RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CHTOPQ9Y3Y2 248 aaKnown RBP9.22□□□□□ -0.93
IRF3-223ENST00000599223 RNF213Q63HN8 5207 aa9.21□□□□□ -0.93
IRF3-223ENST00000599223 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.94
IRF3-223ENST00000599223 F8VRH5 84 aa9.21□□□□□ -0.94
IRF3-223ENST00000599223 IGKCP01834 107 aa9.21□□□□□ -0.94
IRF3-223ENST00000599223 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
IRF3-223ENST00000599223 PMCHL2Q9BQD1 86 aa9.21□□□□□ -0.94
IRF3-223ENST00000599223 C2orf88Q9BSF0 95 aa9.21□□□□□ -0.94
IRF3-223ENST00000599223 A0A096LNI7 61 aa9.2□□□□□ -0.94
IRF3-223ENST00000599223 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
IRF3-223ENST00000599223 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
IRF3-223ENST00000599223 ZNF25P17030 456 aaPredicted RBP9.19□□□□□ -0.94
IRF3-223ENST00000599223 FOXI1Q12951 378 aa9.19□□□□□ -0.94
IRF3-223ENST00000599223 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
IRF3-223ENST00000599223 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
IRF3-223ENST00000599223 CST9LQ9H4G1 147 aa9.19□□□□□ -0.94
IRF3-223ENST00000599223 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
IRF3-223ENST00000599223 UBE2D4Q9Y2X8 147 aa9.19□□□□□ -0.94
IRF3-223ENST00000599223 IGLV4-3A0A075B6K6 122 aa9.18□□□□□ -0.94
IRF3-223ENST00000599223 FGF6P10767 208 aa9.18□□□□□ -0.94
IRF3-223ENST00000599223 MRPS36P82909 103 aaKnown RBP9.18□□□□□ -0.94
IRF3-223ENST00000599223 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
IRF3-223ENST00000599223 C7orf33Q8WU49 177 aa9.18□□□□□ -0.94
IRF3-223ENST00000599223 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
IRF3-223ENST00000599223 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
IRF3-223ENST00000599223 HERVK_113P61574 105 aa9.17□□□□□ -0.94
IRF3-223ENST00000599223 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
IRF3-223ENST00000599223 STPG4Q8N801 248 aa9.17□□□□□ -0.94
IRF3-223ENST00000599223 PRO1933Q9H354 126 aa9.17□□□□□ -0.94
IRF3-223ENST00000599223 XCL1P47992 114 aa9.16□□□□□ -0.94
IRF3-223ENST00000599223 SEC11AP67812 179 aa9.15□□□□□ -0.94
IRF3-223ENST00000599223 LINC01600Q96MT4 127 aa9.15□□□□□ -0.94
IRF3-223ENST00000599223 UQCR10Q9UDW1 63 aa9.15□□□□□ -0.94
IRF3-223ENST00000599223 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
IRF3-223ENST00000599223 AMELXQ99217 191 aa9.14□□□□□ -0.95
IRF3-223ENST00000599223 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
IRF3-223ENST00000599223 CCL25O15444 150 aa9.13□□□□□ -0.95
IRF3-223ENST00000599223 Q6ZUT4 128 aa9.13□□□□□ -0.95
IRF3-223ENST00000599223 MIEN1Q9BRT3 115 aa9.13□□□□□ -0.95
IRF3-223ENST00000599223 LINC00959A0A1B0GUT2 108 aa9.12□□□□□ -0.95
IRF3-223ENST00000599223 DDTP30046 118 aa9.12□□□□□ -0.95
IRF3-223ENST00000599223 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
IRF3-223ENST00000599223 CARD19Q96LW7 228 aa9.12□□□□□ -0.95
IRF3-223ENST00000599223 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
IRF3-223ENST00000599223 IGLC3P0DOY3 106 aa9.11□□□□□ -0.95
IRF3-223ENST00000599223 NMUP48645 174 aa9.11□□□□□ -0.95
IRF3-223ENST00000599223 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
IRF3-223ENST00000599223 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
IRF3-223ENST00000599223 IGLV4-69A0A075B6H9 119 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 A0A0J9YXV3 536 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 C11orf86A6NJI1 115 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 H3BRM9 83 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
IRF3-223ENST00000599223 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
IRF3-223ENST00000599223 HERVK_113P63121 156 aa9.09□□□□□ -0.95
IRF3-223ENST00000599223 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
IRF3-223ENST00000599223 COX8AP10176 69 aa9.08□□□□□ -0.96
IRF3-223ENST00000599223 UBE2D1P51668 147 aa9.08□□□□□ -0.96
IRF3-223ENST00000599223 KRTAP10-8P60410 259 aa9.08□□□□□ -0.96
IRF3-223ENST00000599223 TRAV13-1A0A0B4J241 112 aa9.07□□□□□ -0.96
IRF3-223ENST00000599223 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
IRF3-223ENST00000599223 SRSF9Q13242 221 aaKnown RBP eCLIP9.07□□□□□ -0.96
IRF3-223ENST00000599223 CD164L2Q6UWJ8 174 aa9.07□□□□□ -0.96
IRF3-223ENST00000599223 SPINK6Q6UWN8 80 aa9.07□□□□□ -0.96
IRF3-223ENST00000599223 LINC00469Q8N7U9 141 aa9.07□□□□□ -0.96
IRF3-223ENST00000599223 LINC00474Q9P2X8 69 aa9.07□□□□□ -0.96
IRF3-223ENST00000599223 E9PLD3 99 aa9.06□□□□□ -0.96
IRF3-223ENST00000599223 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
IRF3-223ENST00000599223 SS18Q15532 418 aa9.06□□□□□ -0.96
IRF3-223ENST00000599223 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
IRF3-223ENST00000599223 LPAP08519 4548 aa9.05□□□□□ -0.96
IRF3-223ENST00000599223 DLEU1O43261 78 aa9.05□□□□□ -0.96
IRF3-223ENST00000599223 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
IRF3-223ENST00000599223 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
IRF3-223ENST00000599223 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
IRF3-223ENST00000599223 A0A1W2PNN7 141 aa9.04□□□□□ -0.96
IRF3-223ENST00000599223 ZNF561-AS1K7EIQ3 104 aa9.04□□□□□ -0.96
IRF3-223ENST00000599223 LGALS3P17931 250 aaKnown RBP9.04□□□□□ -0.96
IRF3-223ENST00000599223 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
IRF3-223ENST00000599223 REG3GQ6UW15 175 aa9.04□□□□□ -0.96
IRF3-223ENST00000599223 Q6ZRP5 223 aa9.04□□□□□ -0.96
IRF3-223ENST00000599223 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
IRF3-223ENST00000599223 BOD1L2Q8IYS8 172 aa9.03□□□□□ -0.96
IRF3-223ENST00000599223 PKIGQ9Y2B9 76 aa9.03□□□□□ -0.96
IRF3-223ENST00000599223 LEPROTO15243 131 aa9.02□□□□□ -0.97
IRF3-223ENST00000599223 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
IRF3-223ENST00000599223 IGLV5-45A0A087WSX0 123 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 LOC107984640A0A0U1RRK4 108 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 MYMXA0A1B0GTQ4 84 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 LINC00587B1AMM8 73 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 COX7A2LO14548 114 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 PCP2Q8IVA1 136 aa9.01□□□□□ -0.97
IRF3-223ENST00000599223 ZNF815PA8K554 130 aa9□□□□□ -0.97
IRF3-223ENST00000599223 J3QQQ9 107 aa9□□□□□ -0.97
IRF3-223ENST00000599223 APOMO95445 188 aa9□□□□□ -0.97
IRF3-223ENST00000599223 SCGB1D4Q6XE38 83 aa9□□□□□ -0.97
IRF3-223ENST00000599223 CDKN2A-AS1Q9UH64 79 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms