RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
IRF3-216ENST00000597180 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
IRF3-216ENST00000597180 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
IRF3-216ENST00000597180 H3BRM9 83 aa11.44□□□□□ -0.58
IRF3-216ENST00000597180 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
IRF3-216ENST00000597180 STPG4Q8N801 248 aa11.44□□□□□ -0.58
IRF3-216ENST00000597180 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
IRF3-216ENST00000597180 NUPR1O60356 82 aa11.43□□□□□ -0.58
IRF3-216ENST00000597180 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
IRF3-216ENST00000597180 CKS1BP61024 79 aa11.43□□□□□ -0.58
IRF3-216ENST00000597180 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BKO60814 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BJP06899 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 S100A1P23297 94 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BOP23527 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BBP33778 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 CXCL5P42830 114 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BDP58876 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BCP62807 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST2H2BEQ16778 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BHQ93079 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BNQ99877 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 HIST1H2BMQ99879 126 aa11.42□□□□□ -0.58
IRF3-216ENST00000597180 CHTOPQ9Y3Y2 248 aaKnown RBP11.42□□□□□ -0.58
IRF3-216ENST00000597180 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
IRF3-216ENST00000597180 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
IRF3-216ENST00000597180 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
IRF3-216ENST00000597180 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
IRF3-216ENST00000597180 Q6ZRP5 223 aa11.4□□□□□ -0.58
IRF3-216ENST00000597180 ABCA13Q86UQ4 5058 aa11.39□□□□□ -0.59
IRF3-216ENST00000597180 F8VRH5 84 aa11.39□□□□□ -0.59
IRF3-216ENST00000597180 ATP6V1G1O75348 118 aa11.39□□□□□ -0.59
IRF3-216ENST00000597180 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
IRF3-216ENST00000597180 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
IRF3-216ENST00000597180 NDUFC2-KCTD14E9PQ53 114 aa11.38□□□□□ -0.59
IRF3-216ENST00000597180 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
IRF3-216ENST00000597180 C9orf116Q5BN46 136 aaPredicted RBP11.38□□□□□ -0.59
IRF3-216ENST00000597180 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
IRF3-216ENST00000597180 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
IRF3-216ENST00000597180 A0A1W2PNN7 141 aa11.36□□□□□ -0.59
IRF3-216ENST00000597180 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
IRF3-216ENST00000597180 ODF1Q14990 250 aa11.35□□□□□ -0.59
IRF3-216ENST00000597180 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
IRF3-216ENST00000597180 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
IRF3-216ENST00000597180 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
IRF3-216ENST00000597180 FABP4P15090 132 aa11.33□□□□□ -0.6
IRF3-216ENST00000597180 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
IRF3-216ENST00000597180 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
IRF3-216ENST00000597180 H0Y8G0 127 aa11.31□□□□□ -0.6
IRF3-216ENST00000597180 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
IRF3-216ENST00000597180 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
IRF3-216ENST00000597180 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
IRF3-216ENST00000597180 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
IRF3-216ENST00000597180 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
IRF3-216ENST00000597180 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
IRF3-216ENST00000597180 PLNP26678 52 aa11.27□□□□□ -0.61
IRF3-216ENST00000597180 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.61
IRF3-216ENST00000597180 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
IRF3-216ENST00000597180 PHF5AQ7RTV0 110 aaKnown RBP11.26□□□□□ -0.61
IRF3-216ENST00000597180 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
IRF3-216ENST00000597180 ZNF625Q96I27 306 aaPredicted RBP11.26□□□□□ -0.61
IRF3-216ENST00000597180 XAGE1AQ9HD64 81 aa11.26□□□□□ -0.61
IRF3-216ENST00000597180 DPM2O94777 84 aa11.25□□□□□ -0.61
IRF3-216ENST00000597180 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
IRF3-216ENST00000597180 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
IRF3-216ENST00000597180 IGKCP01834 107 aa11.23□□□□□ -0.61
IRF3-216ENST00000597180 COX17Q14061 63 aa11.23□□□□□ -0.61
IRF3-216ENST00000597180 PMCHL2Q9BQD1 86 aa11.23□□□□□ -0.61
IRF3-216ENST00000597180 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
IRF3-216ENST00000597180 M0QXV9 152 aa11.22□□□□□ -0.61
IRF3-216ENST00000597180 SERTAD4-AS1Q5TG53 156 aa11.22□□□□□ -0.61
IRF3-216ENST00000597180 PFN2P35080 140 aa11.21□□□□□ -0.61
IRF3-216ENST00000597180 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
IRF3-216ENST00000597180 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
IRF3-216ENST00000597180 LEPROTO15243 131 aa11.19□□□□□ -0.62
IRF3-216ENST00000597180 HERVK_113P61574 105 aa11.19□□□□□ -0.62
IRF3-216ENST00000597180 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
IRF3-216ENST00000597180 PET117Q6UWS5 81 aa11.19□□□□□ -0.62
IRF3-216ENST00000597180 KRTAP11-1Q8IUC1 163 aa11.18□□□□□ -0.62
IRF3-216ENST00000597180 PLEKHB2Q96CS7 222 aa11.18□□□□□ -0.62
IRF3-216ENST00000597180 TP73-AS1Q9UF72 201 aa11.18□□□□□ -0.62
IRF3-216ENST00000597180 C22orf24Q9Y442 160 aa11.18□□□□□ -0.62
IRF3-216ENST00000597180 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
IRF3-216ENST00000597180 C3orf79P0CE67 100 aa11.17□□□□□ -0.62
IRF3-216ENST00000597180 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
IRF3-216ENST00000597180 HERV-K104P63124 156 aa11.17□□□□□ -0.62
IRF3-216ENST00000597180 SND1-IT1Q9HBX3 110 aa11.17□□□□□ -0.62
IRF3-216ENST00000597180 NDUFA12Q9UI09 145 aa11.17□□□□□ -0.62
IRF3-216ENST00000597180 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
IRF3-216ENST00000597180 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
IRF3-216ENST00000597180 MYMXA0A1B0GTQ4 84 aa11.15□□□□□ -0.62
IRF3-216ENST00000597180 J3QQQ9 107 aa11.14□□□□□ -0.63
IRF3-216ENST00000597180 UBE2BP63146 152 aa11.14□□□□□ -0.63
IRF3-216ENST00000597180 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
IRF3-216ENST00000597180 LBHQ53QV2 105 aaPredicted RBP11.14□□□□□ -0.63
IRF3-216ENST00000597180 C1orf137Q5JT78 98 aa11.14□□□□□ -0.63
IRF3-216ENST00000597180 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms