RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 FAM19A3Q7Z5A8 133 aa5.79□□□□□ -1.48
LIG1-209ENST00000596104 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
LIG1-209ENST00000596104 ALKBH7Q9BT30 221 aaPredicted RBP5.79□□□□□ -1.48
LIG1-209ENST00000596104 F8VRH5 84 aa5.78□□□□□ -1.48
LIG1-209ENST00000596104 AKAP14Q86UN6 197 aa5.78□□□□□ -1.48
LIG1-209ENST00000596104 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
LIG1-209ENST00000596104 VCX2Q9H322 139 aa5.78□□□□□ -1.48
LIG1-209ENST00000596104 CYSLTR1Q9Y271 337 aa5.78□□□□□ -1.48
LIG1-209ENST00000596104 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
LIG1-209ENST00000596104 LOC389332A0A1B0GUA5 103 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 IGIPA6NJ69 53 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 RPL37AP8A6NKH3 93 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 NPSP0C0P6 89 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 SRSF3P84103 164 aaKnown RBP5.77□□□□□ -1.49
LIG1-209ENST00000596104 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 ATP5L2Q7Z4Y8 100 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 LINC00304Q8N9R0 145 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 CDKN2A-AS1Q9UH64 79 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 LAMTOR2Q9Y2Q5 125 aa5.77□□□□□ -1.49
LIG1-209ENST00000596104 Q8N8P6 123 aa5.76□□□□□ -1.49
LIG1-209ENST00000596104 MAP1LC3AQ9H492 121 aa5.76□□□□□ -1.49
LIG1-209ENST00000596104 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
LIG1-209ENST00000596104 IGLV5-37A0A075B6J1 123 aa5.75□□□□□ -1.49
LIG1-209ENST00000596104 GAGE10A6NGK3 116 aa5.75□□□□□ -1.49
LIG1-209ENST00000596104 CXCL5P42830 114 aa5.75□□□□□ -1.49
LIG1-209ENST00000596104 HERVK_113P63121 156 aa5.75□□□□□ -1.49
LIG1-209ENST00000596104 SEC11AP67812 179 aa5.74□□□□□ -1.49
LIG1-209ENST00000596104 CTAG1AP78358 180 aa5.74□□□□□ -1.49
LIG1-209ENST00000596104 ORMDL2Q53FV1 153 aa5.74□□□□□ -1.49
LIG1-209ENST00000596104 SMIM1B2RUZ4 78 aa5.73□□□□□ -1.49
LIG1-209ENST00000596104 UBE2AP49459 152 aa5.73□□□□□ -1.49
LIG1-209ENST00000596104 PEA15Q15121 130 aa5.73□□□□□ -1.49
LIG1-209ENST00000596104 GEMIN7Q9H840 131 aaKnown RBP5.73□□□□□ -1.49
LIG1-209ENST00000596104 hCG_2014768A0A024R1R8 64 aa5.72□□□□□ -1.49
LIG1-209ENST00000596104 IGKV2D-26A0A0A0MRZ7 120 aa5.72□□□□□ -1.49
LIG1-209ENST00000596104 K7EMI3 77 aa5.72□□□□□ -1.49
LIG1-209ENST00000596104 PNRC1Q12796 327 aaPredicted RBP5.72□□□□□ -1.49
LIG1-209ENST00000596104 PAPPA-AS1Q5QFB9 102 aa5.72□□□□□ -1.49
LIG1-209ENST00000596104 TIMM17AQ99595 171 aa5.72□□□□□ -1.49
LIG1-209ENST00000596104 IGLV5-45A0A087WSX0 123 aa5.71□□□□□ -1.5
LIG1-209ENST00000596104 SCO1O75880 301 aa5.71□□□□□ -1.5
LIG1-209ENST00000596104 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.5
LIG1-209ENST00000596104 COX7B2Q8TF08 81 aa5.71□□□□□ -1.5
LIG1-209ENST00000596104 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.5
LIG1-209ENST00000596104 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
LIG1-209ENST00000596104 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
LIG1-209ENST00000596104 PRLHP81277 87 aa5.7□□□□□ -1.5
LIG1-209ENST00000596104 NKAPP1Q8N9T2 125 aa5.7□□□□□ -1.5
LIG1-209ENST00000596104 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
LIG1-209ENST00000596104 NXT2Q9NPJ8 142 aaKnown RBP5.7□□□□□ -1.5
LIG1-209ENST00000596104 TINCRA0A1B0GVN0 87 aa5.69□□□□□ -1.5
LIG1-209ENST00000596104 RAB5BP61020 215 aa5.69□□□□□ -1.5
LIG1-209ENST00000596104 C3orf22Q8N5N4 141 aa5.69□□□□□ -1.5
LIG1-209ENST00000596104 G0S2P27469 103 aa5.68□□□□□ -1.5
LIG1-209ENST00000596104 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
LIG1-209ENST00000596104 ERASQ7Z444 233 aa5.68□□□□□ -1.5
LIG1-209ENST00000596104 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
LIG1-209ENST00000596104 TMEM126AQ9H061 195 aa5.68□□□□□ -1.5
LIG1-209ENST00000596104 TMEM238C9JI98 176 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 M0R378 163 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 SPINK8P0C7L1 97 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 VPREB1P12018 145 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 ADCYAP1P18509 176 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 SCGB3A1Q96QR1 104 aa5.67□□□□□ -1.5
LIG1-209ENST00000596104 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
LIG1-209ENST00000596104 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
LIG1-209ENST00000596104 SPAG11AQ6PDA7 123 aa5.66□□□□□ -1.5
LIG1-209ENST00000596104 FP248Q71RG6 208 aaPredicted RBP5.66□□□□□ -1.5
LIG1-209ENST00000596104 KRTAP4-1Q9BYQ7 146 aa5.66□□□□□ -1.5
LIG1-209ENST00000596104 ATP5LO75964 103 aa5.65□□□□□ -1.5
LIG1-209ENST00000596104 Q8NDZ9 215 aa5.65□□□□□ -1.5
LIG1-209ENST00000596104 ANAPC16Q96DE5 110 aa5.65□□□□□ -1.5
LIG1-209ENST00000596104 CST9LQ9H4G1 147 aa5.65□□□□□ -1.5
LIG1-209ENST00000596104 SND1-IT1Q9HBX3 110 aa5.65□□□□□ -1.5
LIG1-209ENST00000596104 MT-ND4LP03901 98 aa5.64□□□□□ -1.51
LIG1-209ENST00000596104 PFN2P35080 140 aa5.64□□□□□ -1.51
LIG1-209ENST00000596104 MRPL18Q9H0U6 180 aaKnown RBP5.64□□□□□ -1.51
LIG1-209ENST00000596104 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
LIG1-209ENST00000596104 LINC01546A6NGU7 62 aa5.63□□□□□ -1.51
LIG1-209ENST00000596104 LINC01547P58512 204 aaPredicted RBP5.63□□□□□ -1.51
LIG1-209ENST00000596104 KIAA1644Q3SXP7 199 aa5.63□□□□□ -1.51
LIG1-209ENST00000596104 CBLN2Q8IUK8 224 aa5.63□□□□□ -1.51
LIG1-209ENST00000596104 SPRR4Q96PI1 79 aa5.63□□□□□ -1.51
LIG1-209ENST00000596104 GNB1LQ9BYB4 327 aa5.63□□□□□ -1.51
LIG1-209ENST00000596104 LINC01549A6NIU2 74 aa5.62□□□□□ -1.51
LIG1-209ENST00000596104 RPL24P83731 157 aaKnown RBP5.62□□□□□ -1.51
LIG1-209ENST00000596104 PMVKQ15126 192 aa5.62□□□□□ -1.51
LIG1-209ENST00000596104 HIGD2AQ9BW72 106 aa5.62□□□□□ -1.51
LIG1-209ENST00000596104 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
LIG1-209ENST00000596104 ERG28Q9UKR5 140 aa5.62□□□□□ -1.51
LIG1-209ENST00000596104 H3BRM9 83 aa5.61□□□□□ -1.51
LIG1-209ENST00000596104 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
LIG1-209ENST00000596104 IGLC3P0DOY3 106 aa5.6□□□□□ -1.51
LIG1-209ENST00000596104 RAB14P61106 215 aa5.6□□□□□ -1.51
LIG1-209ENST00000596104 COX17Q14061 63 aa5.6□□□□□ -1.51
LIG1-209ENST00000596104 DAND5Q8N907 189 aa5.6□□□□□ -1.51
LIG1-209ENST00000596104 Q8NBF4 154 aa5.6□□□□□ -1.51
LIG1-209ENST00000596104 A0A1B0GVG6 124 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms