RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 TRGC2P03986 189 aa14.62□□□□□ -0.07
SLC27A1-209ENST00000600297 RPL18AQ02543 176 aaKnown RBP14.62□□□□□ -0.07
SLC27A1-209ENST00000600297 C6orf226Q5I0X4 101 aa14.62□□□□□ -0.07
SLC27A1-209ENST00000600297 C7orf33Q8WU49 177 aa14.62□□□□□ -0.07
SLC27A1-209ENST00000600297 C6orf48Q9UBA6 75 aa14.62□□□□□ -0.07
SLC27A1-209ENST00000600297 PMCHL1Q16048 86 aa14.61□□□□□ -0.07
SLC27A1-209ENST00000600297 TOMM7Q9P0U1 55 aa14.61□□□□□ -0.07
SLC27A1-209ENST00000600297 COLCA2A8K830 154 aa14.6□□□□□ -0.07
SLC27A1-209ENST00000600297 CKS1BP61024 79 aa14.6□□□□□ -0.07
SLC27A1-209ENST00000600297 C2orf82Q6UX34 121 aa14.59□□□□□ -0.07
SLC27A1-209ENST00000600297 IGLC3P0DOY3 106 aa14.58□□□□□ -0.08
SLC27A1-209ENST00000600297 NDUFA6P56556 154 aa14.58□□□□□ -0.08
SLC27A1-209ENST00000600297 BAGE3Q86Y29 109 aa14.58□□□□□ -0.08
SLC27A1-209ENST00000600297 SMIM1B2RUZ4 78 aa14.57□□□□□ -0.08
SLC27A1-209ENST00000600297 H3BRM9 83 aa14.57□□□□□ -0.08
SLC27A1-209ENST00000600297 CXCL5P42830 114 aa14.57□□□□□ -0.08
SLC27A1-209ENST00000600297 HSBP1O75506 76 aa14.56□□□□□ -0.08
SLC27A1-209ENST00000600297 NDUFC2-KCTD14E9PQ53 114 aa14.55□□□□□ -0.08
SLC27A1-209ENST00000600297 Q6ZRP5 223 aa14.55□□□□□ -0.08
SLC27A1-209ENST00000600297 F8VRH5 84 aa14.53□□□□□ -0.08
SLC27A1-209ENST00000600297 C9orf116Q5BN46 136 aaPredicted RBP14.53□□□□□ -0.08
SLC27A1-209ENST00000600297 COX7B2Q8TF08 81 aa14.53□□□□□ -0.08
SLC27A1-209ENST00000600297 A0A1W2PNN7 141 aa14.52□□□□□ -0.09
SLC27A1-209ENST00000600297 IFI27L1Q96BM0 104 aa14.52□□□□□ -0.09
SLC27A1-209ENST00000600297 OXTP01178 125 aa14.51□□□□□ -0.09
SLC27A1-209ENST00000600297 SPINK8P0C7L1 97 aa14.51□□□□□ -0.09
SLC27A1-209ENST00000600297 TRAV12-1A0A0B4J245 112 aa14.5□□□□□ -0.09
SLC27A1-209ENST00000600297 ZNF22P17026 224 aaPredicted RBP14.49□□□□□ -0.09
SLC27A1-209ENST00000600297 GAGE2EQ4V326 116 aa14.49□□□□□ -0.09
SLC27A1-209ENST00000600297 GAGE2DQ9UEU5 116 aa14.49□□□□□ -0.09
SLC27A1-209ENST00000600297 FAM19A2Q8N3H0 131 aa14.48□□□□□ -0.09
SLC27A1-209ENST00000600297 CHTOPQ9Y3Y2 248 aaKnown RBP14.48□□□□□ -0.09
SLC27A1-209ENST00000600297 IGLV5-39A0A0G2JS06 123 aa14.47□□□□□ -0.09
SLC27A1-209ENST00000600297 SERF1AO75920 110 aa14.47□□□□□ -0.09
SLC27A1-209ENST00000600297 HNRNPA3P51991 378 aaKnown RBP14.46□□□□□ -0.09
SLC27A1-209ENST00000600297 PKHD1L1Q86WI1 4243 aa14.45□□□□□ -0.1
SLC27A1-209ENST00000600297 C11orf86A6NJI1 115 aa14.45□□□□□ -0.1
SLC27A1-209ENST00000600297 SCO1O75880 301 aa14.45□□□□□ -0.1
SLC27A1-209ENST00000600297 LINC00310P59036 64 aa14.45□□□□□ -0.1
SLC27A1-209ENST00000600297 PRR3P79522 188 aaKnown RBP14.45□□□□□ -0.1
SLC27A1-209ENST00000600297 LEPROTL1O95214 131 aa14.44□□□□□ -0.1
SLC27A1-209ENST00000600297 TMEM170BQ5T4T1 132 aa14.44□□□□□ -0.1
SLC27A1-209ENST00000600297 FAM168BA1KXE4 195 aa14.41□□□□□ -0.1
SLC27A1-209ENST00000600297 C9orf129Q5T035 196 aaKnown RBP14.41□□□□□ -0.1
SLC27A1-209ENST00000600297 LRP1Q07954 4544 aaKnown RBP14.4□□□□□ -0.1
SLC27A1-209ENST00000600297 SFTA2Q6UW10 78 aa14.4□□□□□ -0.1
SLC27A1-209ENST00000600297 HSPB8Q9UJY1 196 aa14.4□□□□□ -0.1
SLC27A1-209ENST00000600297 PHF5AQ7RTV0 110 aaKnown RBP14.39□□□□□ -0.11
SLC27A1-209ENST00000600297 FAM19A5Q7Z5A7 132 aaPredicted RBP14.39□□□□□ -0.11
SLC27A1-209ENST00000600297 NUPR1O60356 82 aa14.38□□□□□ -0.11
SLC27A1-209ENST00000600297 ODF1Q14990 250 aa14.38□□□□□ -0.11
SLC27A1-209ENST00000600297 SERTAD4-AS1Q5TG53 156 aa14.38□□□□□ -0.11
SLC27A1-209ENST00000600297 FAT3Q8TDW7 4589 aa14.37□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BKO60814 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BJP06899 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BOP23527 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BBP33778 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BDP58876 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BCP62807 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST2H2BEQ16778 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BHQ93079 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BNQ99877 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 HIST1H2BMQ99879 126 aa14.36□□□□□ -0.11
SLC27A1-209ENST00000600297 TMEM223A0PJW6 202 aa14.35□□□□□ -0.11
SLC27A1-209ENST00000600297 M0QXV9 152 aa14.35□□□□□ -0.11
SLC27A1-209ENST00000600297 XAGE1AQ9HD64 81 aa14.35□□□□□ -0.11
SLC27A1-209ENST00000600297 PSORS1C2Q9UIG4 136 aa14.34□□□□□ -0.11
SLC27A1-209ENST00000600297 FABP4P15090 132 aa14.33□□□□□ -0.12
SLC27A1-209ENST00000600297 COX17Q14061 63 aa14.33□□□□□ -0.12
SLC27A1-209ENST00000600297 H0Y8G0 127 aa14.32□□□□□ -0.12
SLC27A1-209ENST00000600297 SPINK6Q6UWN8 80 aa14.32□□□□□ -0.12
SLC27A1-209ENST00000600297 PLNP26678 52 aa14.3□□□□□ -0.12
SLC27A1-209ENST00000600297 SRSF9Q13242 221 aaKnown RBP eCLIP14.3□□□□□ -0.12
SLC27A1-209ENST00000600297 TP73-AS1Q9UF72 201 aa14.3□□□□□ -0.12
SLC27A1-209ENST00000600297 ERG28Q9UKR5 140 aa14.3□□□□□ -0.12
SLC27A1-209ENST00000600297 PLA2G2DQ9UNK4 145 aa14.3□□□□□ -0.12
SLC27A1-209ENST00000600297 S100A1P23297 94 aa14.29□□□□□ -0.12
SLC27A1-209ENST00000600297 UBE2BP63146 152 aa14.29□□□□□ -0.12
SLC27A1-209ENST00000600297 LBHQ53QV2 105 aaPredicted RBP14.29□□□□□ -0.12
SLC27A1-209ENST00000600297 ZNF625Q96I27 306 aaPredicted RBP14.29□□□□□ -0.12
SLC27A1-209ENST00000600297 MAP1LC3CQ9BXW4 147 aa14.29□□□□□ -0.12
SLC27A1-209ENST00000600297 C22orf24Q9Y442 160 aa14.29□□□□□ -0.12
SLC27A1-209ENST00000600297 PFN2P35080 140 aa14.28□□□□□ -0.12
SLC27A1-209ENST00000600297 C1orf137Q5JT78 98 aa14.28□□□□□ -0.12
SLC27A1-209ENST00000600297 DPM2O94777 84 aa14.26□□□□□ -0.13
SLC27A1-209ENST00000600297 COA6Q5JTJ3 125 aaKnown RBP14.24□□□□□ -0.13
SLC27A1-209ENST00000600297 KRTAP11-1Q8IUC1 163 aa14.24□□□□□ -0.13
SLC27A1-209ENST00000600297 MRPL55Q7Z7F7 128 aaKnown RBP14.23□□□□□ -0.13
SLC27A1-209ENST00000600297 IGLV5-37A0A075B6J1 123 aa14.22□□□□□ -0.13
SLC27A1-209ENST00000600297 IGKCP01834 107 aa14.22□□□□□ -0.13
SLC27A1-209ENST00000600297 IGLV7-43P04211 117 aa14.22□□□□□ -0.13
SLC27A1-209ENST00000600297 HERV-K104P63124 156 aa14.22□□□□□ -0.13
SLC27A1-209ENST00000600297 REG3GQ6UW15 175 aa14.22□□□□□ -0.13
SLC27A1-209ENST00000600297 MT1HL1P0DM35 61 aa14.21□□□□□ -0.13
SLC27A1-209ENST00000600297 SND1-IT1Q9HBX3 110 aa14.21□□□□□ -0.13
SLC27A1-209ENST00000600297 LINC00587B1AMM8 73 aa14.2□□□□□ -0.14
SLC27A1-209ENST00000600297 HERVK_113P61574 105 aa14.2□□□□□ -0.14
SLC27A1-209ENST00000600297 PLEKHB2Q96CS7 222 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms