RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
DDX39A-212ENST00000590260 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
DDX39A-212ENST00000590260 SMIM1B2RUZ4 78 aa11.31□□□□□ -0.6
DDX39A-212ENST00000590260 TRBV30A0A0K0K1B3 111 aa11.3□□□□□ -0.6
DDX39A-212ENST00000590260 SEC11AP67812 179 aa11.3□□□□□ -0.6
DDX39A-212ENST00000590260 PMVKQ15126 192 aa11.3□□□□□ -0.6
DDX39A-212ENST00000590260 Q8IZM0 81 aa11.3□□□□□ -0.6
DDX39A-212ENST00000590260 GEMIN7Q9H840 131 aaKnown RBP11.3□□□□□ -0.6
DDX39A-212ENST00000590260 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
DDX39A-212ENST00000590260 PHF5AQ7RTV0 110 aaKnown RBP11.29□□□□□ -0.6
DDX39A-212ENST00000590260 J3QL48 77 aa11.28□□□□□ -0.6
DDX39A-212ENST00000590260 OXTP01178 125 aa11.28□□□□□ -0.6
DDX39A-212ENST00000590260 HBDP02042 147 aa11.28□□□□□ -0.6
DDX39A-212ENST00000590260 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
DDX39A-212ENST00000590260 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
DDX39A-212ENST00000590260 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
DDX39A-212ENST00000590260 GAGE2EQ4V326 116 aa11.27□□□□□ -0.61
DDX39A-212ENST00000590260 GAGE2DQ9UEU5 116 aa11.27□□□□□ -0.61
DDX39A-212ENST00000590260 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
DDX39A-212ENST00000590260 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
DDX39A-212ENST00000590260 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
DDX39A-212ENST00000590260 PRSS2P07478 247 aa11.25□□□□□ -0.61
DDX39A-212ENST00000590260 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
DDX39A-212ENST00000590260 IGLC3P0DOY3 106 aa11.25□□□□□ -0.61
DDX39A-212ENST00000590260 PACRGQ96M98 296 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-212ENST00000590260 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX39A-212ENST00000590260 TRGC2P03986 189 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 LINC00310P59036 64 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 RAB5BP61020 215 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 CKS1BP61024 79 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 TNXBP22105 4242 aa11.23□□□□□ -0.61
DDX39A-212ENST00000590260 F8VRH5 84 aa11.22□□□□□ -0.61
DDX39A-212ENST00000590260 ZNF22P17026 224 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-212ENST00000590260 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-212ENST00000590260 COLCA2A8K830 154 aa11.21□□□□□ -0.61
DDX39A-212ENST00000590260 NDUFA6P56556 154 aa11.21□□□□□ -0.61
DDX39A-212ENST00000590260 CHCHD1Q96BP2 118 aaKnown RBP11.21□□□□□ -0.61
DDX39A-212ENST00000590260 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
DDX39A-212ENST00000590260 C11orf86A6NJI1 115 aa11.2□□□□□ -0.62
DDX39A-212ENST00000590260 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
DDX39A-212ENST00000590260 ATP5LO75964 103 aa11.19□□□□□ -0.62
DDX39A-212ENST00000590260 CXCL5P42830 114 aa11.18□□□□□ -0.62
DDX39A-212ENST00000590260 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
DDX39A-212ENST00000590260 FAM19A2Q8N3H0 131 aa11.18□□□□□ -0.62
DDX39A-212ENST00000590260 XAGE1AQ9HD64 81 aa11.18□□□□□ -0.62
DDX39A-212ENST00000590260 M0QXV9 152 aa11.16□□□□□ -0.62
DDX39A-212ENST00000590260 NUPR1O60356 82 aa11.16□□□□□ -0.62
DDX39A-212ENST00000590260 SPINK6Q6UWN8 80 aa11.16□□□□□ -0.62
DDX39A-212ENST00000590260 SCO1O75880 301 aa11.15□□□□□ -0.62
DDX39A-212ENST00000590260 HMCN2Q8NDA2 5059 aa11.15□□□□□ -0.62
DDX39A-212ENST00000590260 H3BRM9 83 aa11.14□□□□□ -0.63
DDX39A-212ENST00000590260 SERF1AO75920 110 aa11.14□□□□□ -0.63
DDX39A-212ENST00000590260 C1orf137Q5JT78 98 aa11.14□□□□□ -0.63
DDX39A-212ENST00000590260 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
DDX39A-212ENST00000590260 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
DDX39A-212ENST00000590260 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
DDX39A-212ENST00000590260 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
DDX39A-212ENST00000590260 HSBP1O75506 76 aa11.11□□□□□ -0.63
DDX39A-212ENST00000590260 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
DDX39A-212ENST00000590260 IGLV7-43P04211 117 aa11.1□□□□□ -0.63
DDX39A-212ENST00000590260 ODF1Q14990 250 aa11.1□□□□□ -0.63
DDX39A-212ENST00000590260 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
DDX39A-212ENST00000590260 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
DDX39A-212ENST00000590260 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-212ENST00000590260 KRTAP10-8P60410 259 aa11.07□□□□□ -0.64
DDX39A-212ENST00000590260 UBE2BP63146 152 aa11.06□□□□□ -0.64
DDX39A-212ENST00000590260 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
DDX39A-212ENST00000590260 PFN2P35080 140 aa11.05□□□□□ -0.64
DDX39A-212ENST00000590260 Q8NDZ9 215 aa11.05□□□□□ -0.64
DDX39A-212ENST00000590260 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
DDX39A-212ENST00000590260 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
DDX39A-212ENST00000590260 IGLV5-37A0A075B6J1 123 aa11.04□□□□□ -0.64
DDX39A-212ENST00000590260 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
DDX39A-212ENST00000590260 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
DDX39A-212ENST00000590260 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
DDX39A-212ENST00000590260 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
DDX39A-212ENST00000590260 H0Y8G0 127 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BKO60814 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BJP06899 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BOP23527 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BBP33778 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BDP58876 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BCP62807 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
DDX39A-212ENST00000590260 FABP4P15090 132 aa11.01□□□□□ -0.65
DDX39A-212ENST00000590260 H0Y9J4 135 aa11□□□□□ -0.65
DDX39A-212ENST00000590260 KRTAP1-4P0C5Y4 121 aa11□□□□□ -0.65
DDX39A-212ENST00000590260 VPREB1P12018 145 aa11□□□□□ -0.65
DDX39A-212ENST00000590260 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
DDX39A-212ENST00000590260 GAGE10A6NGK3 116 aa10.99□□□□□ -0.65
DDX39A-212ENST00000590260 RPL37AP8A6NKH3 93 aa10.99□□□□□ -0.65
DDX39A-212ENST00000590260 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
DDX39A-212ENST00000590260 COX17Q14061 63 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms