RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 Q8IZM0 81 aa9.25□□□□□ -0.93
CXXC1-213ENST00000590234 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
CXXC1-213ENST00000590234 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
CXXC1-213ENST00000590234 HSBP1O75506 76 aa9.24□□□□□ -0.93
CXXC1-213ENST00000590234 CKS1BP61024 79 aa9.24□□□□□ -0.93
CXXC1-213ENST00000590234 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
CXXC1-213ENST00000590234 C6orf226Q5I0X4 101 aa9.24□□□□□ -0.93
CXXC1-213ENST00000590234 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
CXXC1-213ENST00000590234 SRRM2Q9UQ35 2752 aaKnown RBP9.22□□□□□ -0.93
CXXC1-213ENST00000590234 H3BRM9 83 aa9.22□□□□□ -0.93
CXXC1-213ENST00000590234 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
CXXC1-213ENST00000590234 KRTAP10-4P60372 401 aaPredicted RBP9.22□□□□□ -0.93
CXXC1-213ENST00000590234 C7orf33Q8WU49 177 aa9.22□□□□□ -0.93
CXXC1-213ENST00000590234 SERF1AO75920 110 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 SPINK8P0C7L1 97 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 CXCL5P42830 114 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 Q6ZRP5 223 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 FAM19A2Q8N3H0 131 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 COX7B2Q8TF08 81 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 IFI27L1Q96BM0 104 aa9.21□□□□□ -0.94
CXXC1-213ENST00000590234 F8VRH5 84 aa9.19□□□□□ -0.94
CXXC1-213ENST00000590234 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
CXXC1-213ENST00000590234 LINC00310P59036 64 aa9.19□□□□□ -0.94
CXXC1-213ENST00000590234 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
CXXC1-213ENST00000590234 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
CXXC1-213ENST00000590234 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
CXXC1-213ENST00000590234 CHTOPQ9Y3Y2 248 aaKnown RBP9.19□□□□□ -0.94
CXXC1-213ENST00000590234 TRAV12-1A0A0B4J245 112 aa9.18□□□□□ -0.94
CXXC1-213ENST00000590234 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
CXXC1-213ENST00000590234 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
CXXC1-213ENST00000590234 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
CXXC1-213ENST00000590234 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
CXXC1-213ENST00000590234 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
CXXC1-213ENST00000590234 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.94
CXXC1-213ENST00000590234 NUPR1O60356 82 aa9.15□□□□□ -0.94
CXXC1-213ENST00000590234 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
CXXC1-213ENST00000590234 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
CXXC1-213ENST00000590234 FAM168BA1KXE4 195 aa9.13□□□□□ -0.95
CXXC1-213ENST00000590234 H0Y8G0 127 aa9.13□□□□□ -0.95
CXXC1-213ENST00000590234 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
CXXC1-213ENST00000590234 FAM19A5Q7Z5A7 132 aaPredicted RBP9.13□□□□□ -0.95
CXXC1-213ENST00000590234 HSPB8Q9UJY1 196 aa9.13□□□□□ -0.95
CXXC1-213ENST00000590234 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
CXXC1-213ENST00000590234 FABP4P15090 132 aa9.12□□□□□ -0.95
CXXC1-213ENST00000590234 PRR3P79522 188 aaKnown RBP9.12□□□□□ -0.95
CXXC1-213ENST00000590234 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
CXXC1-213ENST00000590234 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
CXXC1-213ENST00000590234 ODF1Q14990 250 aa9.11□□□□□ -0.95
CXXC1-213ENST00000590234 TMEM223A0PJW6 202 aa9.1□□□□□ -0.95
CXXC1-213ENST00000590234 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
CXXC1-213ENST00000590234 M0QXV9 152 aa9.08□□□□□ -0.96
CXXC1-213ENST00000590234 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
CXXC1-213ENST00000590234 KRTAP7-1Q8IUC3 87 aa9.08□□□□□ -0.96
CXXC1-213ENST00000590234 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
CXXC1-213ENST00000590234 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
CXXC1-213ENST00000590234 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
CXXC1-213ENST00000590234 PLNP26678 52 aa9.06□□□□□ -0.96
CXXC1-213ENST00000590234 PFN2P35080 140 aa9.06□□□□□ -0.96
CXXC1-213ENST00000590234 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
CXXC1-213ENST00000590234 PSORS1C2Q9UIG4 136 aa9.06□□□□□ -0.96
CXXC1-213ENST00000590234 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
CXXC1-213ENST00000590234 DMBT1Q9UGM3 2413 aaPredicted RBP9.06□□□□□ -0.96
CXXC1-213ENST00000590234 J3QL48 77 aa9.05□□□□□ -0.96
CXXC1-213ENST00000590234 UBE2BP63146 152 aa9.05□□□□□ -0.96
CXXC1-213ENST00000590234 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
CXXC1-213ENST00000590234 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
CXXC1-213ENST00000590234 DPM2O94777 84 aa9.04□□□□□ -0.96
CXXC1-213ENST00000590234 COX17Q14061 63 aa9.04□□□□□ -0.96
CXXC1-213ENST00000590234 PMCHL2Q9BQD1 86 aa9.04□□□□□ -0.96
CXXC1-213ENST00000590234 OXTP01178 125 aa9.03□□□□□ -0.96
CXXC1-213ENST00000590234 IGKCP01834 107 aa9.03□□□□□ -0.96
CXXC1-213ENST00000590234 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
CXXC1-213ENST00000590234 C22orf24Q9Y442 160 aa9.03□□□□□ -0.96
CXXC1-213ENST00000590234 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
CXXC1-213ENST00000590234 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
CXXC1-213ENST00000590234 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
CXXC1-213ENST00000590234 HERVK_113P61574 105 aa9.01□□□□□ -0.97
CXXC1-213ENST00000590234 LBHQ53QV2 105 aaPredicted RBP9.01□□□□□ -0.97
CXXC1-213ENST00000590234 SPINK6Q6UWN8 80 aa9.01□□□□□ -0.97
CXXC1-213ENST00000590234 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
CXXC1-213ENST00000590234 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
CXXC1-213ENST00000590234 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
CXXC1-213ENST00000590234 MRPL55Q7Z7F7 128 aaKnown RBP9□□□□□ -0.97
CXXC1-213ENST00000590234 LEPROTO15243 131 aa8.99□□□□□ -0.97
CXXC1-213ENST00000590234 LINC00158P58513 81 aa8.99□□□□□ -0.97
CXXC1-213ENST00000590234 HERV-K104P63124 156 aa8.99□□□□□ -0.97
CXXC1-213ENST00000590234 SRSF9Q13242 221 aaKnown RBP eCLIP8.99□□□□□ -0.97
CXXC1-213ENST00000590234 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
CXXC1-213ENST00000590234 SND1-IT1Q9HBX3 110 aa8.99□□□□□ -0.97
CXXC1-213ENST00000590234 NDUFA12Q9UI09 145 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms