RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 C5orf52A6NGY3 159 aa14.25□□□□□ -0.13
CHMP2A-204ENST00000597848 SDIM1Q6ZPB5 146 aa14.25□□□□□ -0.13
CHMP2A-204ENST00000597848 LINC01545Q5VT33 79 aa14.24□□□□□ -0.13
CHMP2A-204ENST00000597848 TMA7Q9Y2S6 64 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-204ENST00000597848 C20orf202A1L168 122 aa14.22□□□□□ -0.13
CHMP2A-204ENST00000597848 CXCL5P42830 114 aa14.22□□□□□ -0.13
CHMP2A-204ENST00000597848 RNF151Q2KHN1 245 aa14.22□□□□□ -0.13
CHMP2A-204ENST00000597848 C6orf48Q9UBA6 75 aa14.22□□□□□ -0.13
CHMP2A-204ENST00000597848 FAM30AQ9NZY2 134 aa14.21□□□□□ -0.13
CHMP2A-204ENST00000597848 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
CHMP2A-204ENST00000597848 TRBV30A0A0K0K1B3 111 aa14.2□□□□□ -0.14
CHMP2A-204ENST00000597848 HERVK_113P61574 105 aa14.2□□□□□ -0.14
CHMP2A-204ENST00000597848 PKHD1P08F94 4074 aa14.2□□□□□ -0.14
CHMP2A-204ENST00000597848 LOC107984640A0A0U1RRK4 108 aa14.19□□□□□ -0.14
CHMP2A-204ENST00000597848 DPH3Q96FX2 82 aa14.18□□□□□ -0.14
CHMP2A-204ENST00000597848 C9orf116Q5BN46 136 aaPredicted RBP14.17□□□□□ -0.14
CHMP2A-204ENST00000597848 DNAH5Q8TE73 4624 aa14.16□□□□□ -0.14
CHMP2A-204ENST00000597848 IGKV2-24A0A0C4DH68 120 aa14.16□□□□□ -0.14
CHMP2A-204ENST00000597848 RPL18AQ02543 176 aaKnown RBP14.16□□□□□ -0.14
CHMP2A-204ENST00000597848 GAGE2BQ13066 116 aa14.16□□□□□ -0.14
CHMP2A-204ENST00000597848 DYNC1H1Q14204 4646 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-204ENST00000597848 CHTF8P0CG12 524 aa14.15□□□□□ -0.14
CHMP2A-204ENST00000597848 Q6ZSA8 131 aa14.15□□□□□ -0.14
CHMP2A-204ENST00000597848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.15□□□□□ -0.14
CHMP2A-204ENST00000597848 A0A096LNI7 61 aa14.14□□□□□ -0.15
CHMP2A-204ENST00000597848 LEPROTO15243 131 aa14.14□□□□□ -0.15
CHMP2A-204ENST00000597848 HAMPP81172 84 aa14.14□□□□□ -0.15
CHMP2A-204ENST00000597848 PLEKHB2Q96CS7 222 aa14.14□□□□□ -0.15
CHMP2A-204ENST00000597848 CDK2AP2O75956 126 aa14.13□□□□□ -0.15
CHMP2A-204ENST00000597848 BIRC6Q9NR09 4857 aa14.13□□□□□ -0.15
CHMP2A-204ENST00000597848 PANO1I0J062 215 aa14.12□□□□□ -0.15
CHMP2A-204ENST00000597848 AKR1D1P51857 326 aa14.12□□□□□ -0.15
CHMP2A-204ENST00000597848 MAJINQ3KP22 176 aa14.12□□□□□ -0.15
CHMP2A-204ENST00000597848 STPG4Q8N801 248 aa14.12□□□□□ -0.15
CHMP2A-204ENST00000597848 TLX1NBP0CAT3 122 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 PTTG1IPP53801 180 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 XGP55808 180 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 GAGE2EQ4V326 116 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 SFTA2Q6UW10 78 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 ATOH7Q8N100 152 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 ZNF625Q96I27 306 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 LINC00474Q9P2X8 69 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 GAGE2DQ9UEU5 116 aa14.11□□□□□ -0.15
CHMP2A-204ENST00000597848 NDUFC2-KCTD14E9PQ53 114 aa14.1□□□□□ -0.15
CHMP2A-204ENST00000597848 J3QQQ9 107 aa14.09□□□□□ -0.15
CHMP2A-204ENST00000597848 LGALS3P17931 250 aaKnown RBP14.09□□□□□ -0.15
CHMP2A-204ENST00000597848 Q6ZRP5 223 aa14.09□□□□□ -0.15
CHMP2A-204ENST00000597848 SPACA4Q8TDM5 124 aa14.09□□□□□ -0.15
CHMP2A-204ENST00000597848 NDUFA12Q9UI09 145 aa14.09□□□□□ -0.15
CHMP2A-204ENST00000597848 LRP1BQ9NZR2 4599 aa14.08□□□□□ -0.15
CHMP2A-204ENST00000597848 E9PLD3 99 aa14.08□□□□□ -0.16
CHMP2A-204ENST00000597848 SCGB1D1O95968 90 aa14.08□□□□□ -0.16
CHMP2A-204ENST00000597848 TSPEAR-AS2P59090 65 aa14.08□□□□□ -0.16
CHMP2A-204ENST00000597848 CIRBPQ14011 172 aaKnown RBP14.08□□□□□ -0.16
CHMP2A-204ENST00000597848 SCXQ7RTU7 201 aa14.08□□□□□ -0.16
CHMP2A-204ENST00000597848 PFN2P35080 140 aa14.07□□□□□ -0.16
CHMP2A-204ENST00000597848 CIRBP-AS1Q8TBR5 109 aa14.07□□□□□ -0.16
CHMP2A-204ENST00000597848 MYMXA0A1B0GTQ4 84 aa14.06□□□□□ -0.16
CHMP2A-204ENST00000597848 ERG28Q9UKR5 140 aa14.06□□□□□ -0.16
CHMP2A-204ENST00000597848 A0A087WYN8 130 aa14.05□□□□□ -0.16
CHMP2A-204ENST00000597848 HERV-K104P63124 156 aa14.04□□□□□ -0.16
CHMP2A-204ENST00000597848 NMUP48645 174 aa14.03□□□□□ -0.16
CHMP2A-204ENST00000597848 MEIG1Q5JSS6 88 aa14.02□□□□□ -0.17
CHMP2A-204ENST00000597848 LINC00158P58513 81 aa14.01□□□□□ -0.17
CHMP2A-204ENST00000597848 COX17Q14061 63 aa14.01□□□□□ -0.17
CHMP2A-204ENST00000597848 XAGE1AQ9HD64 81 aa14.01□□□□□ -0.17
CHMP2A-204ENST00000597848 IGKV2D-26A0A0A0MRZ7 120 aa14□□□□□ -0.17
CHMP2A-204ENST00000597848 A0A0U1RRA0 63 aa14□□□□□ -0.17
CHMP2A-204ENST00000597848 HSBP1L1C9JCN9 74 aa14□□□□□ -0.17
CHMP2A-204ENST00000597848 SMR3BP02814 79 aaPredicted RBP14□□□□□ -0.17
CHMP2A-204ENST00000597848 ANKRD39Q53RE8 183 aa14□□□□□ -0.17
CHMP2A-204ENST00000597848 PLAC8Q9NZF1 115 aa14□□□□□ -0.17
CHMP2A-204ENST00000597848 A0A1W2PNN7 141 aa13.98□□□□□ -0.17
CHMP2A-204ENST00000597848 LINC00587B1AMM8 73 aa13.98□□□□□ -0.17
CHMP2A-204ENST00000597848 SMIM13P0DJ93 91 aa13.98□□□□□ -0.17
CHMP2A-204ENST00000597848 C9orf129Q5T035 196 aaKnown RBP13.98□□□□□ -0.17
CHMP2A-204ENST00000597848 KIAA1109Q2LD37 5005 aa13.96□□□□□ -0.17
CHMP2A-204ENST00000597848 FAM168BA1KXE4 195 aa13.96□□□□□ -0.17
CHMP2A-204ENST00000597848 DNAH8Q96JB1 4490 aa13.96□□□□□ -0.18
CHMP2A-204ENST00000597848 ZNF815PA8K554 130 aa13.95□□□□□ -0.18
CHMP2A-204ENST00000597848 FAM19A5Q7Z5A7 132 aaPredicted RBP13.95□□□□□ -0.18
CHMP2A-204ENST00000597848 TTTY13Q9BZ97 58 aa13.95□□□□□ -0.18
CHMP2A-204ENST00000597848 SND1-IT1Q9HBX3 110 aa13.94□□□□□ -0.18
CHMP2A-204ENST00000597848 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-204ENST00000597848 APOBP04114 4563 aaKnown RBP13.92□□□□□ -0.18
CHMP2A-204ENST00000597848 A0A0J9YXY3 114 aa13.92□□□□□ -0.18
CHMP2A-204ENST00000597848 RYR1P21817 5038 aa13.92□□□□□ -0.18
CHMP2A-204ENST00000597848 LINC00528Q8N1L1 170 aa13.91□□□□□ -0.18
CHMP2A-204ENST00000597848 MIR7-3HGQ8N6C7 128 aa13.91□□□□□ -0.18
CHMP2A-204ENST00000597848 EPM2AB3EWF7 344 aa13.89□□□□□ -0.19
CHMP2A-204ENST00000597848 SERTAD4-AS1Q5TG53 156 aa13.89□□□□□ -0.19
CHMP2A-204ENST00000597848 PCP2Q8IVA1 136 aa13.89□□□□□ -0.19
CHMP2A-204ENST00000597848 FAM229AH3BQW9 127 aa13.88□□□□□ -0.19
CHMP2A-204ENST00000597848 KRTAP7-1Q8IUC3 87 aa13.88□□□□□ -0.19
CHMP2A-204ENST00000597848 Q8N1X5 172 aa13.88□□□□□ -0.19
CHMP2A-204ENST00000597848 DAND5Q8N907 189 aa13.88□□□□□ -0.19
CHMP2A-204ENST00000597848 C7orf33Q8WU49 177 aa13.88□□□□□ -0.19
CHMP2A-204ENST00000597848 SCGB1D4Q6XE38 83 aa13.87□□□□□ -0.19
CHMP2A-204ENST00000597848 PHF5AQ7RTV0 110 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-204ENST00000597848 M0QXV9 152 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms