RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	MYCBP2	O75592	4640 aa		14.74	□□□□□ -0.05
CIRBP-231	ENST00000591097	TOMM7	Q9P0U1	55 aa		14.73	□□□□□ -0.05
CIRBP-231	ENST00000591097	PRSS2	P07478	247 aa		14.72	□□□□□ -0.05
CIRBP-231	ENST00000591097	STPG4	Q8N801	248 aa		14.72	□□□□□ -0.05
CIRBP-231	ENST00000591097	TRBV30	A0A0K0K1B3	111 aa		14.71	□□□□□ -0.05
CIRBP-231	ENST00000591097	NUPR1	O60356	82 aa		14.71	□□□□□ -0.05
CIRBP-231	ENST00000591097	TLX1NB	P0CAT3	122 aa		14.71	□□□□□ -0.05
CIRBP-231	ENST00000591097	GAGE2B	Q13066	116 aa		14.71	□□□□□ -0.05
CIRBP-231	ENST00000591097	IFI27L1	Q96BM0	104 aa		14.71	□□□□□ -0.05
CIRBP-231	ENST00000591097	PLA2G1B	P04054	148 aa	Known RBP	14.71	□□□□□ -0.06
CIRBP-231	ENST00000591097	C6orf226	Q5I0X4	101 aa		14.71	□□□□□ -0.06
CIRBP-231	ENST00000591097	SPINK8	P0C7L1	97 aa		14.7	□□□□□ -0.06
CIRBP-231	ENST00000591097	ZNF22	P17026	224 aa	Predicted RBP	14.7	□□□□□ -0.06
CIRBP-231	ENST00000591097	RPL18A	Q02543	176 aa	Known RBP	14.7	□□□□□ -0.06
CIRBP-231	ENST00000591097	TRAV12-1	A0A0B4J245	112 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BK	O60814	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BJ	P06899	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BO	P23527	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BB	P33778	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BD	P58876	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BC	P62807	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST2H2BE	Q16778	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097		Q6ZRP5	223 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BH	Q93079	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BN	Q99877	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	HIST1H2BM	Q99879	126 aa		14.69	□□□□□ -0.06
CIRBP-231	ENST00000591097	C11orf86	A6NJI1	115 aa		14.68	□□□□□ -0.06
CIRBP-231	ENST00000591097		H3BRM9	83 aa		14.68	□□□□□ -0.06
CIRBP-231	ENST00000591097	CKS1B	P61024	79 aa		14.68	□□□□□ -0.06
CIRBP-231	ENST00000591097	FLG2	Q5D862	2391 aa	Predicted RBP	14.68	□□□□□ -0.06
CIRBP-231	ENST00000591097	IGLV5-39	A0A0G2JS06	123 aa		14.66	□□□□□ -0.06
CIRBP-231	ENST00000591097	C9orf116	Q5BN46	136 aa	Predicted RBP	14.66	□□□□□ -0.06
CIRBP-231	ENST00000591097	COX7B2	Q8TF08	81 aa		14.66	□□□□□ -0.06
CIRBP-231	ENST00000591097	CHTOP	Q9Y3Y2	248 aa	Known RBP	14.66	□□□□□ -0.06
CIRBP-231	ENST00000591097	INAFM2	P0DMQ5	153 aa		14.66	□□□□□ -0.06
CIRBP-231	ENST00000591097	CXCL5	P42830	114 aa		14.66	□□□□□ -0.06
CIRBP-231	ENST00000591097		F8VRH5	84 aa		14.65	□□□□□ -0.06
CIRBP-231	ENST00000591097	LEPROTL1	O95214	131 aa		14.65	□□□□□ -0.06
CIRBP-231	ENST00000591097		A0A1W2PNN7	141 aa		14.64	□□□□□ -0.07
CIRBP-231	ENST00000591097	NDUFC2-KCTD14	E9PQ53	114 aa		14.64	□□□□□ -0.07
CIRBP-231	ENST00000591097	ATP6V1G1	O75348	118 aa		14.64	□□□□□ -0.07
CIRBP-231	ENST00000591097	S100A1	P23297	94 aa		14.63	□□□□□ -0.07
CIRBP-231	ENST00000591097	RPL37A	P61513	92 aa	Known RBP	14.63	□□□□□ -0.07
CIRBP-231	ENST00000591097	PKHD1L1	Q86WI1	4243 aa		14.61	□□□□□ -0.07
CIRBP-231	ENST00000591097	TMEM170B	Q5T4T1	132 aa		14.61	□□□□□ -0.07
CIRBP-231	ENST00000591097	ODF1	Q14990	250 aa		14.6	□□□□□ -0.07
CIRBP-231	ENST00000591097	GAGE2E	Q4V326	116 aa		14.6	□□□□□ -0.07
CIRBP-231	ENST00000591097	GAGE2D	Q9UEU5	116 aa		14.6	□□□□□ -0.07
CIRBP-231	ENST00000591097	HSPB8	Q9UJY1	196 aa		14.59	□□□□□ -0.07
CIRBP-231	ENST00000591097	C7orf33	Q8WU49	177 aa		14.58	□□□□□ -0.08
CIRBP-231	ENST00000591097	FABP4	P15090	132 aa		14.57	□□□□□ -0.08
CIRBP-231	ENST00000591097	FAM168B	A1KXE4	195 aa		14.56	□□□□□ -0.08
CIRBP-231	ENST00000591097	C9orf129	Q5T035	196 aa	Known RBP	14.56	□□□□□ -0.08
CIRBP-231	ENST00000591097	TMEM223	A0PJW6	202 aa		14.56	□□□□□ -0.08
CIRBP-231	ENST00000591097		H0Y8G0	127 aa		14.56	□□□□□ -0.08
CIRBP-231	ENST00000591097	KRTAP7-1	Q8IUC3	87 aa		14.56	□□□□□ -0.08
CIRBP-231	ENST00000591097	COA6	Q5JTJ3	125 aa	Known RBP	14.55	□□□□□ -0.08
CIRBP-231	ENST00000591097	HNRNPA3	P51991	378 aa	Known RBP	14.54	□□□□□ -0.08
CIRBP-231	ENST00000591097	LRP1	Q07954	4544 aa	Known RBP	14.53	□□□□□ -0.08
CIRBP-231	ENST00000591097	PRR3	P79522	188 aa	Known RBP	14.51	□□□□□ -0.09
CIRBP-231	ENST00000591097	PHF5A	Q7RTV0	110 aa	Known RBP	14.5	□□□□□ -0.09
CIRBP-231	ENST00000591097	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	14.5	□□□□□ -0.09
CIRBP-231	ENST00000591097	ZNF625	Q96I27	306 aa	Predicted RBP	14.5	□□□□□ -0.09
CIRBP-231	ENST00000591097	XAGE1A	Q9HD64	81 aa		14.5	□□□□□ -0.09
CIRBP-231	ENST00000591097	MAP1LC3C	Q9BXW4	147 aa		14.49	□□□□□ -0.09
CIRBP-231	ENST00000591097	DMBT1	Q9UGM3	2413 aa	Predicted RBP	14.48	□□□□□ -0.09
CIRBP-231	ENST00000591097	PLN	P26678	52 aa		14.48	□□□□□ -0.09
CIRBP-231	ENST00000591097	FAT3	Q8TDW7	4589 aa		14.48	□□□□□ -0.09
CIRBP-231	ENST00000591097	SFTA2	Q6UW10	78 aa		14.47	□□□□□ -0.09
CIRBP-231	ENST00000591097	PMCHL2	Q9BQD1	86 aa		14.47	□□□□□ -0.09
CIRBP-231	ENST00000591097	DPM2	O94777	84 aa		14.46	□□□□□ -0.1
CIRBP-231	ENST00000591097	SERTAD4-AS1	Q5TG53	156 aa		14.46	□□□□□ -0.1
CIRBP-231	ENST00000591097	SYS1-DBNDD2	H3BUS1	97 aa		14.44	□□□□□ -0.1
CIRBP-231	ENST00000591097		M0QXV9	152 aa		14.44	□□□□□ -0.1
CIRBP-231	ENST00000591097	ERG28	Q9UKR5	140 aa		14.44	□□□□□ -0.1
CIRBP-231	ENST00000591097	KRTAP11-1	Q8IUC1	163 aa		14.43	□□□□□ -0.1
CIRBP-231	ENST00000591097	IGKC	P01834	107 aa		14.42	□□□□□ -0.1
CIRBP-231	ENST00000591097	COX17	Q14061	63 aa		14.42	□□□□□ -0.1
CIRBP-231	ENST00000591097	PFN2	P35080	140 aa		14.41	□□□□□ -0.1
CIRBP-231	ENST00000591097	PSORS1C2	Q9UIG4	136 aa		14.41	□□□□□ -0.1
CIRBP-231	ENST00000591097	HERC1	Q15751	4861 aa		14.4	□□□□□ -0.1
CIRBP-231	ENST00000591097	TSPEAR-AS2	P59090	65 aa		14.39	□□□□□ -0.11
CIRBP-231	ENST00000591097	LINC01545	Q5VT33	79 aa		14.38	□□□□□ -0.11
CIRBP-231	ENST00000591097	PLA2G2D	Q9UNK4	145 aa		14.38	□□□□□ -0.11
CIRBP-231	ENST00000591097	C22orf24	Q9Y442	160 aa		14.38	□□□□□ -0.11
CIRBP-231	ENST00000591097	SND1-IT1	Q9HBX3	110 aa		14.37	□□□□□ -0.11
CIRBP-231	ENST00000591097	KRTAP29-1	A8MX34	341 aa	Predicted RBP	14.36	□□□□□ -0.11
CIRBP-231	ENST00000591097	LEPROT	O15243	131 aa		14.36	□□□□□ -0.11
CIRBP-231	ENST00000591097	C3orf79	P0CE67	100 aa		14.36	□□□□□ -0.11
CIRBP-231	ENST00000591097	PET117	Q6UWS5	81 aa		14.36	□□□□□ -0.11
CIRBP-231	ENST00000591097	NDUFA12	Q9UI09	145 aa		14.36	□□□□□ -0.11
CIRBP-231	ENST00000591097	TP73-AS1	Q9UF72	201 aa		14.36	□□□□□ -0.11
CIRBP-231	ENST00000591097	HERVK_113	P61574	105 aa		14.34	□□□□□ -0.11
CIRBP-231	ENST00000591097	HERV-K104	P63124	156 aa		14.34	□□□□□ -0.11
CIRBP-231	ENST00000591097	SRSF9	Q13242	221 aa	Known RBP eCLIP	14.34	□□□□□ -0.11
CIRBP-231	ENST00000591097	PLEKHB2	Q96CS7	222 aa		14.34	□□□□□ -0.11
CIRBP-231	ENST00000591097	IGLV5-37	A0A075B6J1	123 aa		14.33	□□□□□ -0.12
CIRBP-231	ENST00000591097		J3QQQ9	107 aa		14.32	□□□□□ -0.12
CIRBP-231	ENST00000591097	UBE2B	P63146	152 aa		14.32	□□□□□ -0.12

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