST00000603885 C10orf91Q5T1B1 145 aa11.11□□□□□ -0.63
CCDC12-208ENST00000603885 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
CCDC12-208ENST00000603885 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
CCDC12-208ENST00000603885 M0QXV9 152 aa11.1□□□□□ -0.63
CCDC12-208ENST00000603885 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
CCDC12-208ENST00000603885 MRPL18Q9H0U6 180 aaKnown RBP11.1□□□□□ -0.63
CCDC12-208ENST00000603885 CARHSP1Q9Y2V2 147 aaKnown RBP11.1□□□□□ -0.63
CCDC12-208ENST00000603885 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
CCDC12-208ENST00000603885 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
CCDC12-208ENST00000603885 FA2HQ7L5A8 372 aa11.09□□□□□ -0.63
CCDC12-208ENST00000603885 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
CCDC12-208ENST00000603885 LINC00469Q8N7U9 141 aa11.09□□□□□ -0.63
CCDC12-208ENST00000603885 SMCO4Q9NRQ5 59 aa11.09□□□□□ -0.63
CCDC12-208ENST00000603885 IGLV7-43P04211 117 aa11.08□□□□□ -0.64
CCDC12-208ENST00000603885 TINCRA0A1B0GVN0 87 aa11.07□□□□□ -0.64
CCDC12-208ENST00000603885 F8VRH5 84 aa11.07□□□□□ -0.64
CCDC12-208ENST00000603885 UBE2BP63146 152 aa11.07□□□□□ -0.64
CCDC12-208ENST00000603885 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
CCDC12-208ENST00000603885 CXCL5P42830 114 aa11.06□□□□□ -0.64
CCDC12-208ENST00000603885 DIRC1Q969H9 104 aa11.06□□□□□ -0.64
CCDC12-208ENST00000603885 UBR4Q5T4S7 5183 aa11.06□□□□□ -0.64
CCDC12-208ENST00000603885 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
CCDC12-208ENST00000603885 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
CCDC12-208ENST00000603885 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
CCDC12-208ENST00000603885 ODF1Q14990 250 aa11.04□□□□□ -0.64
CCDC12-208ENST00000603885 PMVKQ15126 192 aa11.04□□□□□ -0.64
CCDC12-208ENST00000603885 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
CCDC12-208ENST00000603885 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
CCDC12-208ENST00000603885 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
CCDC12-208ENST00000603885 H0Y9J4 135 aa11.01□□□□□ -0.65
CCDC12-208ENST00000603885 TRAPPC1Q9Y5R8 145 aa11.01□□□□□ -0.65
CCDC12-208ENST00000603885 APOC3P02656 99 aa11□□□□□ -0.65
CCDC12-208ENST00000603885 H3BRM9 83 aa10.99□□□□□ -0.65
CCDC12-208ENST00000603885 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
CCDC12-208ENST00000603885 NDUFA5Q16718 116 aa10.99□□□□□ -0.65
CCDC12-208ENST00000603885 LBHQ53QV2 105 aaPredicted RBP10.99□□□□□ -0.65
CCDC12-208ENST00000603885 C18orf32Q8TCD1 76 aa10.99□□□□□ -0.65
CCDC12-208ENST00000603885 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
CCDC12-208ENST00000603885 SNAPINO95295 136 aa10.98□□□□□ -0.65
CCDC12-208ENST00000603885 LINC00614P0C842 121 aa10.97□□□□□ -0.65
CCDC12-208ENST00000603885 SVBPQ8N300 66 aa10.97□□□□□ -0.65
CCDC12-208ENST00000603885 A0A096LNJ9 63 aa10.96□□□□□ -0.65
CCDC12-208ENST00000603885 HBDP02042 147 aa10.96□□□□□ -0.65
CCDC12-208ENST00000603885 NDUFA6P56556 154 aa10.96□□□□□ -0.65
CCDC12-208ENST00000603885 URB1-AS1Q96HZ7 61 aa10.96□□□□□ -0.65
CCDC12-208ENST00000603885 TP73-AS1Q9UF72 201 aa10.96□□□□□ -0.65
CCDC12-208ENST00000603885 NUPR1O60356 82 aa10.95□□□□□ -0.66
CCDC12-208ENST00000603885 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
CCDC12-208ENST00000603885 PRR26Q8N8Z3 221 aa10.95□□□□□ -0.66
CCDC12-208ENST00000603885 RAB5BP61020 215 aa10.94□□□□□ -0.66
CCDC12-208ENST00000603885 MRPL55Q7Z7F7 128 aaKnown RBP10.94□□□□□ -0.66
CCDC12-208ENST00000603885 LRP2P98164 4655 aa10.93□□□□□ -0.66
CCDC12-208ENST00000603885 ATP5LO75964 103 aa10.93□□□□□ -0.66
CCDC12-208ENST00000603885 PMCHL1Q16048 86 aa10.93□□□□□ -0.66
CCDC12-208ENST00000603885 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
CCDC12-208ENST00000603885 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
CCDC12-208ENST00000603885 ZNF861PO60384 105 aa10.91□□□□□ -0.66
CCDC12-208ENST00000603885 ZNF22P17026 224 aaPredicted RBP10.91□□□□□ -0.66
CCDC12-208ENST00000603885 KRTAP1-4P0C5Y4 121 aa10.9□□□□□ -0.66
CCDC12-208ENST00000603885 BAGE3Q86Y29 109 aa10.89□□□□□ -0.67
CCDC12-208ENST00000603885 LINC00167Q96N53 147 aa10.88□□□□□ -0.67
CCDC12-208ENST00000603885 IGLV5-37A0A075B6J1 123 aa10.87□□□□□ -0.67
CCDC12-208ENST00000603885 RPL37AP8A6NKH3 93 aa10.87□□□□□ -0.67
CCDC12-208ENST00000603885 BCE1O60756 84 aa10.87□□□□□ -0.67
CCDC12-208ENST00000603885 PFN2P35080 140 aa10.87□□□□□ -0.67
CCDC12-208ENST00000603885 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
CCDC12-208ENST00000603885 GAGE10A6NGK3 116 aa10.86□□□□□ -0.67
CCDC12-208ENST00000603885 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
CCDC12-208ENST00000603885 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
CCDC12-208ENST00000603885 RPL28P46779 137 aaKnown RBP10.86□□□□□ -0.67
CCDC12-208ENST00000603885 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
CCDC12-208ENST00000603885 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
CCDC12-208ENST00000603885 ERG28Q9UKR5 140 aa10.85□□□□□ -0.67
CCDC12-208ENST00000603885 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
CCDC12-208ENST00000603885 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
CCDC12-208ENST00000603885 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
CCDC12-208ENST00000603885 COX17Q14061 63 aa10.83□□□□□ -0.68
CCDC12-208ENST00000603885 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-208ENST00000603885 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
CCDC12-208ENST00000603885 SND1-IT1Q9HBX3 110 aa10.81□□□□□ -0.68
CCDC12-208ENST00000603885 TRAV12-1A0A0B4J245 112 aa10.8□□□□□ -0.68
CCDC12-208ENST00000603885 UBE2AP49459 152 aa10.79□□□□□ -0.68
CCDC12-208ENST00000603885 RPL24P83731 157 aaKnown RBP10.79□□□□□ -0.68
CCDC12-208ENST00000603885 CBLN2Q8IUK8 224 aa10.79□□□□□ -0.68
CCDC12-208ENST00000603885 IGKV2-28A0A075B6P5 120 aa10.78□□□□□ -0.68
CCDC12-208ENST00000603885 SCO1O75880 301 aa10.78□□□□□ -0.68
CCDC12-208ENST00000603885 IGKV2D-28P01615 120 aa10.78□□□□□ -0.68
CCDC12-208ENST00000603885 VPREB1P12018 145 aa10.78□□□□□ -0.68
CCDC12-208ENST00000603885 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
CCDC12-208ENST00000603885 HSBP1O75506 76 aa10.77□□□□□ -0.69
CCDC12-208ENST00000603885 LINC00158P58513 81 aa10.75□□□□□ -0.69
CCDC12-208ENST00000603885 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
CCDC12-208ENST00000603885 CRYGAP11844 174 aa10.74□□□□□ -0.69
CCDC12-208ENST00000603885 FAM19A2Q8N3H0 131 aa10.74□□□□□ -0.69
CCDC12-208ENST00000603885 A0A087X002 238 aa10.73□□□□□ -0.69
CCDC12-208ENST00000603885 TRGC2P03986 189 aa10.73□□□□□ -0.69
CCDC12-208ENST00000603885 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms