RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
TGFB1-204ENST00000600196 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
TGFB1-204ENST00000600196 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
TGFB1-204ENST00000600196 FRAS1Q86XX4 4008 aa7.97□□□□□ -1.13
TGFB1-204ENST00000600196 GCSHP23434 173 aa7.97□□□□□ -1.13
TGFB1-204ENST00000600196 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
TGFB1-204ENST00000600196 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
TGFB1-204ENST00000600196 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
TGFB1-204ENST00000600196 J3QQQ9 107 aa7.96□□□□□ -1.14
TGFB1-204ENST00000600196 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
TGFB1-204ENST00000600196 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
TGFB1-204ENST00000600196 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.95□□□□□ -1.14
TGFB1-204ENST00000600196 KRTAP10-2P60368 255 aa7.95□□□□□ -1.14
TGFB1-204ENST00000600196 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
TGFB1-204ENST00000600196 Q6ZRU5 148 aa7.95□□□□□ -1.14
TGFB1-204ENST00000600196 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
TGFB1-204ENST00000600196 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
TGFB1-204ENST00000600196 UNQ6190/PRO20217Q6UXQ8 127 aa7.94□□□□□ -1.14
TGFB1-204ENST00000600196 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
TGFB1-204ENST00000600196 STPG4Q8N801 248 aa7.93□□□□□ -1.14
TGFB1-204ENST00000600196 C6orf48Q9UBA6 75 aa7.93□□□□□ -1.14
TGFB1-204ENST00000600196 NDUFA12Q9UI09 145 aa7.93□□□□□ -1.14
TGFB1-204ENST00000600196 C16orf90A8MZG2 172 aa7.92□□□□□ -1.14
TGFB1-204ENST00000600196 C2orf82Q6UX34 121 aa7.92□□□□□ -1.14
TGFB1-204ENST00000600196 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
TGFB1-204ENST00000600196 CIRBPQ14011 172 aaKnown RBP7.91□□□□□ -1.14
TGFB1-204ENST00000600196 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
TGFB1-204ENST00000600196 DNAH11Q96DT5 4516 aa7.91□□□□□ -1.14
TGFB1-204ENST00000600196 Q6ZSA8 131 aa7.9□□□□□ -1.14
TGFB1-204ENST00000600196 TIMM17BO60830 172 aa7.89□□□□□ -1.15
TGFB1-204ENST00000600196 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
TGFB1-204ENST00000600196 ERG28Q9UKR5 140 aa7.89□□□□□ -1.15
TGFB1-204ENST00000600196 PKD1P98161 4303 aa7.89□□□□□ -1.15
TGFB1-204ENST00000600196 DLEU1O43261 78 aa7.88□□□□□ -1.15
TGFB1-204ENST00000600196 PTTG1IPP53801 180 aa7.88□□□□□ -1.15
TGFB1-204ENST00000600196 ANKRD39Q53RE8 183 aa7.88□□□□□ -1.15
TGFB1-204ENST00000600196 ATOH7Q8N100 152 aa7.88□□□□□ -1.15
TGFB1-204ENST00000600196 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
TGFB1-204ENST00000600196 IGKV2D-26A0A0A0MRZ7 120 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 LOC107984156A0A0G2JMH3 177 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 A0A0J9YXY3 114 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 Q6ZVH6 145 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 ARL17AQ8IVW1 177 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 VAMP8Q9BV40 100 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
TGFB1-204ENST00000600196 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
TGFB1-204ENST00000600196 KRTAP10-1P60331 282 aa7.86□□□□□ -1.15
TGFB1-204ENST00000600196 S100A12P80511 92 aa7.86□□□□□ -1.15
TGFB1-204ENST00000600196 COPS9Q8WXC6 57 aa7.86□□□□□ -1.15
TGFB1-204ENST00000600196 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
TGFB1-204ENST00000600196 SMIM6P0DI80 62 aa7.85□□□□□ -1.15
TGFB1-204ENST00000600196 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
TGFB1-204ENST00000600196 Q6ZRP5 223 aa7.85□□□□□ -1.15
TGFB1-204ENST00000600196 SPACA4Q8TDM5 124 aa7.85□□□□□ -1.15
TGFB1-204ENST00000600196 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
TGFB1-204ENST00000600196 COX8AP10176 69 aa7.84□□□□□ -1.15
TGFB1-204ENST00000600196 LINC00158P58513 81 aa7.84□□□□□ -1.15
TGFB1-204ENST00000600196 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.15
TGFB1-204ENST00000600196 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
TGFB1-204ENST00000600196 A0A096LNI7 61 aa7.83□□□□□ -1.16
TGFB1-204ENST00000600196 TMEM238C9JI98 176 aa7.83□□□□□ -1.16
TGFB1-204ENST00000600196 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
TGFB1-204ENST00000600196 GAGE2BQ13066 116 aa7.83□□□□□ -1.16
TGFB1-204ENST00000600196 MAJINQ3KP22 176 aa7.83□□□□□ -1.16
TGFB1-204ENST00000600196 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
TGFB1-204ENST00000600196 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
TGFB1-204ENST00000600196 IFITM1P13164 125 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 PFN2P35080 140 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 TP73-AS1Q9UF72 201 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 DNAH5Q8TE73 4624 aa7.82□□□□□ -1.16
TGFB1-204ENST00000600196 SMIM13P0DJ93 91 aa7.81□□□□□ -1.16
TGFB1-204ENST00000600196 RPL24P83731 157 aaKnown RBP7.81□□□□□ -1.16
TGFB1-204ENST00000600196 PCP2Q8IVA1 136 aa7.81□□□□□ -1.16
TGFB1-204ENST00000600196 DPH3Q96FX2 82 aa7.81□□□□□ -1.16
TGFB1-204ENST00000600196 SND1-IT1Q9HBX3 110 aa7.81□□□□□ -1.16
TGFB1-204ENST00000600196 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 GAGE2EQ4V326 116 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
TGFB1-204ENST00000600196 SPANXCQ9NY87 97 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 GAGE2DQ9UEU5 116 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 PAM16Q9Y3D7 125 aa7.8□□□□□ -1.16
TGFB1-204ENST00000600196 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
TGFB1-204ENST00000600196 A0A087WYN8 130 aa7.79□□□□□ -1.16
TGFB1-204ENST00000600196 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
TGFB1-204ENST00000600196 NDUFC2O95298 119 aa7.79□□□□□ -1.16
TGFB1-204ENST00000600196 FUSP35637 526 aaKnown RBP eCLIP7.79□□□□□ -1.16
TGFB1-204ENST00000600196 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
TGFB1-204ENST00000600196 MIR7-3HGQ8N6C7 128 aa7.79□□□□□ -1.16
TGFB1-204ENST00000600196 LITAFQ99732 161 aa7.79□□□□□ -1.16
TGFB1-204ENST00000600196 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
TGFB1-204ENST00000600196 LBHQ53QV2 105 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms