RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
DNMT1-227ENST00000592342 C10orf25Q5T742 122 aa13.3□□□□□ -0.28
DNMT1-227ENST00000592342 CHTF8P0CG12 524 aa13.29□□□□□ -0.28
DNMT1-227ENST00000592342 CXCL5P42830 114 aa13.29□□□□□ -0.28
DNMT1-227ENST00000592342 ODF1Q14990 250 aa13.29□□□□□ -0.28
DNMT1-227ENST00000592342 SCXQ7RTU7 201 aa13.29□□□□□ -0.28
DNMT1-227ENST00000592342 C6orf48Q9UBA6 75 aa13.29□□□□□ -0.28
DNMT1-227ENST00000592342 TRBV30A0A0K0K1B3 111 aa13.28□□□□□ -0.28
DNMT1-227ENST00000592342 RPL18AQ02543 176 aaKnown RBP13.28□□□□□ -0.28
DNMT1-227ENST00000592342 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
DNMT1-227ENST00000592342 A0A096LNI7 61 aa13.27□□□□□ -0.29
DNMT1-227ENST00000592342 MAJINQ3KP22 176 aa13.27□□□□□ -0.29
DNMT1-227ENST00000592342 CIRBP-AS1Q8TBR5 109 aa13.27□□□□□ -0.29
DNMT1-227ENST00000592342 LINC00474Q9P2X8 69 aa13.27□□□□□ -0.29
DNMT1-227ENST00000592342 PANO1I0J062 215 aa13.26□□□□□ -0.29
DNMT1-227ENST00000592342 SMR3BP02814 79 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-227ENST00000592342 PLNP26678 52 aa13.25□□□□□ -0.29
DNMT1-227ENST00000592342 SPACA4Q8TDM5 124 aa13.25□□□□□ -0.29
DNMT1-227ENST00000592342 IGLV5-39A0A0G2JS06 123 aa13.24□□□□□ -0.29
DNMT1-227ENST00000592342 S100A6P06703 90 aa13.24□□□□□ -0.29
DNMT1-227ENST00000592342 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
DNMT1-227ENST00000592342 CIRBPQ14011 172 aaKnown RBP13.24□□□□□ -0.29
DNMT1-227ENST00000592342 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
DNMT1-227ENST00000592342 SYS1-DBNDD2H3BUS1 97 aa13.23□□□□□ -0.29
DNMT1-227ENST00000592342 DPM2O94777 84 aa13.23□□□□□ -0.29
DNMT1-227ENST00000592342 PMCHL2Q9BQD1 86 aa13.23□□□□□ -0.29
DNMT1-227ENST00000592342 RYR1P21817 5038 aa13.22□□□□□ -0.29
DNMT1-227ENST00000592342 A0A087WYN8 130 aa13.21□□□□□ -0.29
DNMT1-227ENST00000592342 IGKCP01834 107 aa13.21□□□□□ -0.29
DNMT1-227ENST00000592342 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.29
DNMT1-227ENST00000592342 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-227ENST00000592342 Q8N1X5 172 aa13.21□□□□□ -0.29
DNMT1-227ENST00000592342 APOBP04114 4563 aaKnown RBP13.21□□□□□ -0.29
DNMT1-227ENST00000592342 S100A2P29034 98 aa13.2□□□□□ -0.3
DNMT1-227ENST00000592342 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
DNMT1-227ENST00000592342 PET117Q6UWS5 81 aa13.2□□□□□ -0.3
DNMT1-227ENST00000592342 STPG4Q8N801 248 aa13.2□□□□□ -0.3
DNMT1-227ENST00000592342 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
DNMT1-227ENST00000592342 NDUFC2-KCTD14E9PQ53 114 aa13.19□□□□□ -0.3
DNMT1-227ENST00000592342 KRTDAPP60985 99 aa13.19□□□□□ -0.3
DNMT1-227ENST00000592342 FAM229AH3BQW9 127 aa13.18□□□□□ -0.3
DNMT1-227ENST00000592342 HERVK_113P61574 105 aa13.18□□□□□ -0.3
DNMT1-227ENST00000592342 Q6ZRP5 223 aa13.18□□□□□ -0.3
DNMT1-227ENST00000592342 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
DNMT1-227ENST00000592342 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
DNMT1-227ENST00000592342 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
DNMT1-227ENST00000592342 LINC00528Q8N1L1 170 aa13.16□□□□□ -0.3
DNMT1-227ENST00000592342 PLAC8Q9NZF1 115 aa13.16□□□□□ -0.3
DNMT1-227ENST00000592342 HIST3H2BBQ8N257 126 aa13.15□□□□□ -0.3
DNMT1-227ENST00000592342 C20orf202A1L168 122 aa13.14□□□□□ -0.31
DNMT1-227ENST00000592342 Q5VSD8 79 aa13.14□□□□□ -0.31
DNMT1-227ENST00000592342 LINC01545Q5VT33 79 aa13.14□□□□□ -0.31
DNMT1-227ENST00000592342 HERC2O95714 4834 aa13.14□□□□□ -0.31
DNMT1-227ENST00000592342 DNAH8Q96JB1 4490 aa13.13□□□□□ -0.31
DNMT1-227ENST00000592342 ZNF625Q96I27 306 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-227ENST00000592342 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
DNMT1-227ENST00000592342 PLEKHB2Q96CS7 222 aa13.12□□□□□ -0.31
DNMT1-227ENST00000592342 HSPG2P98160 4391 aa13.11□□□□□ -0.31
DNMT1-227ENST00000592342 LEPROTO15243 131 aa13.11□□□□□ -0.31
DNMT1-227ENST00000592342 PFN2P35080 140 aa13.11□□□□□ -0.31
DNMT1-227ENST00000592342 KRTAP17-1Q9BYP8 105 aa13.11□□□□□ -0.31
DNMT1-227ENST00000592342 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
DNMT1-227ENST00000592342 C7orf33Q8WU49 177 aa13.1□□□□□ -0.31
DNMT1-227ENST00000592342 HIST1H2BLQ99880 126 aa13.1□□□□□ -0.31
DNMT1-227ENST00000592342 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
DNMT1-227ENST00000592342 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
DNMT1-227ENST00000592342 XAGE1AQ9HD64 81 aa13.09□□□□□ -0.31
DNMT1-227ENST00000592342 NDUFA12Q9UI09 145 aa13.09□□□□□ -0.31
DNMT1-227ENST00000592342 LGALS3P17931 250 aaKnown RBP13.08□□□□□ -0.32
DNMT1-227ENST00000592342 MYMXA0A1B0GTQ4 84 aa13.07□□□□□ -0.32
DNMT1-227ENST00000592342 J3QQQ9 107 aa13.07□□□□□ -0.32
DNMT1-227ENST00000592342 COX17Q14061 63 aa13.07□□□□□ -0.32
DNMT1-227ENST00000592342 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
DNMT1-227ENST00000592342 FAM19A5Q7Z5A7 132 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-227ENST00000592342 FAM168BA1KXE4 195 aa13.06□□□□□ -0.32
DNMT1-227ENST00000592342 HERV-K104P63124 156 aa13.06□□□□□ -0.32
DNMT1-227ENST00000592342 MEIG1Q5JSS6 88 aa13.06□□□□□ -0.32
DNMT1-227ENST00000592342 C5orf52A6NGY3 159 aa13.05□□□□□ -0.32
DNMT1-227ENST00000592342 AKR1D1P51857 326 aa13.05□□□□□ -0.32
DNMT1-227ENST00000592342 RPL37AP61513 92 aaKnown RBP13.05□□□□□ -0.32
DNMT1-227ENST00000592342 E9PLD3 99 aa13.04□□□□□ -0.32
DNMT1-227ENST00000592342 LINC00158P58513 81 aa13.04□□□□□ -0.32
DNMT1-227ENST00000592342 TSPEAR-AS2P59090 65 aa13.04□□□□□ -0.32
DNMT1-227ENST00000592342 KRTAP4-5Q9BYR2 181 aa13.04□□□□□ -0.32
DNMT1-227ENST00000592342 NMUP48645 174 aa13.03□□□□□ -0.32
DNMT1-227ENST00000592342 A0A0U1RRA0 63 aa13.02□□□□□ -0.33
DNMT1-227ENST00000592342 LINC00587B1AMM8 73 aa13.02□□□□□ -0.33
DNMT1-227ENST00000592342 PHF5AQ7RTV0 110 aaKnown RBP13.01□□□□□ -0.33
DNMT1-227ENST00000592342 M0QXV9 152 aa13□□□□□ -0.33
DNMT1-227ENST00000592342 ATOH7Q8N100 152 aa13□□□□□ -0.33
DNMT1-227ENST00000592342 SMIM13P0DJ93 91 aa12.99□□□□□ -0.33
DNMT1-227ENST00000592342 SERTAD4-AS1Q5TG53 156 aa12.98□□□□□ -0.33
DNMT1-227ENST00000592342 SND1-IT1Q9HBX3 110 aa12.98□□□□□ -0.33
DNMT1-227ENST00000592342 UBE2BP63146 152 aa12.96□□□□□ -0.33
DNMT1-227ENST00000592342 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
DNMT1-227ENST00000592342 INAFM2P0DMQ5 153 aa12.95□□□□□ -0.34
DNMT1-227ENST00000592342 PLA2G2DQ9UNK4 145 aa12.95□□□□□ -0.34
DNMT1-227ENST00000592342 TMA7Q9Y2S6 64 aaKnown RBP12.95□□□□□ -0.34
DNMT1-227ENST00000592342 C22orf24Q9Y442 160 aa12.95□□□□□ -0.34
DNMT1-227ENST00000592342 FAT1Q14517 4588 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms