RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 C16orf74Q96GX8 76 aa7.54□□□□□ -1.2
LIG1-220ENST00000601091 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
LIG1-220ENST00000601091 PRRC2AP48634 2157 aaKnown RBP7.54□□□□□ -1.2
LIG1-220ENST00000601091 DOPEY1Q5JWR5 2465 aa7.54□□□□□ -1.2
LIG1-220ENST00000601091 ZFYVE26Q68DK2 2539 aa7.54□□□□□ -1.2
LIG1-220ENST00000601091 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
LIG1-220ENST00000601091 CLEC2BQ92478 149 aa7.54□□□□□ -1.2
LIG1-220ENST00000601091 UPK3BQ9BT76 320 aa7.54□□□□□ -1.2
LIG1-220ENST00000601091 A8MUN3 132 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 PIK3CD-AS1Q5SR53 167 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 TRBV30A0A0K0K1B3 111 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 C18orf65Q6ZTR6 163 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 SMCR5Q8TEV8 140 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 PKD1L2Q7Z442 2459 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 Q6ZTI0 123 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 ABCA12Q86UK0 2595 aa7.53□□□□□ -1.2
LIG1-220ENST00000601091 TRIAP1O43715 76 aa7.52□□□□□ -1.2
LIG1-220ENST00000601091 PRB2P02812 416 aaPredicted RBP7.52□□□□□ -1.2
LIG1-220ENST00000601091 H7C423 109 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 BAALC-AS2P0C853 105 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 COX7A2LO14548 114 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 UBE2BP63146 152 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 NKAPP1Q8N9T2 125 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 TM2D3Q9BRN9 247 aa7.52□□□□□ -1.21
LIG1-220ENST00000601091 RMI2Q96E14 147 aa7.51□□□□□ -1.21
LIG1-220ENST00000601091 MUC4Q99102 2169 aa7.5□□□□□ -1.21
LIG1-220ENST00000601091 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
LIG1-220ENST00000601091 DNAJC9-AS1A6NH13 148 aa7.5□□□□□ -1.21
LIG1-220ENST00000601091 NDUFA1O15239 70 aa7.5□□□□□ -1.21
LIG1-220ENST00000601091 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
LIG1-220ENST00000601091 ZNF843Q8N446 348 aa7.5□□□□□ -1.21
LIG1-220ENST00000601091 AMELXQ99217 191 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 CRYBG3Q68DQ2 2970 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 EPG5Q9HCE0 2579 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 LST1O00453 97 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 ITPR1Q14643 2758 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 ZFHX3Q15911 3703 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 MTORP42345 2549 aa7.49□□□□□ -1.21
LIG1-220ENST00000601091 HRNRQ86YZ3 2850 aaPredicted RBP7.48□□□□□ -1.21
LIG1-220ENST00000601091 CSMD2Q7Z408 3487 aa7.48□□□□□ -1.21
LIG1-220ENST00000601091 ZNF462Q96JM2 2506 aa7.48□□□□□ -1.21
LIG1-220ENST00000601091 ESRGQ1W209 222 aa7.48□□□□□ -1.21
LIG1-220ENST00000601091 SPATA3Q8NHX4 192 aa7.48□□□□□ -1.21
LIG1-220ENST00000601091 ANKRD17O75179 2603 aaKnown RBP7.48□□□□□ -1.21
LIG1-220ENST00000601091 H7BZZ5 65 aa7.47□□□□□ -1.21
LIG1-220ENST00000601091 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
LIG1-220ENST00000601091 A0A096LPF7 62 aa7.47□□□□□ -1.21
LIG1-220ENST00000601091 CHCHD7Q9BUK0 85 aa7.47□□□□□ -1.21
LIG1-220ENST00000601091 GYPEP15421 78 aa7.46□□□□□ -1.21
LIG1-220ENST00000601091 LCA10Q71F78 164 aa7.46□□□□□ -1.21
LIG1-220ENST00000601091 H0YGX0 51 aa7.46□□□□□ -1.22
LIG1-220ENST00000601091 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
LIG1-220ENST00000601091 LYPD5Q6UWN5 251 aa7.46□□□□□ -1.22
LIG1-220ENST00000601091 Q6ZVQ6 151 aa7.46□□□□□ -1.22
LIG1-220ENST00000601091 WFDC9Q8NEX5 89 aa7.46□□□□□ -1.22
LIG1-220ENST00000601091 ZANQ9Y493 2812 aa7.46□□□□□ -1.22
LIG1-220ENST00000601091 MP68P56378 58 aa7.45□□□□□ -1.22
LIG1-220ENST00000601091 UBE2AP49459 152 aa7.45□□□□□ -1.22
LIG1-220ENST00000601091 ODF3L2Q3SX64 289 aa7.45□□□□□ -1.22
LIG1-220ENST00000601091 Q6ZSN1 163 aa7.45□□□□□ -1.22
LIG1-220ENST00000601091 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
LIG1-220ENST00000601091 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
LIG1-220ENST00000601091 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
LIG1-220ENST00000601091 NANOS2P60321 138 aaKnown RBP7.44□□□□□ -1.22
LIG1-220ENST00000601091 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
LIG1-220ENST00000601091 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
LIG1-220ENST00000601091 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
LIG1-220ENST00000601091 KRTAP10-9P60411 292 aa7.43□□□□□ -1.22
LIG1-220ENST00000601091 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
LIG1-220ENST00000601091 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
LIG1-220ENST00000601091 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
LIG1-220ENST00000601091 Q9HAA7 133 aa7.41□□□□□ -1.22
LIG1-220ENST00000601091 PRO0255Q9UI72 69 aa7.41□□□□□ -1.22
LIG1-220ENST00000601091 COX6A2Q02221 97 aa7.4□□□□□ -1.22
LIG1-220ENST00000601091 LINC01006Q8NI28 216 aa7.4□□□□□ -1.22
LIG1-220ENST00000601091 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.22
LIG1-220ENST00000601091 SMIM1B2RUZ4 78 aa7.4□□□□□ -1.22
LIG1-220ENST00000601091 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
LIG1-220ENST00000601091 ACANP16112 2415 aa7.4□□□□□ -1.23
LIG1-220ENST00000601091 J3QKU1 62 aa7.4□□□□□ -1.23
LIG1-220ENST00000601091 LECT2O14960 151 aa7.4□□□□□ -1.23
LIG1-220ENST00000601091 NDUFC1O43677 76 aa7.4□□□□□ -1.23
LIG1-220ENST00000601091 C11orf72Q8NBR9 251 aa7.4□□□□□ -1.23
LIG1-220ENST00000601091 Q8N2B8 174 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 IBA57-AS1B1ANH7 110 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 EIF4EBP3O60516 100 aaPredicted RBP7.39□□□□□ -1.23
LIG1-220ENST00000601091 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 CELA1Q9UNI1 258 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 LOC100131303A0A0U1RQF7 123 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
LIG1-220ENST00000601091 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
LIG1-220ENST00000601091 BSNQ9UPA5 3926 aa7.38□□□□□ -1.23
LIG1-220ENST00000601091 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
LIG1-220ENST00000601091 Q6JHZ5 121 aa7.38□□□□□ -1.23
LIG1-220ENST00000601091 FLNCQ14315 2725 aa7.37□□□□□ -1.23
LIG1-220ENST00000601091 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms