RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 PRSS2P07478 247 aa10.91□□□□□ -0.66
CIRBP-244ENST00000593283 PACRGQ96M98 296 aaPredicted RBP10.91□□□□□ -0.66
CIRBP-244ENST00000593283 SCGB3A1Q96QR1 104 aa10.91□□□□□ -0.66
CIRBP-244ENST00000593283 LINC01546A6NGU7 62 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 HERVK_113P63121 156 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 SEC11AP67812 179 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 COX19Q49B96 90 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 REG3GQ6UW15 175 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 ERASQ7Z444 233 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
CIRBP-244ENST00000593283 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
CIRBP-244ENST00000593283 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
CIRBP-244ENST00000593283 COLCA2A8K830 154 aa10.89□□□□□ -0.67
CIRBP-244ENST00000593283 NDUFC2-KCTD14E9PQ53 114 aa10.89□□□□□ -0.67
CIRBP-244ENST00000593283 Q8IZM0 81 aa10.89□□□□□ -0.67
CIRBP-244ENST00000593283 CKS1BP61024 79 aa10.88□□□□□ -0.67
CIRBP-244ENST00000593283 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
CIRBP-244ENST00000593283 C1orf137Q5JT78 98 aa10.88□□□□□ -0.67
CIRBP-244ENST00000593283 KRTAP7-1Q8IUC3 87 aa10.88□□□□□ -0.67
CIRBP-244ENST00000593283 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
CIRBP-244ENST00000593283 KRTAP11-1Q8IUC1 163 aa10.87□□□□□ -0.67
CIRBP-244ENST00000593283 LINC00469Q8N7U9 141 aa10.87□□□□□ -0.67
CIRBP-244ENST00000593283 TNXBP22105 4242 aa10.86□□□□□ -0.67
CIRBP-244ENST00000593283 M0QXV9 152 aa10.86□□□□□ -0.67
CIRBP-244ENST00000593283 C6orf226Q5I0X4 101 aa10.86□□□□□ -0.67
CIRBP-244ENST00000593283 C9orf129Q5T035 196 aaKnown RBP10.86□□□□□ -0.67
CIRBP-244ENST00000593283 ODF1Q14990 250 aa10.85□□□□□ -0.67
CIRBP-244ENST00000593283 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
CIRBP-244ENST00000593283 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
CIRBP-244ENST00000593283 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
CIRBP-244ENST00000593283 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
CIRBP-244ENST00000593283 IGLV5-45A0A087WSX0 123 aa10.82□□□□□ -0.68
CIRBP-244ENST00000593283 F8VRH5 84 aa10.82□□□□□ -0.68
CIRBP-244ENST00000593283 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
CIRBP-244ENST00000593283 TRAPPC1Q9Y5R8 145 aa10.82□□□□□ -0.68
CIRBP-244ENST00000593283 CXCL5P42830 114 aa10.81□□□□□ -0.68
CIRBP-244ENST00000593283 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
CIRBP-244ENST00000593283 UBE2BP63146 152 aa10.81□□□□□ -0.68
CIRBP-244ENST00000593283 PMVKQ15126 192 aa10.8□□□□□ -0.68
CIRBP-244ENST00000593283 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
CIRBP-244ENST00000593283 COX7B2Q8TF08 81 aa10.8□□□□□ -0.68
CIRBP-244ENST00000593283 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
CIRBP-244ENST00000593283 A0A096LNJ9 63 aa10.79□□□□□ -0.68
CIRBP-244ENST00000593283 SPINK8P0C7L1 97 aa10.79□□□□□ -0.68
CIRBP-244ENST00000593283 C18orf32Q8TCD1 76 aa10.79□□□□□ -0.68
CIRBP-244ENST00000593283 URB1-AS1Q96HZ7 61 aa10.79□□□□□ -0.68
CIRBP-244ENST00000593283 TRGC2P03986 189 aa10.78□□□□□ -0.68
CIRBP-244ENST00000593283 DIRC1Q969H9 104 aa10.78□□□□□ -0.68
CIRBP-244ENST00000593283 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
CIRBP-244ENST00000593283 H0Y9J4 135 aa10.75□□□□□ -0.69
CIRBP-244ENST00000593283 HBDP02042 147 aa10.75□□□□□ -0.69
CIRBP-244ENST00000593283 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
CIRBP-244ENST00000593283 NDUFA6P56556 154 aa10.75□□□□□ -0.69
CIRBP-244ENST00000593283 H3BRM9 83 aa10.74□□□□□ -0.69
CIRBP-244ENST00000593283 LINC00614P0C842 121 aa10.74□□□□□ -0.69
CIRBP-244ENST00000593283 C22orf24Q9Y442 160 aa10.74□□□□□ -0.69
CIRBP-244ENST00000593283 UBR4Q5T4S7 5183 aa10.74□□□□□ -0.69
CIRBP-244ENST00000593283 ZNF22P17026 224 aaPredicted RBP10.71□□□□□ -0.69
CIRBP-244ENST00000593283 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
CIRBP-244ENST00000593283 RAB5BP61020 215 aa10.7□□□□□ -0.7
CIRBP-244ENST00000593283 LBHQ53QV2 105 aaPredicted RBP10.7□□□□□ -0.7
CIRBP-244ENST00000593283 MRPL55Q7Z7F7 128 aaKnown RBP10.7□□□□□ -0.7
CIRBP-244ENST00000593283 PRR26Q8N8Z3 221 aa10.7□□□□□ -0.7
CIRBP-244ENST00000593283 TP73-AS1Q9UF72 201 aa10.7□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BKO60814 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 ATP5LO75964 103 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BJP06899 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BOP23527 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BBP33778 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BDP58876 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BCP62807 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST2H2BEQ16778 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BHQ93079 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BNQ99877 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 HIST1H2BMQ99879 126 aa10.68□□□□□ -0.7
CIRBP-244ENST00000593283 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
CIRBP-244ENST00000593283 NUPR1O60356 82 aa10.67□□□□□ -0.7
CIRBP-244ENST00000593283 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
CIRBP-244ENST00000593283 LRP2P98164 4655 aa10.65□□□□□ -0.7
CIRBP-244ENST00000593283 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 GAGE10A6NGK3 116 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 RPL37AP8A6NKH3 93 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 ZNF861PO60384 105 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 PFN2P35080 140 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
CIRBP-244ENST00000593283 TMA7Q9Y2S6 64 aaKnown RBP10.64□□□□□ -0.71
CIRBP-244ENST00000593283 NKAPP1Q8N9T2 125 aa10.63□□□□□ -0.71
CIRBP-244ENST00000593283 CHCHD1Q96BP2 118 aaKnown RBP10.63□□□□□ -0.71
CIRBP-244ENST00000593283 BCE1O60756 84 aa10.62□□□□□ -0.71
CIRBP-244ENST00000593283 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
CIRBP-244ENST00000593283 CHTOPQ9Y3Y2 248 aaKnown RBP10.62□□□□□ -0.71
CIRBP-244ENST00000593283 ZNF625Q96I27 306 aaPredicted RBP10.61□□□□□ -0.71
CIRBP-244ENST00000593283 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
CIRBP-244ENST00000593283 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
CIRBP-244ENST00000593283 SERF1AO75920 110 aa10.59□□□□□ -0.71
CIRBP-244ENST00000593283 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms