RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CIRBP-AS1Q8TBR5 109 aa9.17□□□□□ -0.94
LIG1-208ENST00000595758 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
LIG1-208ENST00000595758 LOC107984640A0A0U1RRK4 108 aa9.16□□□□□ -0.94
LIG1-208ENST00000595758 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
LIG1-208ENST00000595758 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
LIG1-208ENST00000595758 CKS1BP61024 79 aa9.16□□□□□ -0.94
LIG1-208ENST00000595758 CIRBPQ14011 172 aaKnown RBP9.16□□□□□ -0.94
LIG1-208ENST00000595758 C2orf82Q6UX34 121 aa9.16□□□□□ -0.94
LIG1-208ENST00000595758 KRTAP17-1Q9BYP8 105 aa9.16□□□□□ -0.94
LIG1-208ENST00000595758 A0A096LNI7 61 aa9.15□□□□□ -0.94
LIG1-208ENST00000595758 H0Y8G0 127 aa9.15□□□□□ -0.94
LIG1-208ENST00000595758 MAJINQ3KP22 176 aa9.15□□□□□ -0.94
LIG1-208ENST00000595758 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
LIG1-208ENST00000595758 C6orf48Q9UBA6 75 aa9.15□□□□□ -0.94
LIG1-208ENST00000595758 F8VRH5 84 aa9.14□□□□□ -0.95
LIG1-208ENST00000595758 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
LIG1-208ENST00000595758 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
LIG1-208ENST00000595758 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
LIG1-208ENST00000595758 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
LIG1-208ENST00000595758 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
LIG1-208ENST00000595758 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
LIG1-208ENST00000595758 A0A087WYN8 130 aa9.12□□□□□ -0.95
LIG1-208ENST00000595758 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
LIG1-208ENST00000595758 CXCL5P42830 114 aa9.12□□□□□ -0.95
LIG1-208ENST00000595758 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
LIG1-208ENST00000595758 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
LIG1-208ENST00000595758 ODF1Q14990 250 aa9.12□□□□□ -0.95
LIG1-208ENST00000595758 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
LIG1-208ENST00000595758 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
LIG1-208ENST00000595758 MAP1LC3CQ9BXW4 147 aa9.11□□□□□ -0.95
LIG1-208ENST00000595758 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
LIG1-208ENST00000595758 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
LIG1-208ENST00000595758 C9orf116Q5BN46 136 aaPredicted RBP9.1□□□□□ -0.95
LIG1-208ENST00000595758 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
LIG1-208ENST00000595758 STPG4Q8N801 248 aa9.1□□□□□ -0.95
LIG1-208ENST00000595758 Q5VSD8 79 aa9.09□□□□□ -0.95
LIG1-208ENST00000595758 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
LIG1-208ENST00000595758 FAT1Q14517 4588 aa9.09□□□□□ -0.96
LIG1-208ENST00000595758 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
LIG1-208ENST00000595758 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
LIG1-208ENST00000595758 PLNP26678 52 aa9.08□□□□□ -0.96
LIG1-208ENST00000595758 Q6ZRP5 223 aa9.08□□□□□ -0.96
LIG1-208ENST00000595758 DPM2O94777 84 aa9.07□□□□□ -0.96
LIG1-208ENST00000595758 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
LIG1-208ENST00000595758 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
LIG1-208ENST00000595758 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
LIG1-208ENST00000595758 SYS1-DBNDD2H3BUS1 97 aa9.06□□□□□ -0.96
LIG1-208ENST00000595758 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
LIG1-208ENST00000595758 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
LIG1-208ENST00000595758 A0A1W2PNN7 141 aa9.04□□□□□ -0.96
LIG1-208ENST00000595758 IGKCP01834 107 aa9.04□□□□□ -0.96
LIG1-208ENST00000595758 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
LIG1-208ENST00000595758 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
LIG1-208ENST00000595758 PCLOQ9Y6V0 5065 aa9.03□□□□□ -0.96
LIG1-208ENST00000595758 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
LIG1-208ENST00000595758 C3orf79P0CE67 100 aa9.02□□□□□ -0.97
LIG1-208ENST00000595758 KRTDAPP60985 99 aa9.02□□□□□ -0.97
LIG1-208ENST00000595758 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
LIG1-208ENST00000595758 SRRM2Q9UQ35 2752 aaKnown RBP9.02□□□□□ -0.97
LIG1-208ENST00000595758 S100A6P06703 90 aa9.01□□□□□ -0.97
LIG1-208ENST00000595758 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
LIG1-208ENST00000595758 HERVK_113P61574 105 aa9.01□□□□□ -0.97
LIG1-208ENST00000595758 C9orf129Q5T035 196 aaKnown RBP9.01□□□□□ -0.97
LIG1-208ENST00000595758 LINC01545Q5VT33 79 aa9.01□□□□□ -0.97
LIG1-208ENST00000595758 ZNF625Q96I27 306 aaPredicted RBP9.01□□□□□ -0.97
LIG1-208ENST00000595758 FAM168BA1KXE4 195 aa9□□□□□ -0.97
LIG1-208ENST00000595758 PFN2P35080 140 aa9□□□□□ -0.97
LIG1-208ENST00000595758 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
LIG1-208ENST00000595758 ERG28Q9UKR5 140 aa9□□□□□ -0.97
LIG1-208ENST00000595758 LEPROTO15243 131 aa8.99□□□□□ -0.97
LIG1-208ENST00000595758 S100A2P29034 98 aa8.99□□□□□ -0.97
LIG1-208ENST00000595758 FAM19A5Q7Z5A7 132 aaPredicted RBP8.99□□□□□ -0.97
LIG1-208ENST00000595758 HIST3H2BBQ8N257 126 aa8.99□□□□□ -0.97
LIG1-208ENST00000595758 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
LIG1-208ENST00000595758 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
LIG1-208ENST00000595758 COX17Q14061 63 aa8.98□□□□□ -0.97
LIG1-208ENST00000595758 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
LIG1-208ENST00000595758 C20orf202A1L168 122 aa8.97□□□□□ -0.97
LIG1-208ENST00000595758 KRTAP10-4P60372 401 aaPredicted RBP8.97□□□□□ -0.97
LIG1-208ENST00000595758 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
LIG1-208ENST00000595758 MYMXA0A1B0GTQ4 84 aa8.96□□□□□ -0.98
LIG1-208ENST00000595758 J3QQQ9 107 aa8.96□□□□□ -0.98
LIG1-208ENST00000595758 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
LIG1-208ENST00000595758 HERV-K104P63124 156 aa8.96□□□□□ -0.98
LIG1-208ENST00000595758 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.98
LIG1-208ENST00000595758 HIST1H2BLQ99880 126 aa8.96□□□□□ -0.98
LIG1-208ENST00000595758 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
LIG1-208ENST00000595758 LINC00158P58513 81 aa8.95□□□□□ -0.98
LIG1-208ENST00000595758 SNRPEP62304 92 aaKnown RBP8.95□□□□□ -0.98
LIG1-208ENST00000595758 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
LIG1-208ENST00000595758 E9PLD3 99 aa8.94□□□□□ -0.98
LIG1-208ENST00000595758 M0QXV9 152 aa8.94□□□□□ -0.98
LIG1-208ENST00000595758 SND1-IT1Q9HBX3 110 aa8.94□□□□□ -0.98
LIG1-208ENST00000595758 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
LIG1-208ENST00000595758 LINC00587B1AMM8 73 aa8.93□□□□□ -0.98
LIG1-208ENST00000595758 NMUP48645 174 aa8.93□□□□□ -0.98
LIG1-208ENST00000595758 MEIG1Q5JSS6 88 aa8.93□□□□□ -0.98
LIG1-208ENST00000595758 C5orf52A6NGY3 159 aa8.92□□□□□ -0.98
LIG1-208ENST00000595758 SMIM13P0DJ93 91 aa8.92□□□□□ -0.98
LIG1-208ENST00000595758 AKR1D1P51857 326 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms