RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 IGKV2D-28P01615 120 aa15.63■□□□□ 0.09
SRRM1-222ENST00000596378 MT-ATP8P03928 68 aa15.63■□□□□ 0.09
SRRM1-222ENST00000596378 C6orf226Q5I0X4 101 aa15.63■□□□□ 0.09
SRRM1-222ENST00000596378 LINC00337Q8N6G1 96 aa15.63■□□□□ 0.09
SRRM1-222ENST00000596378 UBE2WQ96B02 151 aa15.63■□□□□ 0.09
SRRM1-222ENST00000596378 CCL18P55774 89 aa15.62■□□□□ 0.09
SRRM1-222ENST00000596378 WFDC9Q8NEX5 89 aa15.62■□□□□ 0.09
SRRM1-222ENST00000596378 IGLV10-54A0A075B6I4 117 aa15.62■□□□□ 0.09
SRRM1-222ENST00000596378 H3BT86 120 aa15.62■□□□□ 0.09
SRRM1-222ENST00000596378 ATP5G1P05496 136 aa15.62■□□□□ 0.09
SRRM1-222ENST00000596378 MIFP14174 115 aa15.61■□□□□ 0.09
SRRM1-222ENST00000596378 IBA57-AS1B1ANH7 110 aa15.61■□□□□ 0.09
SRRM1-222ENST00000596378 PPDPFQ9H3Y8 114 aa15.6■□□□□ 0.09
SRRM1-222ENST00000596378 CRPP02741 224 aa15.6■□□□□ 0.09
SRRM1-222ENST00000596378 ANGP03950 147 aaKnown RBP15.6■□□□□ 0.09
SRRM1-222ENST00000596378 FAM218AQ96MZ4 157 aa15.59■□□□□ 0.09
SRRM1-222ENST00000596378 F8P00451 2351 aa15.58■□□□□ 0.08
SRRM1-222ENST00000596378 SPART-AS1P0CW21 52 aa15.57■□□□□ 0.08
SRRM1-222ENST00000596378 SCGB1A1P11684 91 aa15.57■□□□□ 0.08
SRRM1-222ENST00000596378 TRAV13-2A0A0B4J235 113 aa15.57■□□□□ 0.08
SRRM1-222ENST00000596378 CHCHD10Q8WYQ3 142 aaPredicted RBP15.56■□□□□ 0.08
SRRM1-222ENST00000596378 REG3AQ06141 175 aa15.56■□□□□ 0.08
SRRM1-222ENST00000596378 OXLD1Q5BKU9 147 aa15.56■□□□□ 0.08
SRRM1-222ENST00000596378 Q8IZM0 81 aa15.55■□□□□ 0.08
SRRM1-222ENST00000596378 WIPF1O43516 503 aa15.54■□□□□ 0.08
SRRM1-222ENST00000596378 CD164L2Q6UWJ8 174 aa15.53■□□□□ 0.08
SRRM1-222ENST00000596378 ANK2Q01484 3957 aa15.53■□□□□ 0.08
SRRM1-222ENST00000596378 TRAV8-4A0A0B4J246 113 aa15.52■□□□□ 0.08
SRRM1-222ENST00000596378 RPL28P46779 137 aaKnown RBP15.52■□□□□ 0.08
SRRM1-222ENST00000596378 SMIM11BQ8TCY0 68 aa15.52■□□□□ 0.07
SRRM1-222ENST00000596378 RETNQ9HD89 108 aa15.52■□□□□ 0.07
SRRM1-222ENST00000596378 MRPL23Q16540 153 aaKnown RBP15.51■□□□□ 0.07
SRRM1-222ENST00000596378 KIAA0087Q14695 138 aa15.51■□□□□ 0.07
SRRM1-222ENST00000596378 PKD1L1Q8TDX9 2849 aa15.5■□□□□ 0.07
SRRM1-222ENST00000596378 CKS1BP61024 79 aa15.5■□□□□ 0.07
SRRM1-222ENST00000596378 KRTAP10-11P60412 298 aa15.49■□□□□ 0.07
SRRM1-222ENST00000596378 FLNBO75369 2602 aaKnown RBP15.49■□□□□ 0.07
SRRM1-222ENST00000596378 TRACP01848 142 aa15.49■□□□□ 0.07
SRRM1-222ENST00000596378 MALP21145 153 aa15.49■□□□□ 0.07
SRRM1-222ENST00000596378 Q9HAA7 133 aa15.49■□□□□ 0.07
SRRM1-222ENST00000596378 CMYA5Q8N3K9 4069 aa15.48■□□□□ 0.07
SRRM1-222ENST00000596378 LINC01561Q8N1V8 128 aa15.48■□□□□ 0.07
SRRM1-222ENST00000596378 OR13C6PQ8NH95 151 aa15.48■□□□□ 0.07
SRRM1-222ENST00000596378 C9orf116Q5BN46 136 aaPredicted RBP15.47■□□□□ 0.07
SRRM1-222ENST00000596378 FBN1P35555 2871 aaKnown RBP15.47■□□□□ 0.07
SRRM1-222ENST00000596378 LELP1Q5T871 98 aa15.46■□□□□ 0.07
SRRM1-222ENST00000596378 CFAP161Q6P656 301 aa15.46■□□□□ 0.07
SRRM1-222ENST00000596378 A0A087WYN8 130 aa15.45■□□□□ 0.06
SRRM1-222ENST00000596378 BAALC-AS2P0C853 105 aa15.45■□□□□ 0.06
SRRM1-222ENST00000596378 PRR3P79522 188 aaKnown RBP15.45■□□□□ 0.06
SRRM1-222ENST00000596378 STAB1Q9NY15 2570 aa15.44■□□□□ 0.06
SRRM1-222ENST00000596378 KLK12Q9UKR0 248 aa15.44■□□□□ 0.06
SRRM1-222ENST00000596378 C22orf24Q9Y442 160 aa15.44■□□□□ 0.06
SRRM1-222ENST00000596378 DEFB121Q5J5C9 76 aa15.44■□□□□ 0.06
SRRM1-222ENST00000596378 LINC00526Q96FQ7 95 aa15.43■□□□□ 0.06
SRRM1-222ENST00000596378 KRTAP24-1Q3LI83 254 aa15.42■□□□□ 0.06
SRRM1-222ENST00000596378 C6orf223Q8N319 242 aa15.42■□□□□ 0.06
SRRM1-222ENST00000596378 LYPD5Q6UWN5 251 aa15.4■□□□□ 0.06
SRRM1-222ENST00000596378 TENM3Q9P273 2699 aa15.39■□□□□ 0.05
SRRM1-222ENST00000596378 C10orf25Q5T742 122 aa15.39■□□□□ 0.05
SRRM1-222ENST00000596378 CXCL5P42830 114 aa15.38■□□□□ 0.05
SRRM1-222ENST00000596378 ENHOQ6UWT2 76 aa15.38■□□□□ 0.05
SRRM1-222ENST00000596378 C15orf53Q8NAA6 179 aa15.38■□□□□ 0.05
SRRM1-222ENST00000596378 SNCGO76070 127 aa15.37■□□□□ 0.05
SRRM1-222ENST00000596378 TTC32Q5I0X7 151 aa15.37■□□□□ 0.05
SRRM1-222ENST00000596378 UNQ6190/PRO20217Q6UXQ8 127 aa15.37■□□□□ 0.05
SRRM1-222ENST00000596378 PRR34Q9NV39 138 aa15.37■□□□□ 0.05
SRRM1-222ENST00000596378 SPAG11BQ08648 103 aa15.36■□□□□ 0.05
SRRM1-222ENST00000596378 Q8NDZ9 215 aa15.36■□□□□ 0.05
SRRM1-222ENST00000596378 Q6ZTC4 211 aa15.35■□□□□ 0.05
SRRM1-222ENST00000596378 LECT2O14960 151 aa15.35■□□□□ 0.05
SRRM1-222ENST00000596378 COX17Q14061 63 aa15.35■□□□□ 0.05
SRRM1-222ENST00000596378 DNAL4O96015 105 aa15.34■□□□□ 0.05
SRRM1-222ENST00000596378 H0YGX0 51 aa15.34■□□□□ 0.05
SRRM1-222ENST00000596378 NANOS2P60321 138 aaKnown RBP15.34■□□□□ 0.05
SRRM1-222ENST00000596378 KPRPQ5T749 579 aaPredicted RBP15.34■□□□□ 0.05
SRRM1-222ENST00000596378 WFDC10BQ8IUB3 73 aa15.34■□□□□ 0.05
SRRM1-222ENST00000596378 FAM240AA0A1B0GVK7 77 aa15.33■□□□□ 0.05
SRRM1-222ENST00000596378 KLK5Q9Y337 293 aaPredicted RBP15.33■□□□□ 0.05
SRRM1-222ENST00000596378 MAST4O15021 2626 aa15.32■□□□□ 0.04
SRRM1-222ENST00000596378 SLPIP03973 132 aa15.32■□□□□ 0.04
SRRM1-222ENST00000596378 C9orf129Q5T035 196 aaKnown RBP15.32■□□□□ 0.04
SRRM1-222ENST00000596378 CYSRT1A8MQ03 144 aa15.31■□□□□ 0.04
SRRM1-222ENST00000596378 NCR3O14931 201 aa15.31■□□□□ 0.04
SRRM1-222ENST00000596378 C3orf56Q8N813 242 aa15.31■□□□□ 0.04
SRRM1-222ENST00000596378 EGFEM1PQ0D2K5 195 aa15.3■□□□□ 0.04
SRRM1-222ENST00000596378 A0A1B0GV72 72 aa15.29■□□□□ 0.04
SRRM1-222ENST00000596378 NDUFC2O95298 119 aa15.28■□□□□ 0.04
SRRM1-222ENST00000596378 GAGE2BQ13066 116 aa15.28■□□□□ 0.04
SRRM1-222ENST00000596378 GAGE2EQ4V326 116 aa15.28■□□□□ 0.04
SRRM1-222ENST00000596378 GAGE2DQ9UEU5 116 aa15.28■□□□□ 0.04
SRRM1-222ENST00000596378 DNAH3Q8TD57 4116 aa15.27■□□□□ 0.04
SRRM1-222ENST00000596378 A0A0J9YWU9 116 aa15.26■□□□□ 0.03
SRRM1-222ENST00000596378 NOTCH1P46531 2555 aa15.25■□□□□ 0.03
SRRM1-222ENST00000596378 SMCR5Q8TEV8 140 aa15.24■□□□□ 0.03
SRRM1-222ENST00000596378 TMEM126AQ9H061 195 aa15.24■□□□□ 0.03
SRRM1-222ENST00000596378 H3BNG1 76 aa15.22■□□□□ 0.03
SRRM1-222ENST00000596378 ESRGQ1W209 222 aa15.22■□□□□ 0.03
SRRM1-222ENST00000596378 GAGE2AQ6NT46 116 aa15.22■□□□□ 0.03
SRRM1-222ENST00000596378 INAFM2P0DMQ5 153 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms