RNA–Protein interactions for RNA: ENST00000598155.5

SYMPK-209, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-209ENST00000598155 TMEM170BQ5T4T1 132 aa13.13□□□□□ -0.31
SYMPK-209ENST00000598155 Q6ZUT4 128 aa13.13□□□□□ -0.31
SYMPK-209ENST00000598155 SRRM2Q9UQ35 2752 aaKnown RBP13.12□□□□□ -0.31
SYMPK-209ENST00000598155 TMEM223A0PJW6 202 aa13.12□□□□□ -0.31
SYMPK-209ENST00000598155 H7C423 109 aa13.12□□□□□ -0.31
SYMPK-209ENST00000598155 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
SYMPK-209ENST00000598155 Q6ZVH6 145 aa13.12□□□□□ -0.31
SYMPK-209ENST00000598155 HERC1Q15751 4861 aa13.11□□□□□ -0.31
SYMPK-209ENST00000598155 A0A0J9YXV3 536 aa13.11□□□□□ -0.31
SYMPK-209ENST00000598155 MIAQ16674 131 aa13.11□□□□□ -0.31
SYMPK-209ENST00000598155 CSDC2Q9Y534 153 aaKnown RBP13.11□□□□□ -0.31
SYMPK-209ENST00000598155 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
SYMPK-209ENST00000598155 LINC01620Q4KN68 170 aa13.1□□□□□ -0.31
SYMPK-209ENST00000598155 RNASE13Q5GAN3 156 aaKnown RBP13.1□□□□□ -0.31
SYMPK-209ENST00000598155 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
SYMPK-209ENST00000598155 CEND1Q8N111 149 aa13.1□□□□□ -0.31
SYMPK-209ENST00000598155 FLG2Q5D862 2391 aaPredicted RBP13.1□□□□□ -0.31
SYMPK-209ENST00000598155 ZNF815PA8K554 130 aa13.1□□□□□ -0.31
SYMPK-209ENST00000598155 H3BRM9 83 aa13.1□□□□□ -0.31
SYMPK-209ENST00000598155 MYCBP2O75592 4640 aa13.09□□□□□ -0.31
SYMPK-209ENST00000598155 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
SYMPK-209ENST00000598155 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
SYMPK-209ENST00000598155 TINCRA0A1B0GVN0 87 aa13.08□□□□□ -0.32
SYMPK-209ENST00000598155 LEPROTO15243 131 aa13.08□□□□□ -0.32
SYMPK-209ENST00000598155 RBX1P62877 108 aa13.08□□□□□ -0.32
SYMPK-209ENST00000598155 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
SYMPK-209ENST00000598155 PRR34Q9NV39 138 aa13.08□□□□□ -0.32
SYMPK-209ENST00000598155 FXYD2P54710 66 aa13.07□□□□□ -0.32
SYMPK-209ENST00000598155 TSPEAR-AS2P59090 65 aa13.07□□□□□ -0.32
SYMPK-209ENST00000598155 GAGE6Q13070 117 aa13.07□□□□□ -0.32
SYMPK-209ENST00000598155 SCXQ7RTU7 201 aa13.07□□□□□ -0.32
SYMPK-209ENST00000598155 J3QQQ9 107 aa13.06□□□□□ -0.32
SYMPK-209ENST00000598155 USP17L23D6RBM5 183 aa13.05□□□□□ -0.32
SYMPK-209ENST00000598155 UBE2D1P51668 147 aa13.05□□□□□ -0.32
SYMPK-209ENST00000598155 FAM19A3Q7Z5A8 133 aa13.05□□□□□ -0.32
SYMPK-209ENST00000598155 PLEKHB2Q96CS7 222 aa13.05□□□□□ -0.32
SYMPK-209ENST00000598155 LINC00269Q8N2A0 174 aa13.04□□□□□ -0.32
SYMPK-209ENST00000598155 HIST1H4GQ99525 98 aa13.04□□□□□ -0.32
SYMPK-209ENST00000598155 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
SYMPK-209ENST00000598155 C9orf118A6NHY6 69 aa13.03□□□□□ -0.32
SYMPK-209ENST00000598155 CLPSL2Q6UWE3 100 aa13.03□□□□□ -0.32
SYMPK-209ENST00000598155 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.32
SYMPK-209ENST00000598155 UBE2V1Q13404 147 aa13.02□□□□□ -0.32
SYMPK-209ENST00000598155 SCGB1D4Q6XE38 83 aa13.02□□□□□ -0.32
SYMPK-209ENST00000598155 IGLV5-45A0A087WSX0 123 aa13.02□□□□□ -0.33
SYMPK-209ENST00000598155 SMIM13P0DJ93 91 aa13.02□□□□□ -0.33
SYMPK-209ENST00000598155 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
SYMPK-209ENST00000598155 SPANXB1Q9NS25 103 aaPredicted RBP13.02□□□□□ -0.33
SYMPK-209ENST00000598155 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
SYMPK-209ENST00000598155 KRTAP26-1Q6PEX3 210 aa13.01□□□□□ -0.33
SYMPK-209ENST00000598155 CIRBP-AS1Q8TBR5 109 aa13.01□□□□□ -0.33
SYMPK-209ENST00000598155 IGHV1-58A0A0C4DH39 117 aa13□□□□□ -0.33
SYMPK-209ENST00000598155 REG3AQ06141 175 aa13□□□□□ -0.33
SYMPK-209ENST00000598155 A0A1B0GUV1 79 aa12.99□□□□□ -0.33
SYMPK-209ENST00000598155 VAMP3Q15836 100 aa12.99□□□□□ -0.33
SYMPK-209ENST00000598155 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
SYMPK-209ENST00000598155 HERVK_113P63121 156 aa12.99□□□□□ -0.33
SYMPK-209ENST00000598155 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
SYMPK-209ENST00000598155 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
SYMPK-209ENST00000598155 CCL25O15444 150 aa12.98□□□□□ -0.33
SYMPK-209ENST00000598155 IGLV4-60A0A075B6I1 120 aa12.97□□□□□ -0.33
SYMPK-209ENST00000598155 NHP2Q9NX24 153 aaKnown RBP12.97□□□□□ -0.33
SYMPK-209ENST00000598155 J3QL48 77 aa12.96□□□□□ -0.33
SYMPK-209ENST00000598155 LINC00242Q5T6M2 205 aa12.96□□□□□ -0.33
SYMPK-209ENST00000598155 IGHV3-64A0A075B6Q5 118 aa12.95□□□□□ -0.34
SYMPK-209ENST00000598155 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYMPK-209ENST00000598155 C9orf163Q8N9P6 203 aa12.95□□□□□ -0.34
SYMPK-209ENST00000598155 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
SYMPK-209ENST00000598155 IGLV10-54A0A075B6I4 117 aa12.95□□□□□ -0.34
SYMPK-209ENST00000598155 H3BUT2 72 aa12.95□□□□□ -0.34
SYMPK-209ENST00000598155 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
SYMPK-209ENST00000598155 COX6A2Q02221 97 aa12.94□□□□□ -0.34
SYMPK-209ENST00000598155 TMEM238LA0A1B0GVL6 79 aa12.93□□□□□ -0.34
SYMPK-209ENST00000598155 A6NJY4 79 aa12.93□□□□□ -0.34
SYMPK-209ENST00000598155 KRTAP29-1A8MX34 341 aaPredicted RBP12.93□□□□□ -0.34
SYMPK-209ENST00000598155 K7ERJ3 54 aa12.93□□□□□ -0.34
SYMPK-209ENST00000598155 A0A1W2PPM0 123 aa12.92□□□□□ -0.34
SYMPK-209ENST00000598155 SPINK8P0C7L1 97 aa12.92□□□□□ -0.34
SYMPK-209ENST00000598155 KRTAP10-4P60372 401 aaPredicted RBP12.92□□□□□ -0.34
SYMPK-209ENST00000598155 IGKV3OR2-268A0A0C4DH90 116 aa12.91□□□□□ -0.34
SYMPK-209ENST00000598155 IGLV5-39A0A0G2JS06 123 aa12.91□□□□□ -0.34
SYMPK-209ENST00000598155 A0A0J9YXY3 114 aa12.91□□□□□ -0.34
SYMPK-209ENST00000598155 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
SYMPK-209ENST00000598155 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
SYMPK-209ENST00000598155 TMEM238C9JI98 176 aa12.88□□□□□ -0.35
SYMPK-209ENST00000598155 NAA38Q9BRA0 125 aaKnown RBP12.88□□□□□ -0.35
SYMPK-209ENST00000598155 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
SYMPK-209ENST00000598155 K7EP34 96 aa12.88□□□□□ -0.35
SYMPK-209ENST00000598155 SDIM1Q6ZPB5 146 aa12.88□□□□□ -0.35
SYMPK-209ENST00000598155 GTF2H5Q6ZYL4 71 aa12.88□□□□□ -0.35
SYMPK-209ENST00000598155 LITAFQ99732 161 aa12.88□□□□□ -0.35
SYMPK-209ENST00000598155 LINC00959A0A1B0GUT2 108 aa12.87□□□□□ -0.35
SYMPK-209ENST00000598155 SMIM1B2RUZ4 78 aa12.87□□□□□ -0.35
SYMPK-209ENST00000598155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
SYMPK-209ENST00000598155 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.86□□□□□ -0.35
SYMPK-209ENST00000598155 NDUFA1O15239 70 aa12.86□□□□□ -0.35
SYMPK-209ENST00000598155 FABP2P12104 132 aa12.86□□□□□ -0.35
SYMPK-209ENST00000598155 RPL37AP61513 92 aaKnown RBP12.86□□□□□ -0.35
SYMPK-209ENST00000598155 SS18Q15532 418 aa12.86□□□□□ -0.35
SYMPK-209ENST00000598155 TIMM17BO60830 172 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms