RNA–Protein interactions for RNA: ENST00000593157.5

TRMT1-222, Transcript of tRNA methyltransferase 1, human

TSL 2

Gene TRMT1, Length 2,127 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-222	ENST00000593157	FAM19A1	Q7Z5A9	133 aa		13.76	□□□□□ -0.21
TRMT1-222	ENST00000593157	C19orf73	Q9NVV2	129 aa		13.76	□□□□□ -0.21
TRMT1-222	ENST00000593157	LOC110117498	A0A087WWA1	95 aa		13.75	□□□□□ -0.21
TRMT1-222	ENST00000593157	KIAA0087	Q14695	138 aa		13.75	□□□□□ -0.21
TRMT1-222	ENST00000593157	CHD8	Q9HCK8	2581 aa		13.74	□□□□□ -0.21
TRMT1-222	ENST00000593157	RPL35A	P18077	110 aa	Known RBP	13.73	□□□□□ -0.21
TRMT1-222	ENST00000593157	LINC00575	Q6W349	94 aa		13.73	□□□□□ -0.21
TRMT1-222	ENST00000593157		Q6ZQT0	140 aa		13.73	□□□□□ -0.21
TRMT1-222	ENST00000593157	LINC00612	Q8N6U2	182 aa		13.73	□□□□□ -0.21
TRMT1-222	ENST00000593157	WFDC9	Q8NEX5	89 aa		13.73	□□□□□ -0.21
TRMT1-222	ENST00000593157	ZNF561-AS1	K7EIQ3	104 aa		13.72	□□□□□ -0.21
TRMT1-222	ENST00000593157		Q5XG85	94 aa		13.72	□□□□□ -0.21
TRMT1-222	ENST00000593157	MUC7	Q8TAX7	377 aa		13.72	□□□□□ -0.21
TRMT1-222	ENST00000593157	ITPR1	Q14643	2758 aa		13.72	□□□□□ -0.21
TRMT1-222	ENST00000593157	PRR3	P79522	188 aa	Known RBP	13.72	□□□□□ -0.21
TRMT1-222	ENST00000593157	RBM3	P98179	157 aa	Known RBP	13.72	□□□□□ -0.21
TRMT1-222	ENST00000593157	MAP1A	P78559	2803 aa	Predicted RBP	13.71	□□□□□ -0.21
TRMT1-222	ENST00000593157		H3BQ85	93 aa		13.71	□□□□□ -0.21
TRMT1-222	ENST00000593157	CD164L2	Q6UWJ8	174 aa		13.71	□□□□□ -0.21
TRMT1-222	ENST00000593157	C6orf223	Q8N319	242 aa		13.71	□□□□□ -0.21
TRMT1-222	ENST00000593157	TRAV7	A0A075B6U4	112 aa		13.7	□□□□□ -0.22
TRMT1-222	ENST00000593157	C6orf99	Q4VX62	202 aa		13.7	□□□□□ -0.22
TRMT1-222	ENST00000593157	MXRA5	Q9NR99	2828 aa		13.7	□□□□□ -0.22
TRMT1-222	ENST00000593157	IGLV1-51	P01701	117 aa		13.7	□□□□□ -0.22
TRMT1-222	ENST00000593157	PLA2G2A	P14555	144 aa		13.69	□□□□□ -0.22
TRMT1-222	ENST00000593157	WFDC10A	Q9H1F0	79 aa		13.69	□□□□□ -0.22
TRMT1-222	ENST00000593157	C2CD3	Q4AC94	2353 aa		13.69	□□□□□ -0.22
TRMT1-222	ENST00000593157	GYPE	P15421	78 aa		13.69	□□□□□ -0.22
TRMT1-222	ENST00000593157	EPM2A	B3EWF7	344 aa		13.68	□□□□□ -0.22
TRMT1-222	ENST00000593157	PDE6G	P18545	87 aa		13.68	□□□□□ -0.22
TRMT1-222	ENST00000593157	C20orf197	Q8N268	126 aa		13.68	□□□□□ -0.22
TRMT1-222	ENST00000593157	ANKRD17	O75179	2603 aa	Known RBP	13.68	□□□□□ -0.22
TRMT1-222	ENST00000593157	FAM236D	A0A1B0GTK5	79 aa		13.67	□□□□□ -0.22
TRMT1-222	ENST00000593157	FAM236C	P0DP71	79 aa		13.67	□□□□□ -0.22
TRMT1-222	ENST00000593157	LINC00482	Q8N8I6	264 aa		13.66	□□□□□ -0.22
TRMT1-222	ENST00000593157	USP9Y	O00507	2555 aa	Predicted RBP	13.66	□□□□□ -0.22
TRMT1-222	ENST00000593157	NOTCH3	Q9UM47	2321 aa		13.65	□□□□□ -0.22
TRMT1-222	ENST00000593157	DNAJC9-AS1	A6NH13	148 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	C4orf26	Q17RF5	130 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	C9orf66	Q5T8R8	295 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	ACACB	O00763	2458 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	LINC01547	P58512	204 aa	Predicted RBP	13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	KLKP1	Q107X0	134 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	PRO0255	Q9UI72	69 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	SERP1	Q9Y6X1	66 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	ZAN	Q9Y493	2812 aa		13.64	□□□□□ -0.23
TRMT1-222	ENST00000593157	DEFB130B	P0DP73	79 aa		13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157	DEFB130A	P0DP74	79 aa		13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157	CXCL6	P80162	114 aa		13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157		H7BZZ5	65 aa		13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157	DEFB113	Q30KQ7	82 aa		13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157	CLPSL2	Q6UWE3	100 aa		13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.63	□□□□□ -0.23
TRMT1-222	ENST00000593157	RNASE1	P07998	156 aa	Known RBP	13.62	□□□□□ -0.23
TRMT1-222	ENST00000593157		Q6ZVQ6	151 aa		13.61	□□□□□ -0.23
TRMT1-222	ENST00000593157		Q8NDZ9	215 aa		13.61	□□□□□ -0.23
TRMT1-222	ENST00000593157	LAMTOR3	Q9UHA4	124 aa		13.61	□□□□□ -0.23
TRMT1-222	ENST00000593157	MYO9A	B2RTY4	2548 aa		13.6	□□□□□ -0.23
TRMT1-222	ENST00000593157	LINC00269	Q8N2A0	174 aa		13.6	□□□□□ -0.23
TRMT1-222	ENST00000593157	CHD6	Q8TD26	2715 aa		13.59	□□□□□ -0.23
TRMT1-222	ENST00000593157	IGLV6-57	P01721	117 aa		13.59	□□□□□ -0.23
TRMT1-222	ENST00000593157	USP9X	Q93008	2570 aa	Predicted RBP	13.59	□□□□□ -0.23
TRMT1-222	ENST00000593157	HRCT1	Q6UXD1	115 aa		13.58	□□□□□ -0.23
TRMT1-222	ENST00000593157	C9orf116	Q5BN46	136 aa	Predicted RBP	13.58	□□□□□ -0.24
TRMT1-222	ENST00000593157	WNK1	Q9H4A3	2382 aa		13.57	□□□□□ -0.24
TRMT1-222	ENST00000593157	REG3A	Q06141	175 aa		13.57	□□□□□ -0.24
TRMT1-222	ENST00000593157		A0A0J9YWU9	116 aa		13.56	□□□□□ -0.24
TRMT1-222	ENST00000593157	IGHV4-30-4	P0DP06	118 aa		13.56	□□□□□ -0.24
TRMT1-222	ENST00000593157	C16orf95	Q9H693	158 aa		13.56	□□□□□ -0.24
TRMT1-222	ENST00000593157	HAMP	P81172	84 aa		13.55	□□□□□ -0.24
TRMT1-222	ENST00000593157	BBC3	Q96PG8	261 aa	Predicted RBP	13.55	□□□□□ -0.24
TRMT1-222	ENST00000593157		M0R2N4	97 aa		13.54	□□□□□ -0.24
TRMT1-222	ENST00000593157	AKAP9	Q99996	3911 aa		13.54	□□□□□ -0.24
TRMT1-222	ENST00000593157	ESM1	Q9NQ30	184 aa		13.54	□□□□□ -0.24
TRMT1-222	ENST00000593157	NDUFC1	O43677	76 aa		13.53	□□□□□ -0.24
TRMT1-222	ENST00000593157		Q6ZQY7	126 aa		13.53	□□□□□ -0.24
TRMT1-222	ENST00000593157	FLNC	Q14315	2725 aa		13.53	□□□□□ -0.24
TRMT1-222	ENST00000593157	ANG	P03950	147 aa	Known RBP	13.52	□□□□□ -0.24
TRMT1-222	ENST00000593157	LINC01006	Q8NI28	216 aa		13.52	□□□□□ -0.24
TRMT1-222	ENST00000593157	TRAV10	A0A0B4J240	114 aa		13.52	□□□□□ -0.25
TRMT1-222	ENST00000593157	KRTAP10-9	P60411	292 aa		13.52	□□□□□ -0.25
TRMT1-222	ENST00000593157	MRAP	Q8TCY5	172 aa		13.52	□□□□□ -0.25
TRMT1-222	ENST00000593157		X6R8D5	127 aa		13.52	□□□□□ -0.25
TRMT1-222	ENST00000593157	CFAP46	Q8IYW2	2715 aa		13.52	□□□□□ -0.25
TRMT1-222	ENST00000593157	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.51	□□□□□ -0.25
TRMT1-222	ENST00000593157	CSMD2	Q7Z408	3487 aa		13.51	□□□□□ -0.25
TRMT1-222	ENST00000593157	TRBV7-4	A0A0J9YYF1	115 aa		13.51	□□□□□ -0.25
TRMT1-222	ENST00000593157	LYRM9	A8MSI8	78 aa		13.51	□□□□□ -0.25
TRMT1-222	ENST00000593157	KRTAP1-3	Q8IUG1	177 aa		13.51	□□□□□ -0.25
TRMT1-222	ENST00000593157	EPG5	Q9HCE0	2579 aa		13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	IGLV10-54	A0A075B6I4	117 aa		13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157		A0A096LPF7	62 aa		13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	SPAG11B	Q08648	103 aa		13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	ZNF843	Q8N446	348 aa		13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	SETX	Q7Z333	2677 aa	Known RBP	13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	FBN2	P35556	2912 aa		13.5	□□□□□ -0.25
TRMT1-222	ENST00000593157	PKD1L2	Q7Z442	2459 aa		13.49	□□□□□ -0.25
TRMT1-222	ENST00000593157	UTP20	O75691	2785 aa	Known RBP	13.49	□□□□□ -0.25
TRMT1-222	ENST00000593157	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.49	□□□□□ -0.25

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